RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ZSWIM8A7E2V4 1837 aa21.36■■□□□ 1.01
TPM1-203ENST00000317516 SIPA1L1O43166 1804 aa21.36■■□□□ 1.01
TPM1-203ENST00000317516 FOCADQ5VW36 1801 aa21.36■■□□□ 1.01
TPM1-203ENST00000317516 USP17L12C9JPN9 530 aa21.35■■□□□ 1.01
TPM1-203ENST00000317516 USP17L21D6R901 530 aa21.35■■□□□ 1.01
TPM1-203ENST00000317516 CYP2D6P10635 497 aa21.35■■□□□ 1.01
TPM1-203ENST00000317516 CATSPERGQ6ZRH7 1159 aa21.35■■□□□ 1.01
TPM1-203ENST00000317516 KBTBD3Q8NAB2 608 aa21.35■■□□□ 1.01
TPM1-203ENST00000317516 GCC1Q96CN9 775 aa21.35■■□□□ 1.01
TPM1-203ENST00000317516 UNC93B1Q9H1C4 597 aa21.35■■□□□ 1.01
TPM1-203ENST00000317516 ZBTB47Q9UFB7 747 aaPredicted RBP21.35■■□□□ 1.01
TPM1-203ENST00000317516 GJD2Q9UKL4 321 aa21.35■■□□□ 1.01
TPM1-203ENST00000317516 RABGAP1Q9Y3P9 1069 aa21.35■■□□□ 1.01
TPM1-203ENST00000317516 PCDHB15Q9Y5E8 787 aa21.35■■□□□ 1.01
TPM1-203ENST00000317516 ERC2O15083 957 aa21.34■■□□□ 1.01
TPM1-203ENST00000317516 ZFYP08048 801 aaPredicted RBP21.34■■□□□ 1.01
TPM1-203ENST00000317516 GUCY1A2P33402 732 aa21.34■■□□□ 1.01
TPM1-203ENST00000317516 ERVK-9P63128 1117 aa21.34■■□□□ 1.01
TPM1-203ENST00000317516 ERVK-24P63145 666 aa21.34■■□□□ 1.01
TPM1-203ENST00000317516 CCNA1P78396 465 aa21.34■■□□□ 1.01
TPM1-203ENST00000317516 C12orf60Q5U649 245 aa21.34■■□□□ 1.01
TPM1-203ENST00000317516 SOCS4Q8WXH5 440 aa21.34■■□□□ 1.01
TPM1-203ENST00000317516 NUDT12Q9BQG2 462 aa21.34■■□□□ 1.01
TPM1-203ENST00000317516 PAGR1Q9BTK6 254 aa21.34■■□□□ 1.01
TPM1-203ENST00000317516 PUS7LQ9H0K6 701 aaKnown RBP21.34■■□□□ 1.01
TPM1-203ENST00000317516 TXNRD2Q9NNW7 524 aa21.34■■□□□ 1.01
TPM1-203ENST00000317516 CENPFP49454 3210 aa21.34■■□□□ 1.01
TPM1-203ENST00000317516 LOC285556D6RIA3 1793 aa21.33■■□□□ 1.01
TPM1-203ENST00000317516 SGPL1O95470 568 aa21.33■■□□□ 1.01
TPM1-203ENST00000317516 VCAM1P19320 739 aa21.33■■□□□ 1.01
TPM1-203ENST00000317516 U2AF1L4Q8WU68 220 aaKnown RBP21.33■■□□□ 1.01
TPM1-203ENST00000317516 DYNLL2Q96FJ2 89 aa21.33■■□□□ 1.01
TPM1-203ENST00000317516 CWC22Q9HCG8 908 aaKnown RBP21.33■■□□□ 1.01
TPM1-203ENST00000317516 ATAD5Q96QE3 1844 aa21.33■■□□□ 1.01
TPM1-203ENST00000317516 CDK5RAP2Q96SN8 1893 aa21.32■■□□□ 1
TPM1-203ENST00000317516 TTC41PQ6P2S7 1318 aa21.32■■□□□ 1
TPM1-203ENST00000317516 MYH1P12882 1939 aa21.32■■□□□ 1
TPM1-203ENST00000317516 GLRX3O76003 335 aaKnown RBP21.32■■□□□ 1
TPM1-203ENST00000317516 HMGCRP04035 888 aa21.32■■□□□ 1
TPM1-203ENST00000317516 Q3C1V9 767 aa21.32■■□□□ 1
TPM1-203ENST00000317516 SLC44A5Q8NCS7 719 aa21.32■■□□□ 1
TPM1-203ENST00000317516 STRBPQ96SI9 672 aaKnown RBP21.32■■□□□ 1
TPM1-203ENST00000317516 RPAP3Q9H6T3 665 aaPredicted RBP21.32■■□□□ 1
TPM1-203ENST00000317516 SH2D4AQ9H788 454 aa21.32■■□□□ 1
TPM1-203ENST00000317516 ARHGEF10LQ9HCE6 1279 aa21.32■■□□□ 1
TPM1-203ENST00000317516 RBBP6Q7Z6E9 1792 aaKnown RBP21.31■■□□□ 1
TPM1-203ENST00000317516 RNF113AO15541 343 aaKnown RBP21.31■■□□□ 1
TPM1-203ENST00000317516 TFRCP02786 760 aaKnown RBP21.31■■□□□ 1
TPM1-203ENST00000317516 CHGBP05060 677 aa21.31■■□□□ 1
TPM1-203ENST00000317516 XRCC5P13010 732 aaKnown RBP21.31■■□□□ 1
TPM1-203ENST00000317516 CDK8P49336 464 aa21.31■■□□□ 1
TPM1-203ENST00000317516 EVX2Q03828 476 aa21.31■■□□□ 1
TPM1-203ENST00000317516 GIMAP6Q6P9H5 292 aa21.31■■□□□ 1
TPM1-203ENST00000317516 CTR9Q6PD62 1173 aa21.31■■□□□ 1
TPM1-203ENST00000317516 TRMT44Q8IYL2 757 aaKnown RBP21.31■■□□□ 1
TPM1-203ENST00000317516 APPBP2Q92624 585 aa21.31■■□□□ 1
TPM1-203ENST00000317516 SHISA4Q96DD7 197 aa21.31■■□□□ 1
TPM1-203ENST00000317516 HOXC10Q9NYD6 342 aa21.31■■□□□ 1
TPM1-203ENST00000317516 ARPP21Q9UBL0 812 aaPredicted RBP21.31■■□□□ 1
TPM1-203ENST00000317516 CYP2B6P20813 491 aa21.3■■□□□ 1
TPM1-203ENST00000317516 COG2Q14746 738 aa21.3■■□□□ 1
TPM1-203ENST00000317516 TSHZ3Q63HK5 1081 aa21.3■■□□□ 1
TPM1-203ENST00000317516 LBX2Q6XYB7 198 aa21.3■■□□□ 1
TPM1-203ENST00000317516 C16orf86Q6ZW13 317 aa21.3■■□□□ 1
TPM1-203ENST00000317516 PLEKHH3Q7Z736 793 aa21.3■■□□□ 1
TPM1-203ENST00000317516 DEFB118Q96PH6 123 aa21.3■■□□□ 1
TPM1-203ENST00000317516 HTATIP2Q9BUP3 242 aa21.3■■□□□ 1
TPM1-203ENST00000317516 A0A1W2PRG0 241 aa21.29■■□□□ 1
TPM1-203ENST00000317516 PEX10O60683 326 aa21.29■■□□□ 1
TPM1-203ENST00000317516 AKR1B1P15121 316 aa21.29■■□□□ 1
TPM1-203ENST00000317516 GNAT2P19087 354 aa21.29■■□□□ 1
TPM1-203ENST00000317516 ICA1Q05084 483 aa21.29■■□□□ 1
TPM1-203ENST00000317516 GPR142Q7Z601 462 aa21.29■■□□□ 1
TPM1-203ENST00000317516 LPAR1Q92633 364 aa21.29■■□□□ 1
TPM1-203ENST00000317516 YTHDC1Q96MU7 727 aaKnown RBP21.29■■□□□ 1
TPM1-203ENST00000317516 HMX1Q9NP08 348 aaPredicted RBP21.29■■□□□ 1
TPM1-203ENST00000317516 PAK6Q9NQU5 681 aaPredicted RBP21.29■■□□□ 1
TPM1-203ENST00000317516 RPTORQ8N122 1335 aa21.29■■□□□ 1
TPM1-203ENST00000317516 CYP2D7A0A087X1C5 515 aa21.28■■□□□ 1
TPM1-203ENST00000317516 RGS2P41220 211 aa21.28■■□□□ 1
TPM1-203ENST00000317516 SBK1Q52WX2 424 aa21.28■■□□□ 1
TPM1-203ENST00000317516 DPF3Q92784 378 aa21.28■■□□□ 1
TPM1-203ENST00000317516 OSBP2Q969R2 916 aa21.28■■□□□ 1
TPM1-203ENST00000317516 CRBNQ96SW2 442 aa21.28■■□□□ 1
TPM1-203ENST00000317516 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.28■■□□□ 1
TPM1-203ENST00000317516 PORCNQ9H237 461 aa21.28■■□□□ 1
TPM1-203ENST00000317516 KANSL2Q9H9L4 492 aa21.28■■□□□ 1
TPM1-203ENST00000317516 TMX2Q9Y320 296 aa21.28■■□□□ 1
TPM1-203ENST00000317516 FARP2O94887 1054 aaPredicted RBP21.27■■□□□ 1
TPM1-203ENST00000317516 AAMPQ13685 434 aa21.27■■□□□ 1
TPM1-203ENST00000317516 TANGO6Q9C0B7 1094 aa21.27■■□□□ 1
TPM1-203ENST00000317516 MGAMO43451 1857 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 SPDYE16A6NNV3 312 aaPredicted RBP21.26■□□□□ 0.99
TPM1-203ENST00000317516 GSG1L2A8MUP6 293 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 CNMDO75829 334 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 SLC34A2O95436 690 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 APPP05067 770 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 MX1P20591 662 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 MORN1Q5T089 497 aa21.26■□□□□ 0.99
TPM1-203ENST00000317516 ANKRD45Q5TZF3 282 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms