RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 KRBA2Q6ZNG9 492 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 KRI1Q8N9T8 703 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 GPR101Q96P66 508 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CRNKL1Q9BZJ0 848 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 ATP8A2Q9NTI2 1148 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 VPS54Q9P1Q0 977 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 BECN2A8MW95 431 aa14.94□□□□□ -0.02
CDK5RAP1-201ENST00000339269 DDAH1O94760 285 aa14.94□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PDE4CQ08493 712 aa14.94□□□□□ -0.02
CDK5RAP1-201ENST00000339269 FAM47AQ5JRC9 791 aa14.94□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PRR5LQ6MZQ0 368 aa14.94□□□□□ -0.02
CDK5RAP1-201ENST00000339269 KCNH3Q9ULD8 1083 aa14.94□□□□□ -0.02
CDK5RAP1-201ENST00000339269 MORC2Q9Y6X9 1032 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP1-201ENST00000339269 ADAMTS3O15072 1205 aa14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 VEGFAP15692 232 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 RILPL1Q5EBL4 403 aa14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 C15orf52Q6ZUT6 534 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 DRC7Q8IY82 874 aa14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 SRBD1Q8N5C6 995 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 USP17L8P0C7I0 530 aa14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 SAFBQ15424 915 aaKnown RBP eCLIP14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CRY2Q49AN0 593 aa14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 ISM2Q6H9L7 571 aa14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 TMED8Q6PL24 325 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 USP49Q70CQ1 688 aa14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CATIPQ7Z7H3 387 aa14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 LRRC8AQ8IWT6 810 aa14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 ELOA2Q8IYF1 753 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 MYRIPQ8NFW9 859 aa14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 NAT10Q9H0A0 1025 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 V9GY48 417 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP1-201ENST00000339269 MYH6P13533 1939 aa14.92□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PRR29P0C7W0 189 aa14.92□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CCZ1BP86790 482 aa14.92□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CCZ1P86791 482 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP1-201ENST00000339269 IQCA1Q86XH1 822 aa14.92□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CABP5Q9NP86 173 aa14.92□□□□□ -0.02
CDK5RAP1-201ENST00000339269 ARPP21Q9UBL0 812 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP1-201ENST00000339269 LEMD3Q9Y2U8 911 aa14.92□□□□□ -0.02
CDK5RAP1-201ENST00000339269 SRPRBQ9Y5M8 271 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP1-201ENST00000339269 ROBO3Q96MS0 1386 aa14.92□□□□□ -0.02
CDK5RAP1-201ENST00000339269 IKBKBO14920 756 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 GYS1P13807 737 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 GPSM2P81274 684 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PDE4BQ07343 736 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 DIXDC1Q155Q3 683 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 SLC35G1Q2M3R5 365 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CCDC88AQ3V6T2 1871 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CNBD1Q8NA66 436 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 ZNF579Q8NAF0 562 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 SH3RF3Q8TEJ3 882 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 OSBPL5Q9H0X9 879 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 IL17RBQ9NRM6 502 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 RBM28Q9NW13 759 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PCDHA5Q9Y5H7 936 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 XDHP47989 1333 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 A0A087X0B3 334 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 ACTN4O43707 911 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 POLD1P28340 1107 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PTGER2P43116 358 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 C12orf60Q5U649 245 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PRIMPOLQ96LW4 560 aa14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 XPO4Q9C0E2 1151 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PPP1R1BQ9UD71 204 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CALM1P0DP23 149 aa14.9□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CALM2P0DP24 149 aa14.9□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CALM3P0DP25 149 aa14.9□□□□□ -0.02
CDK5RAP1-201ENST00000339269 ATP1A3P13637 1013 aa14.9□□□□□ -0.02
CDK5RAP1-201ENST00000339269 GTF2F1P35269 517 aaKnown RBP eCLIP14.9□□□□□ -0.022e-7■□□□□ 10.9
CDK5RAP1-201ENST00000339269 SARSP49591 514 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP1-201ENST00000339269 SLC4A8Q2Y0W8 1093 aa14.9□□□□□ -0.02
CDK5RAP1-201ENST00000339269 DZIP1Q86YF9 867 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP1-201ENST00000339269 DYNLL2Q96FJ2 89 aa14.9□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CSRNP2Q9H175 543 aa14.9□□□□□ -0.02
CDK5RAP1-201ENST00000339269 DDX60LQ5H9U9 1706 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PPP4CP60510 307 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 NT5DC1Q5TFE4 455 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 GRAMD1CQ8IYS0 662 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 WDR66Q8TBY9 1149 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 RTFDC1Q9BY42 306 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 IFNKQ9P0W0 207 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 ANKIB1Q9P2G1 1089 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SERTAD1Q9UHV2 236 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 MAN1B1Q9UKM7 699 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 LTBP1Q14766 1721 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 USP27XA6NNY8 438 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 KRT2P35908 639 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 DDR1Q08345 913 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SPTY2D1Q68D10 685 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 CNNM3Q8NE01 707 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 ANKS1AQ92625 1134 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 DPF2Q92785 391 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 MED15Q96RN5 788 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 SGIP1Q9BQI5 828 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 MCM9Q9NXL9 1143 aa14.89□□□□□ -0.03
CDK5RAP1-201ENST00000339269 DYNC1I1O14576 645 aa14.88□□□□□ -0.03
CDK5RAP1-201ENST00000339269 POLR2DO15514 142 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP1-201ENST00000339269 LDHBP07195 334 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP1-201ENST00000339269 ATP2B1P20020 1258 aa14.88□□□□□ -0.03
CDK5RAP1-201ENST00000339269 DNTTIP2Q5QJE6 756 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms