RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 CNNM3Q8NE01 707 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 TRIM75PA6NK02 468 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 UBAP1LF5GYI3 381 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 LDHCP07864 332 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 IL1R1P14778 569 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 PRDX5P30044 214 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 KIF5BP33176 963 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CCZ1BP86790 482 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CCZ1P86791 482 aaPredicted RBP12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 NFIXQ14938 502 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 BICDL1Q6ZP65 573 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 ZNF804AQ7Z570 1209 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 SH3RF1Q7Z6J0 888 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CTCFLQ8NI51 663 aaPredicted RBP12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 KCNJ14Q9UNX9 436 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 UBE2Q2LH0YL09 131 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 ATP2B4P23634 1241 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 GNAQP50148 359 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CHAF1AQ13111 956 aaPredicted RBP12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 SEMA3FQ13275 785 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 PFKFB3Q16875 520 aaPredicted RBP12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 GALNT17Q6IS24 598 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 RCSD1Q6JBY9 416 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 NUP133Q8WUM0 1156 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 PAXBP1Q9Y5B6 917 aa12.29□□□□□ -0.44
TRAF3IP2-201ENST00000340026 KIF2AO00139 706 aaPredicted RBP12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CTIFO43310 598 aaKnown RBP12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 BAG3O95817 575 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 NOVP48745 357 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 MORC3Q14149 939 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 AMIGO3Q86WK7 504 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CNBD1Q8NA66 436 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CLIC6Q96NY7 704 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 PDCL3Q9H2J4 239 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 PCDHB6Q9Y5E3 794 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 LDHBP07195 334 aaKnown RBP12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 SMARCA1P28370 1054 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 NR5A1Q13285 461 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 POSTNQ15063 836 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 DNTTIP2Q5QJE6 756 aaKnown RBP12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 OLFM4Q6UX06 510 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 FOXP4Q8IVH2 680 aaPredicted RBP12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 DAGLBQ8NCG7 672 aa12.28□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CALML3P27482 149 aa12.27□□□□□ -0.44
TRAF3IP2-201ENST00000340026 ERCC5P28715 1186 aaPredicted RBP12.27□□□□□ -0.44
TRAF3IP2-201ENST00000340026 ATP2C1P98194 919 aaPredicted RBP12.27□□□□□ -0.44
TRAF3IP2-201ENST00000340026 LRMPQ12912 555 aa12.27□□□□□ -0.44
TRAF3IP2-201ENST00000340026 ARL6IP4Q66PJ3 421 aaKnown RBP12.27□□□□□ -0.44
TRAF3IP2-201ENST00000340026 NYAP1Q6ZVC0 841 aa12.27□□□□□ -0.44
TRAF3IP2-201ENST00000340026 DZIP1Q86YF9 867 aaKnown RBP12.27□□□□□ -0.44
TRAF3IP2-201ENST00000340026 ENOX1Q8TC92 643 aaKnown RBP12.27□□□□□ -0.44
TRAF3IP2-201ENST00000340026 LZTS2Q9BRK4 669 aa12.27□□□□□ -0.44
TRAF3IP2-201ENST00000340026 ZNF287Q9HBT7 754 aa12.27□□□□□ -0.44
TRAF3IP2-201ENST00000340026 PCDHA5Q9Y5H7 936 aa12.27□□□□□ -0.44
TRAF3IP2-201ENST00000340026 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.45
TRAF3IP2-201ENST00000340026 BBOX1O75936 387 aa12.27□□□□□ -0.45
TRAF3IP2-201ENST00000340026 PLEKHA8P1O95397 391 aa12.27□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SCG2P13521 617 aa12.27□□□□□ -0.45
TRAF3IP2-201ENST00000340026 PRR5LQ6MZQ0 368 aa12.27□□□□□ -0.45
TRAF3IP2-201ENST00000340026 TXNRD3Q86VQ6 643 aa12.27□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SRBD1Q8N5C6 995 aaKnown RBP12.27□□□□□ -0.45
TRAF3IP2-201ENST00000340026 OXER1Q8TDS5 423 aa12.27□□□□□ -0.45
TRAF3IP2-201ENST00000340026 CRAMP1Q96RY5 1269 aa12.27□□□□□ -0.45
TRAF3IP2-201ENST00000340026 TFCP2L1Q9NZI6 479 aa12.27□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SUGT1Q9Y2Z0 365 aa12.27□□□□□ -0.45
TRAF3IP2-201ENST00000340026 FANCCQ00597 558 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 PNOCQ13519 176 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 GRM4Q14833 912 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 CCDC112Q8NEF3 446 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 XPO4Q9C0E2 1151 aaKnown RBP12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 CABP5Q9NP86 173 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 GAKO14976 1311 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 FAM205AQ6ZU69 1335 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 CYP2D7A0A087X1C5 515 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 GPR75-ASB3A0A0A6YYF3 556 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SLFN14P0C7P3 912 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 PLCG2P16885 1265 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 ZNF18P17022 549 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 KCNQ4P56696 695 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 AMOTL1Q8IY63 956 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 V9GY48 417 aaPredicted RBP12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 PLIN4Q96Q06 1357 aa12.26□□□□□ -0.45
TRAF3IP2-201ENST00000340026 FAM196AQ6ZSG2 479 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 C17orf53Q8N3J3 647 aaPredicted RBP12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 MPNDQ8N594 471 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 TBC1D22AQ8WUA7 517 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 ERCC4Q92889 916 aaPredicted RBP12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 RTFDC1Q9BY42 306 aaPredicted RBP12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 TMX1Q9H3N1 280 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 VPS54Q9P1Q0 977 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 MAN1B1Q9UKM7 699 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SMIM22K7EJ46 135 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 M0R2N6 131 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SKILP12757 684 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 GYS1P13807 737 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 BMP6P22004 513 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 FCHSD1Q86WN1 690 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms