RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 NACAP1Q9BZK3 213 aa19.65■□□□□ 0.74
SCAMP4-201ENST00000316097 GJB4Q9NTQ9 266 aa19.65■□□□□ 0.74
SCAMP4-201ENST00000316097 GGA1Q9UJY5 639 aa19.65■□□□□ 0.74
SCAMP4-201ENST00000316097 IKBKBO14920 756 aa19.64■□□□□ 0.73
SCAMP4-201ENST00000316097 SEMA3EO15041 775 aa19.64■□□□□ 0.73
SCAMP4-201ENST00000316097 TBC1D16Q8TBP0 767 aa19.64■□□□□ 0.73
SCAMP4-201ENST00000316097 MYL10Q9BUA6 226 aa19.64■□□□□ 0.73
SCAMP4-201ENST00000316097 BRIP1Q9BX63 1249 aa19.64■□□□□ 0.73
SCAMP4-201ENST00000316097 ZCCHC17Q9NP64 241 aaKnown RBP19.64■□□□□ 0.73
SCAMP4-201ENST00000316097 KLRG2A4D1S0 409 aaPredicted RBP19.64■□□□□ 0.73
SCAMP4-201ENST00000316097 SASH3O75995 380 aa19.64■□□□□ 0.73
SCAMP4-201ENST00000316097 SRGNP10124 158 aa19.64■□□□□ 0.73
SCAMP4-201ENST00000316097 DEFB132Q7Z7B7 95 aa19.64■□□□□ 0.73
SCAMP4-201ENST00000316097 ZNF219Q9P2Y4 722 aaPredicted RBP19.64■□□□□ 0.73
SCAMP4-201ENST00000316097 OAS2P29728 719 aaKnown RBP19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 RAD51AP2Q09MP3 1159 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 SYNE3Q6ZMZ3 975 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 SMARCE1Q969G3 411 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 HPS5Q9UPZ3 1129 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 GOLGA8BA8MQT2 603 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 PPEF1O14829 653 aaPredicted RBP19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 PRDM1O75626 825 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 TBC1D8O95759 1140 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 TPM1P09493 284 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 GNAT2P19087 354 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 AKNAD1Q5T1N1 836 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 MFSD6Q6ZSS7 791 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 CCDC34Q96HJ3 373 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 TMX1Q9H3N1 280 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 CD209Q9NNX6 404 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 MROH7-TTC4A0A0A0MT08 1334 aa19.63■□□□□ 0.73
SCAMP4-201ENST00000316097 CBFA2T2O43439 604 aa19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 GNL2Q13823 731 aaKnown RBP19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 ZNF804AQ7Z570 1209 aa19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 DZIP1Q86YF9 867 aaKnown RBP19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 TXLNBQ8N3L3 684 aa19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 CAMKK2Q96RR4 588 aa19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 CRAMP1Q96RY5 1269 aa19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 CACNA1SQ13698 1873 aa19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 VWA3AA6NCI4 1184 aa19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 TMEM232C9JQI7 657 aa19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 MARCKSP29966 332 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 PPARAQ07869 468 aa19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 SLC20A2Q08357 652 aa19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 AXDND1Q5T1B0 1012 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 CC2D1AQ6P1N0 951 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 FBXO18Q8NFZ0 1043 aa19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 ZNF622Q969S3 477 aaKnown RBP eCLIP19.62■□□□□ 0.73
SCAMP4-201ENST00000316097 KIF28PB7ZC32 967 aa19.61■□□□□ 0.73
SCAMP4-201ENST00000316097 ZSCAN12O43309 604 aa19.61■□□□□ 0.73
SCAMP4-201ENST00000316097 TOP1P11387 765 aaKnown RBP19.61■□□□□ 0.73
SCAMP4-201ENST00000316097 ANO1Q5XXA6 986 aa19.61■□□□□ 0.73
SCAMP4-201ENST00000316097 CHMP4CQ96CF2 233 aa19.61■□□□□ 0.73
SCAMP4-201ENST00000316097 ATP8B1O43520 1251 aa19.61■□□□□ 0.73
SCAMP4-201ENST00000316097 CMA1P23946 247 aa19.61■□□□□ 0.73
SCAMP4-201ENST00000316097 MYL5Q02045 173 aa19.61■□□□□ 0.73
SCAMP4-201ENST00000316097 SLC15A2Q16348 729 aa19.61■□□□□ 0.73
SCAMP4-201ENST00000316097 IGDCC4Q8TDY8 1250 aa19.61■□□□□ 0.73
SCAMP4-201ENST00000316097 UBXN6Q9BZV1 441 aa19.61■□□□□ 0.73
SCAMP4-201ENST00000316097 PPP2R2CQ9Y2T4 447 aa19.61■□□□□ 0.73
SCAMP4-201ENST00000316097 WDHD1O75717 1129 aaPredicted RBP19.6■□□□□ 0.73
SCAMP4-201ENST00000316097 LDHBP07195 334 aaKnown RBP19.6■□□□□ 0.73
SCAMP4-201ENST00000316097 ATP2B4P23634 1241 aa19.6■□□□□ 0.73
SCAMP4-201ENST00000316097 SMC1AQ14683 1233 aaKnown RBP19.6■□□□□ 0.73
SCAMP4-201ENST00000316097 BRAPQ7Z569 592 aa19.6■□□□□ 0.73
SCAMP4-201ENST00000316097 VSTM4Q8IW00 320 aa19.6■□□□□ 0.73
SCAMP4-201ENST00000316097 UTRNP46939 3433 aa19.6■□□□□ 0.73
SCAMP4-201ENST00000316097 USP17L12C9JPN9 530 aa19.6■□□□□ 0.73
SCAMP4-201ENST00000316097 USP17L21D6R901 530 aa19.6■□□□□ 0.73
SCAMP4-201ENST00000316097 KRBA2Q6ZNG9 492 aa19.6■□□□□ 0.73
SCAMP4-201ENST00000316097 ANGEL1Q9UNK9 670 aaKnown RBP19.6■□□□□ 0.73
SCAMP4-201ENST00000316097 SH2B2O14492 632 aaPredicted RBP19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 CYP2D6P10635 497 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 CASQ1P31415 396 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 SYKP43405 635 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 GNG11P61952 73 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 TMEM67Q5HYA8 995 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 FLAD1Q8NFF5 587 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 WDR24Q96S15 920 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 FEZ2Q9UHY8 353 aaPredicted RBP19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 IFIT3O14879 490 aaKnown RBP19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 CHRNA5P30532 468 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 CTR9Q6PD62 1173 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 NFXL1Q6ZNB6 911 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 MICU3Q86XE3 530 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 TRIM34Q9BYJ4 488 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 ARHGAP6O43182 974 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 PPP2R3AQ06190 1150 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 FCHSD1Q86WN1 690 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 FBXL16Q8N461 479 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 GPR161Q8N6U8 529 aaKnown RBP19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 TUBE1Q9UJT0 475 aa19.59■□□□□ 0.73
SCAMP4-201ENST00000316097 MYH13Q9UKX3 1938 aa19.58■□□□□ 0.73
SCAMP4-201ENST00000316097 GPS2Q13227 327 aa19.58■□□□□ 0.73
SCAMP4-201ENST00000316097 PNOCQ13519 176 aa19.58■□□□□ 0.73
SCAMP4-201ENST00000316097 DOK7Q18PE1 504 aa19.58■□□□□ 0.73
SCAMP4-201ENST00000316097 TMEM139Q8IV31 216 aa19.58■□□□□ 0.73
SCAMP4-201ENST00000316097 SP8Q8IXZ3 490 aa19.58■□□□□ 0.73
SCAMP4-201ENST00000316097 TSPYL1Q9H0U9 437 aa19.58■□□□□ 0.73
SCAMP4-201ENST00000316097 LY9Q9HBG7 655 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms