RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 SMCR8Q8TEV9 937 aaPredicted RBP20.16■□□□□ 0.82
NDUFA3-201ENST00000303553 SH2D4AQ9H788 454 aa20.16■□□□□ 0.82
NDUFA3-201ENST00000303553 DGKZQ13574 1117 aa20.15■□□□□ 0.82
NDUFA3-201ENST00000303553 KIF22Q14807 665 aa20.15■□□□□ 0.82
NDUFA3-201ENST00000303553 SEPT2Q15019 361 aa20.15■□□□□ 0.82
NDUFA3-201ENST00000303553 KIAA1683Q9H0B3 1180 aa20.15■□□□□ 0.82
NDUFA3-201ENST00000303553 ARHGEF10LQ9HCE6 1279 aa20.15■□□□□ 0.82
NDUFA3-201ENST00000303553 ZMYM6O95789 1325 aa20.15■□□□□ 0.82
NDUFA3-201ENST00000303553 GSPT1P15170 499 aaKnown RBP20.14■□□□□ 0.81
NDUFA3-201ENST00000303553 ICA1Q05084 483 aa20.14■□□□□ 0.81
NDUFA3-201ENST00000303553 PPARAQ07869 468 aa20.14■□□□□ 0.81
NDUFA3-201ENST00000303553 ALX1Q15699 326 aa20.14■□□□□ 0.81
NDUFA3-201ENST00000303553 TREML2Q5T2D2 321 aa20.14■□□□□ 0.81
NDUFA3-201ENST00000303553 CWC27Q6UX04 472 aaKnown RBP20.14■□□□□ 0.81
NDUFA3-201ENST00000303553 C12orf42Q96LP6 360 aa20.14■□□□□ 0.81
NDUFA3-201ENST00000303553 ADGRA2Q96PE1 1338 aa20.13■□□□□ 0.81
NDUFA3-201ENST00000303553 CYP2C8P10632 490 aa20.13■□□□□ 0.81
NDUFA3-201ENST00000303553 AKR1B1P15121 316 aa20.13■□□□□ 0.81
NDUFA3-201ENST00000303553 GUCY1A2P33402 732 aa20.13■□□□□ 0.81
NDUFA3-201ENST00000303553 IRX3P78415 501 aaPredicted RBP20.13■□□□□ 0.81
NDUFA3-201ENST00000303553 ERICH6BQ5W0A0 696 aa20.13■□□□□ 0.81
NDUFA3-201ENST00000303553 ZNF444Q8N0Y2 327 aaPredicted RBP20.13■□□□□ 0.81
NDUFA3-201ENST00000303553 RUFY2Q8WXA3 655 aa20.13■□□□□ 0.81
NDUFA3-201ENST00000303553 KANSL2Q9H9L4 492 aa20.13■□□□□ 0.81
NDUFA3-201ENST00000303553 GREB1LQ9C091 1923 aaPredicted RBP20.13■□□□□ 0.81
NDUFA3-201ENST00000303553 RAD50Q92878 1312 aa20.12■□□□□ 0.81
NDUFA3-201ENST00000303553 HSPD1P10809 573 aaKnown RBP20.12■□□□□ 0.81
NDUFA3-201ENST00000303553 HOXA7P31268 230 aaPredicted RBP20.12■□□□□ 0.81
NDUFA3-201ENST00000303553 VPS53Q5VIR6 699 aa20.12■□□□□ 0.81
NDUFA3-201ENST00000303553 C17orf99Q6UX52 265 aa20.12■□□□□ 0.81
NDUFA3-201ENST00000303553 ZNF589Q86UQ0 364 aaPredicted RBP20.12■□□□□ 0.81
NDUFA3-201ENST00000303553 MCOLN1Q9GZU1 580 aa20.12■□□□□ 0.81
NDUFA3-201ENST00000303553 FOXP2O15409 715 aa20.11■□□□□ 0.81
NDUFA3-201ENST00000303553 RASA1P20936 1047 aa20.11■□□□□ 0.81
NDUFA3-201ENST00000303553 GCLCP48506 637 aaPredicted RBP20.11■□□□□ 0.81
NDUFA3-201ENST00000303553 ZYXQ15942 572 aaKnown RBP20.11■□□□□ 0.81
NDUFA3-201ENST00000303553 CD99L2Q8TCZ2 262 aa20.11■□□□□ 0.81
NDUFA3-201ENST00000303553 GTF3C2Q8WUA4 911 aaPredicted RBP20.11■□□□□ 0.81
NDUFA3-201ENST00000303553 CPA4Q9UI42 421 aa20.11■□□□□ 0.81
NDUFA3-201ENST00000303553 SMIM22K7EJ46 135 aa20.1■□□□□ 0.81
NDUFA3-201ENST00000303553 GNRH1P01148 92 aa20.1■□□□□ 0.81
NDUFA3-201ENST00000303553 LACTBP83111 547 aaPredicted RBP20.1■□□□□ 0.81
NDUFA3-201ENST00000303553 STK11IPQ8N1F8 1099 aa20.1■□□□□ 0.81
NDUFA3-201ENST00000303553 LPAR1Q92633 364 aa20.1■□□□□ 0.81
NDUFA3-201ENST00000303553 ASCC2Q9H1I8 757 aaPredicted RBP20.1■□□□□ 0.81
NDUFA3-201ENST00000303553 EFCC1Q9HA90 598 aa20.1■□□□□ 0.81
NDUFA3-201ENST00000303553 EMILIN3Q9NT22 766 aa20.1■□□□□ 0.81
NDUFA3-201ENST00000303553 ANAPC4Q9UJX5 808 aa20.1■□□□□ 0.81
NDUFA3-201ENST00000303553 TRIM17Q9Y577 477 aa20.1■□□□□ 0.81
NDUFA3-201ENST00000303553 LAMA4Q16363 1823 aa20.1■□□□□ 0.81
NDUFA3-201ENST00000303553 FGAP02671 866 aa20.09■□□□□ 0.81
NDUFA3-201ENST00000303553 BCRP11274 1271 aa20.09■□□□□ 0.81
NDUFA3-201ENST00000303553 PPP4R3BQ5MIZ7 849 aa20.09■□□□□ 0.81
NDUFA3-201ENST00000303553 ACER1Q8TDN7 264 aa20.09■□□□□ 0.81
NDUFA3-201ENST00000303553 PLIN4Q96Q06 1357 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 USP17L15C9J2P7 530 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 USP17L13C9JLJ4 530 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 USP17L11C9JVI0 530 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 USP17L18D6R9N7 530 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 USP17L22D6RA61 530 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 USP17L17D6RBQ6 530 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 USP17L19D6RCP7 530 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 USP17L20D6RJB6 530 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 TSPY3P0CV98 308 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 TSPY8P0CW00 308 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 PCP11498 1178 aaKnown RBP20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 VCAM1P19320 739 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 USP17L24Q0WX57 530 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 FAM110CQ1W6H9 321 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 FBXO46Q6PJ61 603 aaPredicted RBP20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 OTOP1Q7RTM1 612 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 DSCC1Q9BVC3 393 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 GOPCQ9HD26 462 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 TMX2Q9Y320 296 aa20.08■□□□□ 0.81
NDUFA3-201ENST00000303553 MGAMO43451 1857 aa20.07■□□□□ 0.8
NDUFA3-201ENST00000303553 PRDM1O75626 825 aa20.07■□□□□ 0.8
NDUFA3-201ENST00000303553 SYNPO2Q9UMS6 1093 aa20.07■□□□□ 0.8
NDUFA3-201ENST00000303553 MYH4Q9Y623 1939 aa20.07■□□□□ 0.8
NDUFA3-201ENST00000303553 A0A1W2PRG0 241 aa20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 EEF2P13639 858 aaKnown RBP20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 NT5C2P49902 561 aa20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 PRMT2P55345 433 aa20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 FCGRTP55899 365 aa20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 HERVK_113P62684 666 aa20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 ATP2B2Q01814 1243 aa20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 ANKRD13CQ8N6S4 541 aa20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 ABHD8Q96I13 439 aa20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 RNF41Q9H4P4 317 aaPredicted RBP20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 VCPKMTQ9H867 229 aa20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 NYAP2Q9P242 653 aa20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 CTNNA3Q9UI47 895 aa20.06■□□□□ 0.8
NDUFA3-201ENST00000303553 TSPY2A6NKD2 308 aa20.05■□□□□ 0.8
NDUFA3-201ENST00000303553 ORC4O43929 436 aa20.05■□□□□ 0.8
NDUFA3-201ENST00000303553 CHMLP26374 656 aa20.05■□□□□ 0.8
NDUFA3-201ENST00000303553 HOXD10P28358 340 aa20.05■□□□□ 0.8
NDUFA3-201ENST00000303553 CTDSPL2Q05D32 466 aa20.05■□□□□ 0.8
NDUFA3-201ENST00000303553 BMP2KLQ5H9B9 411 aa20.05■□□□□ 0.8
NDUFA3-201ENST00000303553 CLEC10AQ8IUN9 316 aa20.05■□□□□ 0.8
NDUFA3-201ENST00000303553 NEDD1Q8NHV4 660 aa20.05■□□□□ 0.8
NDUFA3-201ENST00000303553 RPAP3Q9H6T3 665 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms