RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ARMT1Q9H993 441 aa14.98□□□□□ -0.01
TPM3-204ENST00000323144 GINM1Q9NU53 330 aa14.98□□□□□ -0.01
TPM3-204ENST00000323144 PAG1Q9NWQ8 432 aa14.98□□□□□ -0.01
TPM3-204ENST00000323144 C19orf81C9J6K1 198 aa14.97□□□□□ -0.01
TPM3-204ENST00000323144 CNMDO75829 334 aa14.97□□□□□ -0.01
TPM3-204ENST00000323144 HMGCRP04035 888 aa14.97□□□□□ -0.01
TPM3-204ENST00000323144 ERVK-9P63128 1117 aa14.97□□□□□ -0.01
TPM3-204ENST00000323144 ERVK-24P63145 666 aa14.97□□□□□ -0.01
TPM3-204ENST00000323144 ABCB5Q2M3G0 1257 aa14.97□□□□□ -0.01
TPM3-204ENST00000323144 USP17L2Q6R6M4 530 aa14.97□□□□□ -0.01
TPM3-204ENST00000323144 NKX2-3Q8TAU0 364 aa14.97□□□□□ -0.01
TPM3-204ENST00000323144 MCM9Q9NXL9 1143 aa14.97□□□□□ -0.01
TPM3-204ENST00000323144 GJD2Q9UKL4 321 aa14.97□□□□□ -0.01
TPM3-204ENST00000323144 COLQQ9Y215 455 aaPredicted RBP14.97□□□□□ -0.01
TPM3-204ENST00000323144 MYH4Q9Y623 1939 aa14.97□□□□□ -0.01
TPM3-204ENST00000323144 PRKAB2O43741 272 aa14.96□□□□□ -0.01
TPM3-204ENST00000323144 RAB11FIP3O75154 756 aa14.96□□□□□ -0.01
TPM3-204ENST00000323144 SGPL1O95470 568 aa14.96□□□□□ -0.01
TPM3-204ENST00000323144 ADD2P35612 726 aa14.96□□□□□ -0.01
TPM3-204ENST00000323144 SEPT2Q15019 361 aa14.96□□□□□ -0.01
TPM3-204ENST00000323144 CERKLQ49MI3 558 aaPredicted RBP14.96□□□□□ -0.01
TPM3-204ENST00000323144 TTC6Q86TZ1 520 aa14.96□□□□□ -0.01
TPM3-204ENST00000323144 DCP1AQ9NPI6 582 aaPredicted RBP14.96□□□□□ -0.01
TPM3-204ENST00000323144 RBPJLQ9UBG7 517 aa14.96□□□□□ -0.01
TPM3-204ENST00000323144 PLXNA1Q9UIW2 1896 aa14.95□□□□□ -0.02
TPM3-204ENST00000323144 CYP2D7A0A087X1C5 515 aa14.95□□□□□ -0.02
TPM3-204ENST00000323144 POLR3DP05423 398 aaPredicted RBP14.95□□□□□ -0.02
TPM3-204ENST00000323144 CYP2B6P20813 491 aa14.95□□□□□ -0.02
TPM3-204ENST00000323144 TSHZ3Q63HK5 1081 aa14.95□□□□□ -0.02
TPM3-204ENST00000323144 TMED8Q6PL24 325 aaPredicted RBP14.95□□□□□ -0.02
TPM3-204ENST00000323144 CHRDL2Q6WN34 429 aa14.95□□□□□ -0.02
TPM3-204ENST00000323144 DYNLL2Q96FJ2 89 aa14.95□□□□□ -0.02
TPM3-204ENST00000323144 HAUS7Q99871 368 aa14.95□□□□□ -0.02
TPM3-204ENST00000323144 KIAA1683Q9H0B3 1180 aa14.95□□□□□ -0.02
TPM3-204ENST00000323144 CRISPLD2Q9H0B8 497 aa14.95□□□□□ -0.02
TPM3-204ENST00000323144 A0A1W2PRG0 241 aa14.94□□□□□ -0.02
TPM3-204ENST00000323144 ATP5JP18859 108 aa14.94□□□□□ -0.02
TPM3-204ENST00000323144 FXR1P51114 621 aaKnown RBP eCLIP14.94□□□□□ -0.02
TPM3-204ENST00000323144 CCL14Q16627 93 aa14.94□□□□□ -0.02
TPM3-204ENST00000323144 Q3C1V9 767 aa14.94□□□□□ -0.02
TPM3-204ENST00000323144 GPR142Q7Z601 462 aa14.94□□□□□ -0.02
TPM3-204ENST00000323144 GPRC5AQ8NFJ5 357 aa14.94□□□□□ -0.02
TPM3-204ENST00000323144 SOCS4Q8WXH5 440 aa14.94□□□□□ -0.02
TPM3-204ENST00000323144 RPAP3Q9H6T3 665 aaPredicted RBP14.94□□□□□ -0.02
TPM3-204ENST00000323144 TRIOBPQ9H2D6 2365 aa14.93□□□□□ -0.02
TPM3-204ENST00000323144 RANBP2P49792 3224 aaKnown RBP14.93□□□□□ -0.02
TPM3-204ENST00000323144 SPDYE16A6NNV3 312 aaPredicted RBP14.93□□□□□ -0.02
TPM3-204ENST00000323144 MPHOSPH10O00566 681 aaKnown RBP14.93□□□□□ -0.02
TPM3-204ENST00000323144 PRKAR2AP13861 404 aaKnown RBP14.93□□□□□ -0.02
TPM3-204ENST00000323144 KIAA1755Q5JYT7 1200 aa14.93□□□□□ -0.02
TPM3-204ENST00000323144 DPF3Q92784 378 aa14.93□□□□□ -0.02
TPM3-204ENST00000323144 APBA2Q99767 749 aa14.93□□□□□ -0.02
TPM3-204ENST00000323144 LRRCC1Q9C099 1032 aa14.93□□□□□ -0.02
TPM3-204ENST00000323144 PCDH10Q9P2E7 1040 aa14.93□□□□□ -0.02
TPM3-204ENST00000323144 LTBP2Q14767 1821 aa14.93□□□□□ -0.02
TPM3-204ENST00000323144 USP17L15C9J2P7 530 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 USP17L13C9JLJ4 530 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 USP17L11C9JVI0 530 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 USP17L18D6R9N7 530 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 USP17L22D6RA61 530 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 USP17L17D6RBQ6 530 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 USP17L19D6RCP7 530 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 USP17L20D6RJB6 530 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 AKR1B1P15121 316 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 ZKSCAN1P17029 563 aaPredicted RBP14.92□□□□□ -0.02
TPM3-204ENST00000323144 MAPK4P31152 587 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 USP17L24Q0WX57 530 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 PDE3AQ14432 1141 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 MORN1Q5T089 497 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 MAP3K21Q5TCX8 1036 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 GTF3C2Q8WUA4 911 aaPredicted RBP14.92□□□□□ -0.02
TPM3-204ENST00000323144 USP6NLQ92738 828 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 NUDT12Q9BQG2 462 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 HTATIP2Q9BUP3 242 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 BTBD7Q9P203 1132 aa14.92□□□□□ -0.02
TPM3-204ENST00000323144 TFRCP02786 760 aaKnown RBP14.91□□□□□ -0.02
TPM3-204ENST00000323144 MNX1P50219 401 aaPredicted RBP14.91□□□□□ -0.02
TPM3-204ENST00000323144 USP14P54578 494 aa14.91□□□□□ -0.02
TPM3-204ENST00000323144 CATSPERGQ6ZRH7 1159 aa14.91□□□□□ -0.02
TPM3-204ENST00000323144 PLEKHH3Q7Z736 793 aa14.91□□□□□ -0.02
TPM3-204ENST00000323144 PAWRQ96IZ0 340 aaKnown RBP14.91□□□□□ -0.02
TPM3-204ENST00000323144 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.91□□□□□ -0.02
TPM3-204ENST00000323144 CABP5Q9NP86 173 aa14.91□□□□□ -0.02
TPM3-204ENST00000323144 RPTORQ8N122 1335 aa14.91□□□□□ -0.02
TPM3-204ENST00000323144 LRRC37A2A6NM11 1700 aa14.9□□□□□ -0.02
TPM3-204ENST00000323144 CCND3P30281 292 aaPredicted RBP14.9□□□□□ -0.02
TPM3-204ENST00000323144 ICA1Q05084 483 aa14.9□□□□□ -0.02
TPM3-204ENST00000323144 WDR78Q5VTH9 848 aa14.9□□□□□ -0.02
TPM3-204ENST00000323144 TANGO6Q9C0B7 1094 aa14.9□□□□□ -0.02
TPM3-204ENST00000323144 PUS7LQ9H0K6 701 aaKnown RBP14.9□□□□□ -0.02
TPM3-204ENST00000323144 HMX1Q9NP08 348 aaPredicted RBP14.9□□□□□ -0.02
TPM3-204ENST00000323144 FLRT1Q9NZU1 646 aa14.9□□□□□ -0.02
TPM3-204ENST00000323144 RBM27Q9P2N5 1060 aaKnown RBP14.9□□□□□ -0.02
TPM3-204ENST00000323144 RABGAP1Q9Y3P9 1069 aa14.9□□□□□ -0.02
TPM3-204ENST00000323144 ROBO3Q96MS0 1386 aa14.89□□□□□ -0.03
TPM3-204ENST00000323144 RGS2P41220 211 aa14.89□□□□□ -0.03
TPM3-204ENST00000323144 CACNB2Q08289 660 aaPredicted RBP14.89□□□□□ -0.03
TPM3-204ENST00000323144 LBX2Q6XYB7 198 aa14.89□□□□□ -0.03
TPM3-204ENST00000323144 TMEM179Q6ZVK1 233 aa14.89□□□□□ -0.03
TPM3-204ENST00000323144 PRO3102Q9H379 93 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms