RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 DLEC1Q9Y238 1755 aa22.36■■□□□ 1.17
AP3S1-201ENST00000316788 CATIPQ7Z7H3 387 aa22.36■■□□□ 1.17
AP3S1-201ENST00000316788 ZNF592Q92610 1267 aa22.36■■□□□ 1.17
AP3S1-201ENST00000316788 SMARCE1Q969G3 411 aa22.36■■□□□ 1.17
AP3S1-201ENST00000316788 PCDHB6Q9Y5E3 794 aa22.36■■□□□ 1.17
AP3S1-201ENST00000316788 ACTN4O43707 911 aaKnown RBP22.35■■□□□ 1.17
AP3S1-201ENST00000316788 RPS6KA4O75676 772 aa22.35■■□□□ 1.17
AP3S1-201ENST00000316788 ZNF18P17022 549 aa22.35■■□□□ 1.17
AP3S1-201ENST00000316788 BMP6P22004 513 aa22.35■■□□□ 1.17
AP3S1-201ENST00000316788 ENAHQ8N8S7 591 aaPredicted RBP22.35■■□□□ 1.17
AP3S1-201ENST00000316788 NUP133Q8WUM0 1156 aa22.35■■□□□ 1.17
AP3S1-201ENST00000316788 COL4A1P02462 1669 aa22.35■■□□□ 1.17
AP3S1-201ENST00000316788 TRIM75PA6NK02 468 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 MINDY4BA8MYZ0 360 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 ORC4O43929 436 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 SLU7O95391 586 aaKnown RBP22.34■■□□□ 1.17
AP3S1-201ENST00000316788 ERCC5P28715 1186 aaPredicted RBP22.34■■□□□ 1.17
AP3S1-201ENST00000316788 KRT2P35908 639 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 NR5A1Q13285 461 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 PKN1Q16512 942 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 CFAP100Q494V2 611 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 ISM2Q6H9L7 571 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 FBXO33Q7Z6M2 555 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 IQCA1Q86XH1 822 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 SDR42E1Q8WUS8 393 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 FERMT2Q96AC1 680 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 FANCLQ9NW38 375 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 TFCP2L1Q9NZI6 479 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 SERTAD1Q9UHV2 236 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 POLR2DO15514 142 aaKnown RBP22.34■■□□□ 1.17
AP3S1-201ENST00000316788 TOP1P11387 765 aaKnown RBP22.34■■□□□ 1.17
AP3S1-201ENST00000316788 TBX2Q13207 712 aaPredicted RBP22.34■■□□□ 1.17
AP3S1-201ENST00000316788 SLC15A2Q16348 729 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 DPF2Q92785 391 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 ABCF2Q9UG63 623 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 MINPP1Q9UNW1 487 aa22.34■■□□□ 1.17
AP3S1-201ENST00000316788 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.34■■□□□ 1.17
AP3S1-201ENST00000316788 RTCBQ9Y3I0 505 aaKnown RBP22.34■■□□□ 1.17
AP3S1-201ENST00000316788 PHLPP2Q6ZVD8 1323 aa22.33■■□□□ 1.17
AP3S1-201ENST00000316788 UBR3Q6ZT12 1888 aa22.33■■□□□ 1.17
AP3S1-201ENST00000316788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.33■■□□□ 1.17
AP3S1-201ENST00000316788 GYG1P46976 350 aa22.33■■□□□ 1.17
AP3S1-201ENST00000316788 PDE4BQ07343 736 aa22.33■■□□□ 1.17
AP3S1-201ENST00000316788 ERFEQ4G0M1 354 aa22.33■■□□□ 1.17
AP3S1-201ENST00000316788 IFIT1BQ5T764 474 aaKnown RBP22.33■■□□□ 1.17
AP3S1-201ENST00000316788 FAM84BQ96KN1 310 aaPredicted RBP22.33■■□□□ 1.17
AP3S1-201ENST00000316788 BRMS1Q9HCU9 246 aa22.33■■□□□ 1.17
AP3S1-201ENST00000316788 GRIN1Q05586 938 aa22.32■■□□□ 1.16
AP3S1-201ENST00000316788 TROAPQ12815 778 aa22.32■■□□□ 1.16
AP3S1-201ENST00000316788 OXER1Q8TDS5 423 aa22.32■■□□□ 1.16
AP3S1-201ENST00000316788 ARHGEF1Q92888 912 aaKnown RBP22.32■■□□□ 1.16
AP3S1-201ENST00000316788 PDGFDQ9GZP0 370 aaPredicted RBP22.32■■□□□ 1.16
AP3S1-201ENST00000316788 CABP5Q9NP86 173 aa22.32■■□□□ 1.16
AP3S1-201ENST00000316788 ZNF215Q9UL58 517 aaPredicted RBP22.32■■□□□ 1.16
AP3S1-201ENST00000316788 PLCD1P51178 756 aa22.31■■□□□ 1.16
AP3S1-201ENST00000316788 TMTC3Q6ZXV5 915 aa22.31■■□□□ 1.16
AP3S1-201ENST00000316788 ZNF397Q8NF99 534 aaPredicted RBP22.31■■□□□ 1.16
AP3S1-201ENST00000316788 STK32BQ9NY57 414 aa22.31■■□□□ 1.16
AP3S1-201ENST00000316788 FOXN1O15353 648 aa22.31■■□□□ 1.16
AP3S1-201ENST00000316788 ARHGAP6O43182 974 aa22.31■■□□□ 1.16
AP3S1-201ENST00000316788 ETF1P62495 437 aaKnown RBP22.31■■□□□ 1.16
AP3S1-201ENST00000316788 CCDC93Q567U6 631 aa22.31■■□□□ 1.16
AP3S1-201ENST00000316788 SH3RF1Q7Z6J0 888 aa22.31■■□□□ 1.16
AP3S1-201ENST00000316788 TNFRSF25Q93038 417 aa22.31■■□□□ 1.16
AP3S1-201ENST00000316788 CSRNP2Q9H175 543 aa22.31■■□□□ 1.16
AP3S1-201ENST00000316788 INTS13Q9NVM9 706 aa22.31■■□□□ 1.16
AP3S1-201ENST00000316788 OGFRQ9NZT2 677 aa22.31■■□□□ 1.16
AP3S1-201ENST00000316788 SRP68Q9UHB9 627 aaKnown RBP22.31■■□□□ 1.16
AP3S1-201ENST00000316788 MAST2Q6P0Q8 1798 aa22.3■■□□□ 1.16
AP3S1-201ENST00000316788 GOLGA6L9A6NEM1 432 aa22.3■■□□□ 1.16
AP3S1-201ENST00000316788 PRR29P0C7W0 189 aa22.3■■□□□ 1.16
AP3S1-201ENST00000316788 SBK1Q52WX2 424 aa22.3■■□□□ 1.16
AP3S1-201ENST00000316788 CTR9Q6PD62 1173 aa22.3■■□□□ 1.16
AP3S1-201ENST00000316788 COL23A1Q86Y22 540 aaPredicted RBP22.3■■□□□ 1.16
AP3S1-201ENST00000316788 SHISA4Q96DD7 197 aa22.3■■□□□ 1.16
AP3S1-201ENST00000316788 PYM1Q9BRP8 204 aaKnown RBP22.3■■□□□ 1.16
AP3S1-201ENST00000316788 NYXQ9GZU5 481 aa22.3■■□□□ 1.16
AP3S1-201ENST00000316788 ANKRD2Q9GZV1 360 aa22.3■■□□□ 1.16
AP3S1-201ENST00000316788 ATP8A2Q9NTI2 1148 aa22.3■■□□□ 1.16
AP3S1-201ENST00000316788 SOCS7O14512 581 aa22.29■■□□□ 1.16
AP3S1-201ENST00000316788 ZSCAN12O43309 604 aa22.29■■□□□ 1.16
AP3S1-201ENST00000316788 SLFN14P0C7P3 912 aa22.29■■□□□ 1.16
AP3S1-201ENST00000316788 TRAPPC10P48553 1259 aa22.29■■□□□ 1.16
AP3S1-201ENST00000316788 SPECC1Q5M775 1068 aa22.29■■□□□ 1.16
AP3S1-201ENST00000316788 NSUN4Q96CB9 384 aaKnown RBP22.29■■□□□ 1.16
AP3S1-201ENST00000316788 NFE2L3Q9Y4A8 694 aa22.29■■□□□ 1.16
AP3S1-201ENST00000316788 DYNLL1P63167 89 aaKnown RBP22.28■■□□□ 1.16
AP3S1-201ENST00000316788 TRAPPC3LQ5T215 181 aa22.28■■□□□ 1.16
AP3S1-201ENST00000316788 C3orf67Q6ZVT6 689 aa22.28■■□□□ 1.16
AP3S1-201ENST00000316788 TMEM139Q8IV31 216 aa22.28■■□□□ 1.16
AP3S1-201ENST00000316788 CMTR1Q8N1G2 835 aaKnown RBP22.28■■□□□ 1.16
AP3S1-201ENST00000316788 CCDC82Q8N4S0 544 aa22.28■■□□□ 1.16
AP3S1-201ENST00000316788 ZNF384Q8TF68 577 aa22.28■■□□□ 1.16
AP3S1-201ENST00000316788 CRNKL1Q9BZJ0 848 aaKnown RBP22.28■■□□□ 1.16
AP3S1-201ENST00000316788 IQSEC3Q9UPP2 1182 aaPredicted RBP22.28■■□□□ 1.16
AP3S1-201ENST00000316788 CNTNAP5Q8WYK1 1306 aa22.28■■□□□ 1.16
AP3S1-201ENST00000316788 FMR1Q06787 632 aaKnown RBP eCLIP22.28■■□□□ 1.16
AP3S1-201ENST00000316788 SRRTQ9BXP5 876 aaKnown RBP22.28■■□□□ 1.16
AP3S1-201ENST00000316788 VPS54Q9P1Q0 977 aa22.28■■□□□ 1.16
AP3S1-201ENST00000316788 ARPP21Q9UBL0 812 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms