RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 FANCLQ9NW38 375 aa21.38■■□□□ 1.01
RNF139-201ENST00000303545 MDM2Q00987 491 aaPredicted RBP21.38■■□□□ 1.01
RNF139-201ENST00000303545 OLFM4Q6UX06 510 aa21.38■■□□□ 1.01
RNF139-201ENST00000303545 TMTC3Q6ZXV5 915 aa21.38■■□□□ 1.01
RNF139-201ENST00000303545 CNBD1Q8NA66 436 aa21.38■■□□□ 1.01
RNF139-201ENST00000303545 SAP30BPQ9UHR5 308 aaKnown RBP21.38■■□□□ 1.01
RNF139-201ENST00000303545 SERPINC1P01008 464 aa21.37■■□□□ 1.01
RNF139-201ENST00000303545 FGRP09769 529 aa21.37■■□□□ 1.01
RNF139-201ENST00000303545 XBP1P17861 261 aa21.37■■□□□ 1.01
RNF139-201ENST00000303545 POSTNQ15063 836 aa21.37■■□□□ 1.01
RNF139-201ENST00000303545 ARMCX5Q6P1M9 558 aa21.37■■□□□ 1.01
RNF139-201ENST00000303545 TRMT44Q8IYL2 757 aaKnown RBP21.37■■□□□ 1.01
RNF139-201ENST00000303545 CTCFLQ8NI51 663 aaPredicted RBP21.37■■□□□ 1.01
RNF139-201ENST00000303545 ZNF831Q5JPB2 1677 aa21.37■■□□□ 1.01
RNF139-201ENST00000303545 A0A087X0B3 334 aa21.37■■□□□ 1.01
RNF139-201ENST00000303545 TRIM75PA6NK02 468 aa21.37■■□□□ 1.01
RNF139-201ENST00000303545 RCAN1P53805 252 aa21.37■■□□□ 1.01
RNF139-201ENST00000303545 SLC44A5Q8NCS7 719 aa21.37■■□□□ 1.01
RNF139-201ENST00000303545 DHX58Q96C10 678 aa21.37■■□□□ 1.01
RNF139-201ENST00000303545 MAN1B1Q9UKM7 699 aa21.37■■□□□ 1.01
RNF139-201ENST00000303545 SRPRBQ9Y5M8 271 aaKnown RBP21.37■■□□□ 1.01
RNF139-201ENST00000303545 CNTNAP5Q8WYK1 1306 aa21.36■■□□□ 1.01
RNF139-201ENST00000303545 LDHBP07195 334 aaKnown RBP21.36■■□□□ 1.01
RNF139-201ENST00000303545 AFMP43652 599 aa21.36■■□□□ 1.01
RNF139-201ENST00000303545 TFAP4Q01664 338 aa21.36■■□□□ 1.01
RNF139-201ENST00000303545 MYL5Q02045 173 aa21.36■■□□□ 1.01
RNF139-201ENST00000303545 ATP8A2Q9NTI2 1148 aa21.36■■□□□ 1.01
RNF139-201ENST00000303545 ZNF710Q8N1W2 664 aa21.36■■□□□ 1.01
RNF139-201ENST00000303545 TGFBRAP1Q8WUH2 860 aa21.36■■□□□ 1.01
RNF139-201ENST00000303545 RBM28Q9NW13 759 aaKnown RBP21.36■■□□□ 1.01
RNF139-201ENST00000303545 IRS2Q9Y4H2 1338 aa21.35■■□□□ 1.01
RNF139-201ENST00000303545 COL24A1Q17RW2 1714 aa21.35■■□□□ 1.01
RNF139-201ENST00000303545 USP17L3A6NCW0 530 aa21.35■■□□□ 1.01
RNF139-201ENST00000303545 USP17L4A6NCW7 530 aa21.35■■□□□ 1.01
RNF139-201ENST00000303545 TMEM232C9JQI7 657 aa21.35■■□□□ 1.01
RNF139-201ENST00000303545 MEX3CQ5U5Q3 659 aaKnown RBP21.35■■□□□ 1.01
RNF139-201ENST00000303545 USP17L1Q7RTZ2 530 aa21.35■■□□□ 1.01
RNF139-201ENST00000303545 UBASH3AP57075 661 aa21.35■■□□□ 1.01
RNF139-201ENST00000303545 GRAPQ13588 217 aa21.35■■□□□ 1.01
RNF139-201ENST00000303545 NPY5RQ15761 445 aa21.35■■□□□ 1.01
RNF139-201ENST00000303545 CFAP100Q494V2 611 aa21.35■■□□□ 1.01
RNF139-201ENST00000303545 GRAPLQ8TC17 118 aaPredicted RBP21.35■■□□□ 1.01
RNF139-201ENST00000303545 STAMQ92783 540 aa21.35■■□□□ 1.01
RNF139-201ENST00000303545 GPKOWQ92917 476 aaPredicted RBP eCLIP21.35■■□□□ 1.01
RNF139-201ENST00000303545 ARPP21Q9UBL0 812 aaPredicted RBP21.35■■□□□ 1.01
RNF139-201ENST00000303545 CCDC88AQ3V6T2 1871 aa21.34■■□□□ 1.01
RNF139-201ENST00000303545 IKBKBO14920 756 aa21.34■■□□□ 1.01
RNF139-201ENST00000303545 ORC4O43929 436 aa21.34■■□□□ 1.01
RNF139-201ENST00000303545 FMR1Q06787 632 aaKnown RBP eCLIP21.34■■□□□ 1.01
RNF139-201ENST00000303545 RCSD1Q6JBY9 416 aa21.34■■□□□ 1.01
RNF139-201ENST00000303545 PIK3AP1Q6ZUJ8 805 aa21.34■■□□□ 1.01
RNF139-201ENST00000303545 MAPKAPK5Q8IW41 473 aa21.34■■□□□ 1.01
RNF139-201ENST00000303545 CEP131Q9UPN4 1083 aa21.34■■□□□ 1.01
RNF139-201ENST00000303545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.34■■□□□ 1.01
RNF139-201ENST00000303545 DDAH1O94760 285 aa21.34■■□□□ 1.01
RNF139-201ENST00000303545 STAG2Q8N3U4 1231 aa21.34■■□□□ 1.01
RNF139-201ENST00000303545 IL17RBQ9NRM6 502 aa21.34■■□□□ 1.01
RNF139-201ENST00000303545 ACTN4O43707 911 aaKnown RBP21.33■■□□□ 1.01
RNF139-201ENST00000303545 CALM1P0DP23 149 aa21.33■■□□□ 1.01
RNF139-201ENST00000303545 CALM2P0DP24 149 aa21.33■■□□□ 1.01
RNF139-201ENST00000303545 CALM3P0DP25 149 aa21.33■■□□□ 1.01
RNF139-201ENST00000303545 NLRP5P59047 1200 aa21.33■■□□□ 1.01
RNF139-201ENST00000303545 GPSM2P81274 684 aa21.33■■□□□ 1.01
RNF139-201ENST00000303545 RASGRP2Q7LDG7 609 aa21.33■■□□□ 1.01
RNF139-201ENST00000303545 VWA3AA6NCI4 1184 aa21.33■■□□□ 1
RNF139-201ENST00000303545 PPP2R5BQ15173 497 aa21.33■■□□□ 1
RNF139-201ENST00000303545 PRR5LQ6MZQ0 368 aa21.33■■□□□ 1
RNF139-201ENST00000303545 SYMPKQ92797 1274 aaKnown RBP21.33■■□□□ 1
RNF139-201ENST00000303545 SMARCE1Q969G3 411 aa21.33■■□□□ 1
RNF139-201ENST00000303545 NEMFO60524 1076 aa21.32■■□□□ 1
RNF139-201ENST00000303545 RPGRQ92834 1020 aaKnown RBP21.32■■□□□ 1
RNF139-201ENST00000303545 OSBPL5Q9H0X9 879 aaPredicted RBP21.32■■□□□ 1
RNF139-201ENST00000303545 PDCL3Q9H2J4 239 aa21.32■■□□□ 1
RNF139-201ENST00000303545 MKNK2Q9HBH9 465 aa21.32■■□□□ 1
RNF139-201ENST00000303545 TAF1LQ8IZX4 1826 aa21.32■■□□□ 1
RNF139-201ENST00000303545 PLCD1P51178 756 aa21.32■■□□□ 1
RNF139-201ENST00000303545 CEP135Q66GS9 1140 aa21.32■■□□□ 1
RNF139-201ENST00000303545 SPTY2D1Q68D10 685 aaPredicted RBP21.32■■□□□ 1
RNF139-201ENST00000303545 RASGRP4Q8TDF6 673 aa21.32■■□□□ 1
RNF139-201ENST00000303545 KAT14Q9H8E8 782 aa21.32■■□□□ 1
RNF139-201ENST00000303545 SBF2Q86WG5 1849 aa21.31■■□□□ 1
RNF139-201ENST00000303545 SFPQP23246 707 aaKnown RBP eCLIP21.31■■□□□ 1
RNF139-201ENST00000303545 MCM7P33993 719 aa21.31■■□□□ 1
RNF139-201ENST00000303545 GTF2F1P35269 517 aaKnown RBP eCLIP21.31■■□□□ 1
RNF139-201ENST00000303545 GSDMDP57764 484 aa21.31■■□□□ 1
RNF139-201ENST00000303545 NAA30Q147X3 362 aaPredicted RBP21.31■■□□□ 1
RNF139-201ENST00000303545 GJD4Q96KN9 370 aaPredicted RBP21.31■■□□□ 1
RNF139-201ENST00000303545 BRMS1Q9HCU9 246 aa21.31■■□□□ 1
RNF139-201ENST00000303545 NHSQ6T4R5 1651 aa21.31■■□□□ 1
RNF139-201ENST00000303545 COBLO75128 1261 aa21.31■■□□□ 1
RNF139-201ENST00000303545 UFL1O94874 794 aa21.31■■□□□ 1
RNF139-201ENST00000303545 SCG2P13521 617 aa21.31■■□□□ 1
RNF139-201ENST00000303545 PTGDRQ13258 359 aa21.31■■□□□ 1
RNF139-201ENST00000303545 TTC38Q5R3I4 469 aa21.31■■□□□ 1
RNF139-201ENST00000303545 C12orf60Q5U649 245 aa21.31■■□□□ 1
RNF139-201ENST00000303545 CPVLQ9H3G5 476 aa21.31■■□□□ 1
RNF139-201ENST00000303545 KIAA1551Q9HCM1 1747 aa21.31■■□□□ 1
RNF139-201ENST00000303545 LAMB1P07942 1786 aa21.31■■□□□ 1
RNF139-201ENST00000303545 PCP11498 1178 aaKnown RBP21.3■■□□□ 1
RNF139-201ENST00000303545 PDS5AQ29RF7 1337 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms