RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 TCP10Q12799 353 aa13.23□□□□□ -0.29
CTDSPL-202ENST00000310189 FOXD4L6Q3SYB3 417 aaPredicted RBP13.23□□□□□ -0.29
CTDSPL-202ENST00000310189 ATL3Q6DD88 541 aa13.23□□□□□ -0.29
CTDSPL-202ENST00000310189 FOXD4L3Q6VB84 417 aaPredicted RBP13.23□□□□□ -0.29
CTDSPL-202ENST00000310189 CDC37L1Q7L3B6 337 aa13.23□□□□□ -0.29
CTDSPL-202ENST00000310189 PNMA1Q8ND90 353 aa13.23□□□□□ -0.29
CTDSPL-202ENST00000310189 SCAND2PQ9GZW5 306 aaPredicted RBP13.23□□□□□ -0.29
CTDSPL-202ENST00000310189 TDRD3Q9H7E2 651 aaKnown RBP13.23□□□□□ -0.29
CTDSPL-202ENST00000310189 SENP2Q9HC62 589 aa13.23□□□□□ -0.29
CTDSPL-202ENST00000310189 ZC3H4Q9UPT8 1303 aaKnown RBP13.23□□□□□ -0.29
CTDSPL-202ENST00000310189 SMIM22K7EJ46 135 aa13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 MBD3O95983 291 aa13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 TOP1P11387 765 aaKnown RBP13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 CDC27P30260 824 aa13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 GMPSP49915 693 aaPredicted RBP13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 FOSBP53539 338 aa13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 FERMT3Q86UX7 667 aa13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 GPC2Q8N158 579 aa13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 MTMR14Q8NCE2 650 aa13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 SLC44A5Q8NCS7 719 aa13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 GMLQ99445 158 aa13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 DDX4Q9NQI0 724 aaKnown RBP13.22□□□□□ -0.29
CTDSPL-202ENST00000310189 DDX60LQ5H9U9 1706 aaKnown RBP13.21□□□□□ -0.29
CTDSPL-202ENST00000310189 GOLGA6L4A6NEF3 574 aa13.21□□□□□ -0.3
CTDSPL-202ENST00000310189 MPHOSPH10O00566 681 aaKnown RBP13.21□□□□□ -0.3
CTDSPL-202ENST00000310189 FKBP1CQ5VVH2 108 aa13.21□□□□□ -0.3
CTDSPL-202ENST00000310189 BRAPQ7Z569 592 aa13.21□□□□□ -0.3
CTDSPL-202ENST00000310189 FBXO18Q8NFZ0 1043 aa13.21□□□□□ -0.3
CTDSPL-202ENST00000310189 NKX2-3Q8TAU0 364 aa13.21□□□□□ -0.3
CTDSPL-202ENST00000310189 PHKBQ93100 1093 aa13.21□□□□□ -0.3
CTDSPL-202ENST00000310189 PRMT6Q96LA8 375 aaPredicted RBP13.21□□□□□ -0.3
CTDSPL-202ENST00000310189 LZTS2Q9BRK4 669 aa13.21□□□□□ -0.3
CTDSPL-202ENST00000310189 SBF1O95248 1867 aa13.21□□□□□ -0.3
CTDSPL-202ENST00000310189 ZNF646O15015 1829 aaPredicted RBP13.21□□□□□ -0.3
CTDSPL-202ENST00000310189 MYH8P13535 1937 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 DICER1Q9UPY3 1922 aaKnown RBP13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 NMT2O60551 498 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 DTNBO60941 627 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 FDPSP14324 419 aaKnown RBP13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 EVX2Q03828 476 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 TROAPQ12815 778 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 NFIAQ12857 509 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 NTRK3Q16288 839 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 DPY19L2Q6NUT2 758 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 FAM151AQ8WW52 585 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 DPF2Q92785 391 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 SYAP1Q96A49 352 aaPredicted RBP13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 VEZTQ9HBM0 779 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 BRMS1Q9HCU9 246 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 ZNF70Q9UC06 446 aaPredicted RBP13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 COL2A1P02458 1487 aaPredicted RBP13.2□□□□□ -0.3
CTDSPL-202ENST00000310189 DDNO94850 711 aaPredicted RBP13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 CACNB3P54284 484 aa13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 DNM1Q05193 864 aaKnown RBP13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 GABPAQ06546 454 aa13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 TNFAIP1Q13829 316 aa13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 CERKLQ49MI3 558 aaPredicted RBP13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 CCDC82Q8N4S0 544 aa13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 CSRNP1Q96S65 589 aa13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 MYOZ2Q9NPC6 264 aa13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 FAM217BQ9NTX9 383 aaPredicted RBP13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 LMBRD1Q9NUN5 540 aa13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 FAM198AQ9UFP1 575 aa13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 HERC5Q9UII4 1024 aaKnown RBP13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 ADAMTSL1Q8N6G6 1762 aa13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 PLIN4Q96Q06 1357 aa13.19□□□□□ -0.3
CTDSPL-202ENST00000310189 TCP10L2B9ZVM9 353 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 H7C1D1 291 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 FIBPO43427 364 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 PPFIA3O75145 1194 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 TTLL1O95922 423 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 LMOD1P29536 600 aaPredicted RBP13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 RESTQ13127 1097 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 KLHL40Q2TBA0 621 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 RCSD1Q6JBY9 416 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 TMTC3Q6ZXV5 915 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 USP48Q86UV5 1035 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 SPATA32Q96LK8 384 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 TMEM47Q9BQJ4 181 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 IL17RBQ9NRM6 502 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 CNOT7Q9UIV1 285 aaKnown RBP13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 CNPY2Q9Y2B0 182 aa13.18□□□□□ -0.3
CTDSPL-202ENST00000310189 CLRN2A0PK11 232 aa13.17□□□□□ -0.3
CTDSPL-202ENST00000310189 PARP1P09874 1014 aaKnown RBP13.17□□□□□ -0.3
CTDSPL-202ENST00000310189 ZNF280AP59817 542 aaPredicted RBP13.17□□□□□ -0.3
CTDSPL-202ENST00000310189 GRM4Q14833 912 aa13.17□□□□□ -0.3
CTDSPL-202ENST00000310189 KRT40Q6A162 431 aa13.17□□□□□ -0.3
CTDSPL-202ENST00000310189 FAM83AQ86UY5 434 aa13.17□□□□□ -0.3
CTDSPL-202ENST00000310189 TMEM87AQ8NBN3 555 aa13.17□□□□□ -0.3
CTDSPL-202ENST00000310189 CEP95Q96GE4 821 aa13.17□□□□□ -0.3
CTDSPL-202ENST00000310189 MTMR4Q9NYA4 1195 aa13.17□□□□□ -0.3
CTDSPL-202ENST00000310189 GPRC5DQ9NZD1 345 aa13.17□□□□□ -0.3
CTDSPL-202ENST00000310189 PCDHAC2Q9Y5I4 1007 aa13.17□□□□□ -0.3
CTDSPL-202ENST00000310189 UTRNP46939 3433 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms