RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 ZNF592Q92610 1267 aa16.95■□□□□ 0.3
CLK4-201ENST00000316308 PRIMPOLQ96LW4 560 aa16.95■□□□□ 0.3
CLK4-201ENST00000316308 BPIFA3Q9BQP9 254 aa16.95■□□□□ 0.3
CLK4-201ENST00000316308 CNTNAP5Q8WYK1 1306 aa16.95■□□□□ 0.3
CLK4-201ENST00000316308 USP17L3A6NCW0 530 aa16.95■□□□□ 0.3
CLK4-201ENST00000316308 USP17L4A6NCW7 530 aa16.95■□□□□ 0.3
CLK4-201ENST00000316308 TMTC3Q6ZXV5 915 aa16.95■□□□□ 0.3
CLK4-201ENST00000316308 USP17L1Q7RTZ2 530 aa16.95■□□□□ 0.3
CLK4-201ENST00000316308 CPVLQ9H3G5 476 aa16.95■□□□□ 0.3
CLK4-201ENST00000316308 MAN1B1Q9UKM7 699 aa16.95■□□□□ 0.3
CLK4-201ENST00000316308 COBLO75128 1261 aa16.94■□□□□ 0.3
CLK4-201ENST00000316308 SLC35G1Q2M3R5 365 aa16.94■□□□□ 0.3
CLK4-201ENST00000316308 DZIP1Q86YF9 867 aaKnown RBP16.94■□□□□ 0.3
CLK4-201ENST00000316308 CRNKL1Q9BZJ0 848 aaKnown RBP16.94■□□□□ 0.3
CLK4-201ENST00000316308 PLCD1P51178 756 aa16.94■□□□□ 0.3
CLK4-201ENST00000316308 AKAP17AQ02040 695 aaKnown RBP16.94■□□□□ 0.3
CLK4-201ENST00000316308 TRAPPC3LQ5T215 181 aa16.94■□□□□ 0.3
CLK4-201ENST00000316308 RASGRP4Q8TDF6 673 aa16.94■□□□□ 0.3
CLK4-201ENST00000316308 GPKOWQ92917 476 aaPredicted RBP eCLIP16.94■□□□□ 0.34e-6■■■■□ 25.6
CLK4-201ENST00000316308 INTS13Q9NVM9 706 aa16.94■□□□□ 0.3
CLK4-201ENST00000316308 SAP30BPQ9UHR5 308 aaKnown RBP16.94■□□□□ 0.3
CLK4-201ENST00000316308 COL24A1Q17RW2 1714 aa16.94■□□□□ 0.3
CLK4-201ENST00000316308 TSPY2A6NKD2 308 aa16.93■□□□□ 0.3
CLK4-201ENST00000316308 PRPF3O43395 683 aaKnown RBP16.93■□□□□ 0.3
CLK4-201ENST00000316308 ACTN4O43707 911 aaKnown RBP16.93■□□□□ 0.3
CLK4-201ENST00000316308 AFMP43652 599 aa16.93■□□□□ 0.3
CLK4-201ENST00000316308 POSTNQ15063 836 aa16.93■□□□□ 0.3
CLK4-201ENST00000316308 ANKRD2Q9GZV1 360 aa16.93■□□□□ 0.3
CLK4-201ENST00000316308 MKRN1Q9UHC7 482 aaKnown RBP16.93■□□□□ 0.3
CLK4-201ENST00000316308 CDC25AP30304 524 aa16.93■□□□□ 0.3
CLK4-201ENST00000316308 TYW1BQ6NUM6 668 aa16.93■□□□□ 0.3
CLK4-201ENST00000316308 SMYD4Q8IYR2 804 aaPredicted RBP16.93■□□□□ 0.3
CLK4-201ENST00000316308 RGS22Q8NE09 1264 aa16.93■□□□□ 0.3
CLK4-201ENST00000316308 TNFRSF25Q93038 417 aa16.93■□□□□ 0.3
CLK4-201ENST00000316308 DHX58Q96C10 678 aa16.93■□□□□ 0.3
CLK4-201ENST00000316308 SRPRBQ9Y5M8 271 aaKnown RBP16.93■□□□□ 0.3
CLK4-201ENST00000316308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.92■□□□□ 0.3
CLK4-201ENST00000316308 TFAP4Q01664 338 aa16.92■□□□□ 0.3
CLK4-201ENST00000316308 PRR5LQ6MZQ0 368 aa16.92■□□□□ 0.3
CLK4-201ENST00000316308 TGFBRAP1Q8WUH2 860 aa16.92■□□□□ 0.3
CLK4-201ENST00000316308 MTA3Q9BTC8 594 aa16.92■□□□□ 0.3
CLK4-201ENST00000316308 ZNF831Q5JPB2 1677 aa16.92■□□□□ 0.3
CLK4-201ENST00000316308 GTF2F1P35269 517 aaKnown RBP eCLIP16.92■□□□□ 0.3
CLK4-201ENST00000316308 KRT2P35908 639 aa16.92■□□□□ 0.3
CLK4-201ENST00000316308 GPSM2P81274 684 aa16.92■□□□□ 0.3
CLK4-201ENST00000316308 E4F1Q66K89 784 aaPredicted RBP16.92■□□□□ 0.3
CLK4-201ENST00000316308 SBF2Q86WG5 1849 aa16.92■□□□□ 0.3
CLK4-201ENST00000316308 MAPKAPK5Q8IW41 473 aa16.92■□□□□ 0.3
CLK4-201ENST00000316308 FAM205AQ6ZU69 1335 aa16.91■□□□□ 0.3
CLK4-201ENST00000316308 SEMA3EO15041 775 aa16.91■□□□□ 0.3
CLK4-201ENST00000316308 IL17AQ16552 155 aa16.91■□□□□ 0.3
CLK4-201ENST00000316308 PIK3AP1Q6ZUJ8 805 aa16.91■□□□□ 0.3
CLK4-201ENST00000316308 CNBD1Q8NA66 436 aa16.91■□□□□ 0.3
CLK4-201ENST00000316308 SYMPKQ92797 1274 aaKnown RBP16.91■□□□□ 0.3
CLK4-201ENST00000316308 OSBPL5Q9H0X9 879 aaPredicted RBP16.91■□□□□ 0.3
CLK4-201ENST00000316308 TAF1LQ8IZX4 1826 aa16.91■□□□□ 0.3
CLK4-201ENST00000316308 KIAA1551Q9HCM1 1747 aa16.91■□□□□ 0.3
CLK4-201ENST00000316308 ORC4O43929 436 aa16.91■□□□□ 0.3
CLK4-201ENST00000316308 MYL5Q02045 173 aa16.91■□□□□ 0.3
CLK4-201ENST00000316308 VWA3AA6NCI4 1184 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 TRIM75PA6NK02 468 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 IKBKBO14920 756 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 LDHBP07195 334 aaKnown RBP16.9■□□□□ 0.3
CLK4-201ENST00000316308 GOLGA8HP0CJ92 632 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 RCAN1P53805 252 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 UBASH3AP57075 661 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 GRAPQ13588 217 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 OLFM4Q6UX06 510 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 GRAPLQ8TC17 118 aaPredicted RBP16.9■□□□□ 0.3
CLK4-201ENST00000316308 SAMSN1Q9NSI8 373 aaKnown RBP16.9■□□□□ 0.3
CLK4-201ENST00000316308 ATP8A2Q9NTI2 1148 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 SERPINC1P01008 464 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 USP5P45974 858 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 SARSP49591 514 aaKnown RBP16.9■□□□□ 0.3
CLK4-201ENST00000316308 PTGDRQ13258 359 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 CFAP100Q494V2 611 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 C12orf60Q5U649 245 aa16.9■□□□□ 0.3
CLK4-201ENST00000316308 CCAR2Q8N163 923 aaKnown RBP16.9■□□□□ 0.3
CLK4-201ENST00000316308 CD44P16070 742 aaKnown RBP16.89■□□□□ 0.3
CLK4-201ENST00000316308 GJD4Q96KN9 370 aaPredicted RBP16.89■□□□□ 0.3
CLK4-201ENST00000316308 NYAP1Q6ZVC0 841 aa16.89■□□□□ 0.29
CLK4-201ENST00000316308 CTCFLQ8NI51 663 aaPredicted RBP16.89■□□□□ 0.29
CLK4-201ENST00000316308 PDCL3Q9H2J4 239 aa16.89■□□□□ 0.29
CLK4-201ENST00000316308 SMTNL1A8MU46 457 aa16.88■□□□□ 0.29
CLK4-201ENST00000316308 MCM7P33993 719 aa16.88■□□□□ 0.29
CLK4-201ENST00000316308 STX17P56962 302 aa16.88■□□□□ 0.29
CLK4-201ENST00000316308 ARPP21Q9UBL0 812 aaPredicted RBP16.88■□□□□ 0.29
CLK4-201ENST00000316308 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLK4-201ENST00000316308 V9GYY5 206 aaPredicted RBP16.88■□□□□ 0.29
CLK4-201ENST00000316308 CCDC88AQ3V6T2 1871 aa16.88■□□□□ 0.29
CLK4-201ENST00000316308 DLEC1Q9Y238 1755 aa16.88■□□□□ 0.29
CLK4-201ENST00000316308 CYTH3O43739 400 aa16.88■□□□□ 0.29
CLK4-201ENST00000316308 DDAH1O94760 285 aa16.88■□□□□ 0.29
CLK4-201ENST00000316308 MORC3Q14149 939 aa16.88■□□□□ 0.29
CLK4-201ENST00000316308 BLZF1Q9H2G9 400 aa16.88■□□□□ 0.29
CLK4-201ENST00000316308 NFE2L3Q9Y4A8 694 aa16.88■□□□□ 0.29
CLK4-201ENST00000316308 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
CLK4-201ENST00000316308 UFL1O94874 794 aa16.87■□□□□ 0.29
CLK4-201ENST00000316308 SLURP2P0DP57 97 aa16.87■□□□□ 0.29
CLK4-201ENST00000316308 SCG2P13521 617 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms