RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 USP50Q70EL3 339 aaPredicted RBP9.16□□□□□ -0.94
TMC1-202ENST00000340019 MICU3Q86XE3 530 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 RAB11FIP4Q86YS3 637 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 SMARCC2Q8TAQ2 1214 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 MYL10Q9BUA6 226 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 TRIM34Q9BYJ4 488 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.16□□□□□ -0.94
TMC1-202ENST00000340019 MTMR4Q9NYA4 1195 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 DDAH1O94760 285 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 RXRAP19793 462 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 CDC27P30260 824 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 METAP2P50579 478 aaKnown RBP eCLIP9.16□□□□□ -0.94
TMC1-202ENST00000340019 NSUN7Q8NE18 718 aaKnown RBP9.16□□□□□ -0.94
TMC1-202ENST00000340019 NAP1L2Q9ULW6 460 aaPredicted RBP9.16□□□□□ -0.94
TMC1-202ENST00000340019 PPP2R3BQ9Y5P8 575 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 ATAD5Q96QE3 1844 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 EPHX2P34913 555 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 JAG1P78504 1218 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 NTRK3Q16288 839 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 SHROOM1Q2M3G4 852 aaPredicted RBP9.16□□□□□ -0.94
TMC1-202ENST00000340019 SYNE3Q6ZMZ3 975 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 CATIPQ7Z7H3 387 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 CHMP4CQ96CF2 233 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 TMEM47Q9BQJ4 181 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 CIZ1Q9ULV3 898 aaPredicted RBP9.16□□□□□ -0.94
TMC1-202ENST00000340019 SMC3Q9UQE7 1217 aa9.16□□□□□ -0.94
TMC1-202ENST00000340019 DHX16O60231 1041 aaKnown RBP9.15□□□□□ -0.94
TMC1-202ENST00000340019 JAK2O60674 1132 aa9.15□□□□□ -0.94
TMC1-202ENST00000340019 GJB2P29033 226 aa9.15□□□□□ -0.94
TMC1-202ENST00000340019 GUCY1A2P33402 732 aa9.15□□□□□ -0.94
TMC1-202ENST00000340019 MIGA2Q7L4E1 593 aa9.15□□□□□ -0.94
TMC1-202ENST00000340019 STX8Q9UNK0 236 aa9.15□□□□□ -0.94
TMC1-202ENST00000340019 IQCA1LA6NCM1 817 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 GOLGA8AA7E2F4 631 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 PHF20L1A8MW92 1017 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 DTNBO60941 627 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 CALM1P0DP23 149 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 CALM2P0DP24 149 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 CALM3P0DP25 149 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 ADD1P35611 737 aaKnown RBP9.15□□□□□ -0.95
TMC1-202ENST00000340019 PPP2R5BQ15173 497 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 ABCB5Q2M3G0 1257 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 NBPF12Q5TAG4 269 aaPredicted RBP9.15□□□□□ -0.95
TMC1-202ENST00000340019 TMEM179Q6ZVK1 233 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 FANCBQ8NB91 859 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 PNMA1Q8ND90 353 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 ZC3H15Q8WU90 426 aaKnown RBP9.15□□□□□ -0.95
TMC1-202ENST00000340019 MAP3K14Q99558 947 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 TAF1DQ9H5J8 278 aaPredicted RBP9.15□□□□□ -0.95
TMC1-202ENST00000340019 KAT14Q9H8E8 782 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 CHMP5Q9NZZ3 219 aa9.15□□□□□ -0.95
TMC1-202ENST00000340019 SSC5DA1L4H1 1573 aa9.14□□□□□ -0.95
TMC1-202ENST00000340019 MPHOSPH10O00566 681 aaKnown RBP9.14□□□□□ -0.95
TMC1-202ENST00000340019 GDF11O95390 407 aa9.14□□□□□ -0.95
TMC1-202ENST00000340019 TTLL1O95922 423 aa9.14□□□□□ -0.95
TMC1-202ENST00000340019 TOP1P11387 765 aaKnown RBP9.14□□□□□ -0.95
TMC1-202ENST00000340019 SIAH1Q8IUQ4 282 aa9.14□□□□□ -0.95
TMC1-202ENST00000340019 CCDC144CPQ8IYA2 1237 aa9.14□□□□□ -0.95
TMC1-202ENST00000340019 PTPDC1A2A3K4 754 aa9.14□□□□□ -0.95
TMC1-202ENST00000340019 RTN1Q16799 776 aa9.14□□□□□ -0.95
TMC1-202ENST00000340019 CLEC10AQ8IUN9 316 aa9.14□□□□□ -0.95
TMC1-202ENST00000340019 NUP133Q8WUM0 1156 aa9.14□□□□□ -0.95
TMC1-202ENST00000340019 KANSL2Q9H9L4 492 aa9.14□□□□□ -0.95
TMC1-202ENST00000340019 GH2P01242 217 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 FDPSP14324 419 aaKnown RBP9.13□□□□□ -0.95
TMC1-202ENST00000340019 CAP2P40123 477 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 PKP1Q13835 747 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 PPP4R3BQ5MIZ7 849 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 MKL1Q969V6 931 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 PAPPA2Q9BXP8 1791 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 CCDC196A0A1B0GTZ2 297 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 HMGN5P82970 282 aaKnown RBP9.13□□□□□ -0.95
TMC1-202ENST00000340019 SEPT2Q15019 361 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 NBPF11Q86T75 865 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 DCPSQ96C86 337 aaKnown RBP9.13□□□□□ -0.95
TMC1-202ENST00000340019 RBM28Q9NW13 759 aaKnown RBP9.13□□□□□ -0.95
TMC1-202ENST00000340019 NYAP2Q9P242 653 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 ZBTB21Q9ULJ3 1066 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 DOCK1Q14185 1865 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 CPLX1O14810 134 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 SNHG28P0DPA3 235 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 IFNAR1P17181 557 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 FUT2Q10981 343 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 GRM4Q14833 912 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 PRAMEF18Q5VWM3 479 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 HOOK2Q96ED9 719 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 CLIP2Q9UDT6 1046 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 ZNF112Q9UJU3 913 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 ZDHHC9Q9Y397 364 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 MYH6P13533 1939 aa9.13□□□□□ -0.95
TMC1-202ENST00000340019 CDKL5O76039 1030 aa9.12□□□□□ -0.95
TMC1-202ENST00000340019 EEF2P13639 858 aaKnown RBP9.12□□□□□ -0.95
TMC1-202ENST00000340019 SYT1P21579 422 aa9.12□□□□□ -0.95
TMC1-202ENST00000340019 NUCB2P80303 420 aa9.12□□□□□ -0.95
TMC1-202ENST00000340019 RAB3GAP1Q15042 981 aa9.12□□□□□ -0.95
TMC1-202ENST00000340019 PNMA8AQ86V59 439 aaPredicted RBP9.12□□□□□ -0.95
TMC1-202ENST00000340019 DDX11Q96FC9 970 aa9.12□□□□□ -0.95
TMC1-202ENST00000340019 CABP5Q9NP86 173 aa9.12□□□□□ -0.95
TMC1-202ENST00000340019 MAD2L2Q9UI95 211 aa9.12□□□□□ -0.95
TMC1-202ENST00000340019 STK36Q9NRP7 1315 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms