RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 STK38Q15208 465 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 LMBRD1Q9NUN5 540 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 LAMA4Q16363 1823 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 DDAH1O94760 285 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 DEXIO95424 95 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 VIL1P09327 827 aaKnown RBP12.88□□□□□ -0.35
TRIM59-201ENST00000309784 IFNAR1P17181 557 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 FKBP1AP62942 108 aaKnown RBP12.88□□□□□ -0.35
TRIM59-201ENST00000309784 DGKHQ86XP1 1220 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 TMEM47Q9BQJ4 181 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRIM59-201ENST00000309784 BRMS1Q9HCU9 246 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
TRIM59-201ENST00000309784 SWAP70Q9UH65 585 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 MBD3O95983 291 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 MIGA2Q7L4E1 593 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 FBXO18Q8NFZ0 1043 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 VPS54Q9P1Q0 977 aa12.88□□□□□ -0.35
TRIM59-201ENST00000309784 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 GADD45BO75293 160 aaPredicted RBP12.87□□□□□ -0.35
TRIM59-201ENST00000309784 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 ME1P48163 572 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 SYAP1Q96A49 352 aaPredicted RBP12.87□□□□□ -0.35
TRIM59-201ENST00000309784 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
TRIM59-201ENST00000309784 PARP1P09874 1014 aaKnown RBP12.87□□□□□ -0.35
TRIM59-201ENST00000309784 CPVLQ9H3G5 476 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 GPCPD1Q9NPB8 672 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 IL17RBQ9NRM6 502 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 ZNF70Q9UC06 446 aaPredicted RBP12.87□□□□□ -0.35
TRIM59-201ENST00000309784 LRRC37AA6NMS7 1700 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 FRMPD2Q68DX3 1309 aaPredicted RBP12.87□□□□□ -0.35
TRIM59-201ENST00000309784 SHTN1A0MZ66 631 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 GUCY1A2P33402 732 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 DEKP35659 375 aaKnown RBP12.87□□□□□ -0.35
TRIM59-201ENST00000309784 GMPSP49915 693 aaPredicted RBP12.87□□□□□ -0.35
TRIM59-201ENST00000309784 NLRP5P59047 1200 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 SAMD7Q7Z3H4 446 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 AGBL3Q8NEM8 1001 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 NEDD1Q8NHV4 660 aa12.87□□□□□ -0.35
TRIM59-201ENST00000309784 H7C1D1 291 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 ZBTB22O15209 634 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 FMNL1O95466 1100 aaPredicted RBP12.86□□□□□ -0.35
TRIM59-201ENST00000309784 PPP2R5BQ15173 497 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 NBPF9Q3BBW0 867 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 USP17L2Q6R6M4 530 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 FAM198AQ9UFP1 575 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 TOP1P11387 765 aaKnown RBP12.86□□□□□ -0.35
TRIM59-201ENST00000309784 TNNI2P48788 182 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 TROAPQ12815 778 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 GPR162Q16538 588 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 HEATR3Q7Z4Q2 680 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 FTOQ9C0B1 505 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRIM59-201ENST00000309784 SEC63Q9UGP8 760 aaKnown RBP12.86□□□□□ -0.35
TRIM59-201ENST00000309784 GNAQP50148 359 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 VPS33BQ9H267 617 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 MYOZ2Q9NPC6 264 aa12.86□□□□□ -0.35
TRIM59-201ENST00000309784 FAM217BQ9NTX9 383 aaPredicted RBP12.86□□□□□ -0.35
TRIM59-201ENST00000309784 CNOT7Q9UIV1 285 aaKnown RBP12.86□□□□□ -0.35
TRIM59-201ENST00000309784 FGRP09769 529 aa12.85□□□□□ -0.35
TRIM59-201ENST00000309784 KLHL40Q2TBA0 621 aa12.85□□□□□ -0.35
TRIM59-201ENST00000309784 DIS3L2Q8IYB7 885 aaKnown RBP12.85□□□□□ -0.35
TRIM59-201ENST00000309784 STAG2Q8N3U4 1231 aa12.85□□□□□ -0.35
TRIM59-201ENST00000309784 UBA5Q9GZZ9 404 aa12.85□□□□□ -0.35
TRIM59-201ENST00000309784 KLRF2D3W0D1 207 aa12.85□□□□□ -0.35
TRIM59-201ENST00000309784 RESTQ13127 1097 aa12.85□□□□□ -0.35
TRIM59-201ENST00000309784 ABCB5Q2M3G0 1257 aa12.85□□□□□ -0.35
TRIM59-201ENST00000309784 RASGRP2Q7LDG7 609 aa12.85□□□□□ -0.35
TRIM59-201ENST00000309784 TMEM39BQ9GZU3 492 aa12.85□□□□□ -0.35
TRIM59-201ENST00000309784 RNF181Q9P0P0 153 aa12.85□□□□□ -0.35
TRIM59-201ENST00000309784 ZYXQ15942 572 aaKnown RBP12.85□□□□□ -0.35
TRIM59-201ENST00000309784 TMTC3Q6ZXV5 915 aa12.85□□□□□ -0.35
TRIM59-201ENST00000309784 FOXP4Q8IVH2 680 aaPredicted RBP12.85□□□□□ -0.35
TRIM59-201ENST00000309784 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
TRIM59-201ENST00000309784 TTLL1O95922 423 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 ICA1Q05084 483 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 GPKOWQ92917 476 aaPredicted RBP eCLIP12.84□□□□□ -0.35
TRIM59-201ENST00000309784 CCDC17Q96LX7 622 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 MRIQ9BWK5 157 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 RNF26Q9BY78 433 aaPredicted RBP12.84□□□□□ -0.35
TRIM59-201ENST00000309784 BTBD18B2RXH4 712 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 NTRK3Q16288 839 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 RCSD1Q6JBY9 416 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 IDI2Q9BXS1 227 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 SCN9AQ15858 1988 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 GH2P01242 217 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 UBE2HP62256 183 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 SEPT2Q15019 361 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 SRBD1Q8N5C6 995 aaKnown RBP12.84□□□□□ -0.35
TRIM59-201ENST00000309784 USP28Q96RU2 1077 aa12.84□□□□□ -0.35
TRIM59-201ENST00000309784 MAST2Q6P0Q8 1798 aa12.83□□□□□ -0.35
TRIM59-201ENST00000309784 WNT10BO00744 389 aa12.83□□□□□ -0.36
TRIM59-201ENST00000309784 ENTPD3O75355 529 aa12.83□□□□□ -0.36
TRIM59-201ENST00000309784 CLEC17AQ6ZS10 378 aa12.83□□□□□ -0.36
TRIM59-201ENST00000309784 SYT17Q9BSW7 474 aa12.83□□□□□ -0.36
TRIM59-201ENST00000309784 GOLGA6L3A6NEY3 463 aa12.83□□□□□ -0.36
TRIM59-201ENST00000309784 SHMT1P34896 483 aa12.83□□□□□ -0.36
TRIM59-201ENST00000309784 FEZ1Q99689 392 aa12.83□□□□□ -0.36
TRIM59-201ENST00000309784 MTMR4Q9NYA4 1195 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms