RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 CCDC39Q9UFE4 941 aa14.5□□□□□ -0.09
LIMK1-201ENST00000336180 ADRA2BP18089 450 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 SYKP43405 635 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 LONRF3Q496Y0 759 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 SLC27A3Q5K4L6 730 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 KIAA0825Q8IV33 1275 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 ZC3H12CQ9C0D7 883 aaKnown RBP14.49□□□□□ -0.09
LIMK1-201ENST00000336180 KAT14Q9H8E8 782 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 ATP8A2Q9NTI2 1148 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 BRWD3Q6RI45 1802 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 ZRSR1Q15695 479 aaKnown RBP14.49□□□□□ -0.09
LIMK1-201ENST00000336180 EZH2Q15910 746 aaKnown RBP14.49□□□□□ -0.09
LIMK1-201ENST00000336180 DPP8Q6V1X1 898 aaPredicted RBP14.49□□□□□ -0.09
LIMK1-201ENST00000336180 ZNF444Q8N0Y2 327 aaPredicted RBP14.49□□□□□ -0.09
LIMK1-201ENST00000336180 TTF2Q9UNY4 1162 aaKnown RBP14.49□□□□□ -0.09
LIMK1-201ENST00000336180 ZKSCAN5Q9Y2L8 839 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 BAG3O95817 575 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 ATP2B4P23634 1241 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 RBM5P52756 815 aaKnown RBP eCLIP14.49□□□□□ -0.09
LIMK1-201ENST00000336180 PIK3AP1Q6ZUJ8 805 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 PNMA1Q8ND90 353 aa14.49□□□□□ -0.09
LIMK1-201ENST00000336180 R3HCC1Q9Y3T6 440 aaKnown RBP14.49□□□□□ -0.09
LIMK1-201ENST00000336180 GOLGA6L19H0YKK7 550 aa14.48□□□□□ -0.09
LIMK1-201ENST00000336180 YEATS4O95619 227 aa14.48□□□□□ -0.09
LIMK1-201ENST00000336180 SLC3A2P08195 630 aaKnown RBP14.48□□□□□ -0.09
LIMK1-201ENST00000336180 USP17L2Q6R6M4 530 aa14.48□□□□□ -0.09
LIMK1-201ENST00000336180 UBA5Q9GZZ9 404 aa14.48□□□□□ -0.09
LIMK1-201ENST00000336180 ARPP21Q9UBL0 812 aaPredicted RBP14.48□□□□□ -0.09
LIMK1-201ENST00000336180 PYCARDQ9ULZ3 195 aa14.48□□□□□ -0.09
LIMK1-201ENST00000336180 NOL7Q9UMY1 257 aaKnown RBP14.48□□□□□ -0.09
LIMK1-201ENST00000336180 SCAF8Q9UPN6 1271 aaKnown RBP14.48□□□□□ -0.09
LIMK1-201ENST00000336180 NLRP5P59047 1200 aa14.48□□□□□ -0.09
LIMK1-201ENST00000336180 CCDC186Q7Z3E2 898 aa14.48□□□□□ -0.09
LIMK1-201ENST00000336180 FILIP1Q7Z7B0 1213 aa14.48□□□□□ -0.09
LIMK1-201ENST00000336180 PARP3Q9Y6F1 533 aa14.48□□□□□ -0.09
LIMK1-201ENST00000336180 FRMPD2Q68DX3 1309 aaPredicted RBP14.48□□□□□ -0.09
LIMK1-201ENST00000336180 CHD4Q14839 1912 aa14.48□□□□□ -0.09
LIMK1-201ENST00000336180 CCDC196A0A1B0GTZ2 297 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 SRGNP10124 158 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 U2AF2P26368 475 aaKnown RBP eCLIP14.47□□□□□ -0.09
LIMK1-201ENST00000336180 RBM6P78332 1123 aaKnown RBP14.47□□□□□ -0.09
LIMK1-201ENST00000336180 FUT2Q10981 343 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 DNTTIP2Q5QJE6 756 aaKnown RBP14.47□□□□□ -0.09
LIMK1-201ENST00000336180 LRRC47Q8N1G4 583 aaKnown RBP14.47□□□□□ -0.09
LIMK1-201ENST00000336180 TMTC2Q8N394 836 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 EPSTI1Q96J88 318 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 DDX4Q9NQI0 724 aaKnown RBP14.47□□□□□ -0.09
LIMK1-201ENST00000336180 POLR2DO15514 142 aaKnown RBP14.47□□□□□ -0.09
LIMK1-201ENST00000336180 BBOX1O75936 387 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 SLC35G1Q2M3R5 365 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 TYW1BQ6NUM6 668 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 TMTC3Q6ZXV5 915 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 ZFPM1Q8IX07 1006 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 PLIN2Q99541 437 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 DAGLAQ9Y4D2 1042 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 A0A1B0GUL6 1792 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 MCM7P33993 719 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 AFMP43652 599 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 STX1AQ16623 288 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 KCNF1Q9H3M0 494 aa14.47□□□□□ -0.09
LIMK1-201ENST00000336180 CDK8P49336 464 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 UVSSAQ2YD98 709 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 HEATR3Q7Z4Q2 680 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 DEFB132Q7Z7B7 95 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 C2CD5Q86YS7 1000 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 MKRN1Q9UHC7 482 aaKnown RBP14.46□□□□□ -0.09
LIMK1-201ENST00000336180 LY75O60449 1722 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 FLT1P17948 1338 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 RASA1P20936 1047 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 LMOD1P29536 600 aaPredicted RBP14.46□□□□□ -0.09
LIMK1-201ENST00000336180 NFIAQ12857 509 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 CCDC144BQ3MJ40 725 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 RBM43Q6ZSC3 357 aaKnown RBP14.46□□□□□ -0.09
LIMK1-201ENST00000336180 EYA3Q99504 573 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 CSRNP2Q9H175 543 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 KIAA1468Q9P260 1216 aa14.46□□□□□ -0.09
LIMK1-201ENST00000336180 DUOX1Q9NRD9 1551 aa14.46□□□□□ -0.1
LIMK1-201ENST00000336180 CNTNAP5Q8WYK1 1306 aa14.46□□□□□ -0.1
LIMK1-201ENST00000336180 IQCB1Q15051 598 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 FOXP4Q8IVH2 680 aaPredicted RBP14.45□□□□□ -0.1
LIMK1-201ENST00000336180 CNNM3Q8NE01 707 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 TMEM47Q9BQJ4 181 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 SERTAD1Q9UHV2 236 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 KCNH3Q9ULD8 1083 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 MPHOSPH10O00566 681 aaKnown RBP14.45□□□□□ -0.1
LIMK1-201ENST00000336180 RXRBP28702 533 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 RHBDL3P58872 404 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 DHX40Q8IX18 779 aaKnown RBP14.45□□□□□ -0.1
LIMK1-201ENST00000336180 WASF1Q92558 559 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 DHX58Q96C10 678 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 ZHX1Q9UKY1 873 aaPredicted RBP14.45□□□□□ -0.1
LIMK1-201ENST00000336180 COL24A1Q17RW2 1714 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 VWA3AA6NCI4 1184 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 CMA1P23946 247 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 KRT2P35908 639 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 AKT1S1Q96B36 256 aa14.45□□□□□ -0.1
LIMK1-201ENST00000336180 POTEAQ6S8J7 498 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 AMOTL1Q8IY63 956 aa14.44□□□□□ -0.1
LIMK1-201ENST00000336180 TRMT44Q8IYL2 757 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms