RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 INF2Q27J81 1249 aa10.77□□□□□ -0.69
SS18L1-201ENST00000331758 TSGA10IPQ3SY00 556 aa10.77□□□□□ -0.69
SS18L1-201ENST00000331758 BLIDQ8IZY5 108 aa10.77□□□□□ -0.69
SS18L1-201ENST00000331758 REXO1Q8N1G1 1221 aaKnown RBP10.77□□□□□ -0.69
SS18L1-201ENST00000331758 BIN2Q9UBW5 565 aaPredicted RBP10.77□□□□□ -0.69
SS18L1-201ENST00000331758 USH1GQ495M9 461 aa10.77□□□□□ -0.69
SS18L1-201ENST00000331758 TRMT44Q8IYL2 757 aaKnown RBP10.77□□□□□ -0.69
SS18L1-201ENST00000331758 RNF26Q9BY78 433 aaPredicted RBP10.77□□□□□ -0.69
SS18L1-201ENST00000331758 USP17L3A6NCW0 530 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 USP17L4A6NCW7 530 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 TBCAO75347 108 aaKnown RBP10.76□□□□□ -0.69
SS18L1-201ENST00000331758 FMNL1O95466 1100 aaPredicted RBP10.76□□□□□ -0.69
SS18L1-201ENST00000331758 ZNF75DP51815 510 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 GNG11P61952 73 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 SLC39A14Q15043 492 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 ZNF827Q17R98 1081 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 USP17L1Q7RTZ2 530 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 LINC00301Q8NCQ3 95 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 RASGRP4Q8TDF6 673 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 TSC1Q92574 1164 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 LRRC27Q9C0I9 530 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 NFE2L3Q9Y4A8 694 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 DDAH1O94760 285 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 NLRP12P59046 1061 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 SUPT20HQ8NEM7 779 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 FERMT2Q96AC1 680 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 CTAGE1Q96RT6 745 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 LZTS2Q9BRK4 669 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 BLZF1Q9H2G9 400 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 CCT6AP40227 531 aaKnown RBP10.76□□□□□ -0.69
SS18L1-201ENST00000331758 MATR3P43243 847 aaKnown RBP eCLIP10.76□□□□□ -0.698e-7■■■■□ 22.2
SS18L1-201ENST00000331758 SF3B3Q15393 1217 aaKnown RBP10.76□□□□□ -0.69
SS18L1-201ENST00000331758 CCDC181Q5TID7 509 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 CEP135Q66GS9 1140 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 KRT25Q7Z3Z0 450 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 FAM114A1Q8IWE2 563 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.76□□□□□ -0.69
SS18L1-201ENST00000331758 CD209Q9NNX6 404 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 ADCY7P51828 1080 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 CASP7P55210 303 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 CHMP4BP1P59074 171 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 FANCCQ00597 558 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 WWC2Q6AWC2 1192 aa10.76□□□□□ -0.69
SS18L1-201ENST00000331758 TCP10L2B9ZVM9 353 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 PLCD1P51178 756 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 DNA2P51530 1060 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 PTGDRQ13258 359 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 NIM1KQ8IY84 436 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 SLC44A5Q8NCS7 719 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 SH3RF3Q8TEJ3 882 aaPredicted RBP10.75□□□□□ -0.69
SS18L1-201ENST00000331758 PKD2L1Q9P0L9 805 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 NRXN3Q9Y4C0 1643 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 ADRA2BP18089 450 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 ARHGEF10LQ9HCE6 1279 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 POLR3EQ9NVU0 708 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 HSP90B2PQ58FF3 399 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 ODF2Q5BJF6 829 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 SYCP3Q8IZU3 236 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 CPXCR1Q8N123 301 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 STAG1Q8WVM7 1258 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 BRIP1Q9BX63 1249 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 VPS16Q9H269 839 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 DCP1AQ9NPI6 582 aaPredicted RBP10.75□□□□□ -0.69
SS18L1-201ENST00000331758 LRWD1Q9UFC0 647 aa10.75□□□□□ -0.69
SS18L1-201ENST00000331758 ANKRD26Q9UPS8 1709 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 NMT2O60551 498 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 PLEKHA8P1O95397 391 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 CDC27P30260 824 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 CASQ1P31415 396 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 PDE4DQ08499 809 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 CERKLQ49MI3 558 aaPredicted RBP10.74□□□□□ -0.69
SS18L1-201ENST00000331758 DNAI1Q9UI46 699 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 SERPINB13Q9UIV8 391 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 CTNND2Q9UQB3 1225 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 BCS1LQ9Y276 419 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 CLRN2A0PK11 232 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 EXOSC10Q01780 885 aaKnown RBP10.74□□□□□ -0.69
SS18L1-201ENST00000331758 PLS1Q14651 629 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 USP17L2Q6R6M4 530 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 TMC4Q7Z404 712 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 MLKLQ8NB16 471 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 ZSWIM4Q9H7M6 989 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 MMRN2Q9H8L6 949 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 MMP1P03956 469 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 TEX35Q5T0J7 233 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 RC3H1Q5TC82 1133 aaKnown RBP10.74□□□□□ -0.69
SS18L1-201ENST00000331758 SV2BQ7L1I2 683 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 SLC4A9Q96Q91 983 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 MRVI1Q9Y6F6 885 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 MON2Q7Z3U7 1717 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 A0A1W2PQ27 194 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 A0A1W2PQ64 194 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 A0A1W2PQD8 194 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 NPR1P16066 1061 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 CACNB3P54284 484 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 UBXN1Q04323 297 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 SNX29Q8TEQ0 813 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 PCDHA5Q9Y5H7 936 aa10.74□□□□□ -0.69
SS18L1-201ENST00000331758 ABCC12Q96J65 1359 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms