RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 LRRN2O75325 713 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 NR5A1Q13285 461 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 SEPT7Q16181 437 aaKnown RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 ARMT1Q9H993 441 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 XRN1Q8IZH2 1706 aaKnown RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 RANBP6O60518 1105 aaKnown RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 MBD3O95983 291 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 BMP6P22004 513 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 SLMAPQ14BN4 828 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 EML3Q32P44 896 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 CCDC92Q53HC0 331 aaPredicted RBP4.1□□□□□ -1.75
GEN1-201ENST00000317402 HSP90AB4PQ58FF6 505 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 HDAC6Q9UBN7 1215 aa4.1□□□□□ -1.75
GEN1-201ENST00000317402 B4E1Z4 1266 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 NUCB2P80303 420 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 C8orf37Q96NL8 207 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 INTS13Q9NVM9 706 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 NAV1Q8NEY1 1877 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 SGSM2O43147 1006 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 ODF2Q5BJF6 829 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 BICD2Q8TD16 824 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 ARHGAP45Q92619 1136 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 GOLPH3Q9H4A6 298 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 NOL7Q9UMY1 257 aaKnown RBP4.09□□□□□ -1.75
GEN1-201ENST00000317402 NUP98P52948 1817 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 ZNF185O15231 689 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 PDE6AP16499 860 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 ZKSCAN1P17029 563 aaPredicted RBP4.09□□□□□ -1.75
GEN1-201ENST00000317402 CCDC30Q5VVM6 783 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 FBXO38Q6PIJ6 1188 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 ZCRB1Q8TBF4 217 aaKnown RBP4.09□□□□□ -1.75
GEN1-201ENST00000317402 TMEM51Q9NW97 253 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 SMC3Q9UQE7 1217 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 IDH1O75874 414 aaKnown RBP4.09□□□□□ -1.75
GEN1-201ENST00000317402 SYCP1Q15431 976 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 TPD52L2O43399 206 aaKnown RBP4.09□□□□□ -1.75
GEN1-201ENST00000317402 SLC3A2P08195 630 aaKnown RBP4.09□□□□□ -1.75
GEN1-201ENST00000317402 GOLGA8HP0CJ92 632 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 EPS15P42566 896 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 BCAMP50895 628 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 PDLIM2Q96JY6 352 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 ZBTB1Q9Y2K1 713 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 CASZ1Q86V15 1759 aa4.09□□□□□ -1.75
GEN1-201ENST00000317402 CCDC175P0C221 793 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 HSPA4P34932 840 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 IL6STP40189 918 aaPredicted RBP4.09□□□□□ -1.76
GEN1-201ENST00000317402 ALDH1L2Q3SY69 923 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 SYNE3Q6ZMZ3 975 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 SCLT1Q96NL6 688 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 HSD3B7Q9H2F3 369 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 RIMBP3CA6NJZ7 1639 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 RIMBP3BA6NNM3 1639 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 RIMBP3Q9UFD9 1639 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 CPSF1Q10570 1443 aaKnown RBP4.09□□□□□ -1.76
GEN1-201ENST00000317402 ADAMTS13Q76LX8 1427 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 TRIM49BA6NDI0 452 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 SMC2O95347 1197 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 MFSD4BQ5TF39 518 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 ZSCAN25Q6NSZ9 544 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 CCDC84Q86UT8 332 aaPredicted RBP4.09□□□□□ -1.76
GEN1-201ENST00000317402 DDX12PQ92771 950 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 TRIM5Q9C035 493 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 SAMSN1Q9NSI8 373 aaKnown RBP4.09□□□□□ -1.76
GEN1-201ENST00000317402 NCAPD2Q15021 1401 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 EML5Q05BV3 1969 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 GIGYF1O75420 1035 aaPredicted RBP4.09□□□□□ -1.76
GEN1-201ENST00000317402 GYG1P46976 350 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 RBM6P78332 1123 aaKnown RBP4.09□□□□□ -1.76
GEN1-201ENST00000317402 NECTIN1Q15223 517 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 CCDC181Q5TID7 509 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 ARMC9Q7Z3E5 817 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 ADAM33Q9BZ11 813 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 FAM184BQ9ULE4 1060 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 DUSP10Q9Y6W6 482 aa4.09□□□□□ -1.76
GEN1-201ENST00000317402 KIAA0232Q92628 1395 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 ATF3P18847 181 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 AFMP43652 599 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 TYRO3Q06418 890 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 JMYQ8N9B5 988 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 WHAMMQ8TF30 809 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 RAPGEF4Q8WZA2 1011 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 UBXN4Q92575 508 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 SMARCE1Q969G3 411 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 CCDC43Q96MW1 224 aaKnown RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 VAT1LQ9HCJ6 419 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 IFNKQ9P0W0 207 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 TXLNAP40222 546 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 SPATA31A3Q5VYP0 1347 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 USF3Q68DE3 2245 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 CTNNBL1Q8WYA6 563 aaPredicted RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 SBF1O95248 1867 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 RGPD8O14715 1765 aaPredicted RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 TMEM2Q9UHN6 1383 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 AOX1Q06278 1338 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 PEX19P40855 299 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 PSMD2Q13200 908 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 TRIM29Q14134 588 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 SAFBQ15424 915 aaKnown RBP eCLIP4.08□□□□□ -1.76
GEN1-201ENST00000317402 RBM26Q5T8P6 1007 aaKnown RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 KLHL10Q6JEL2 608 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms