RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 PTCH2Q9Y6C5 1203 aa13.57□□□□□ -0.24
CLCC1-201ENST00000302500 COL11A1P12107 1806 aaPredicted RBP13.57□□□□□ -0.24
CLCC1-201ENST00000302500 MYH4Q9Y623 1939 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 USP17L10C9JJH3 530 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 ERC2O15083 957 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 CNMDO75829 334 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 GNRH1P01148 92 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 AKR1B1P15121 316 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 OSBPP22059 807 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 PDE4AP27815 886 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 CDK8P49336 464 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 SEPT2Q15019 361 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 FAM110CQ1W6H9 321 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 ABCB5Q2M3G0 1257 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 TICAM2Q86XR7 235 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 GPATCH3Q96I76 525 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 LNPKQ9C0E8 428 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 AS3MTQ9HBK9 375 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 SWAP70Q9UH65 585 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 SLC4A4Q9Y6R1 1079 aa13.56□□□□□ -0.24
CLCC1-201ENST00000302500 RANBP2P49792 3224 aaKnown RBP13.55□□□□□ -0.24
CLCC1-201ENST00000302500 ZNF236Q9UL36 1845 aa13.55□□□□□ -0.24
CLCC1-201ENST00000302500 IGKV6D-41A0A0C4DH26 115 aa13.55□□□□□ -0.24
CLCC1-201ENST00000302500 CCDC85CA6NKD9 419 aa13.55□□□□□ -0.24
CLCC1-201ENST00000302500 PEX10O60683 326 aa13.55□□□□□ -0.24
CLCC1-201ENST00000302500 LBX2Q6XYB7 198 aa13.55□□□□□ -0.24
CLCC1-201ENST00000302500 CHD1LQ86WJ1 897 aa13.55□□□□□ -0.24
CLCC1-201ENST00000302500 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
CLCC1-201ENST00000302500 RBPJLQ9UBG7 517 aa13.55□□□□□ -0.24
CLCC1-201ENST00000302500 SRRDQ9UH36 339 aa13.55□□□□□ -0.24
CLCC1-201ENST00000302500 PLIN4Q96Q06 1357 aa13.54□□□□□ -0.24
CLCC1-201ENST00000302500 IGHA2P01877 340 aa13.54□□□□□ -0.24
CLCC1-201ENST00000302500 POLR3DP05423 398 aaPredicted RBP13.54□□□□□ -0.24
CLCC1-201ENST00000302500 VCAM1P19320 739 aa13.54□□□□□ -0.24
CLCC1-201ENST00000302500 RASA1P20936 1047 aa13.54□□□□□ -0.24
CLCC1-201ENST00000302500 P2RX7Q99572 595 aaKnown RBP13.54□□□□□ -0.24
CLCC1-201ENST00000302500 ARPP21Q9UBL0 812 aaPredicted RBP13.54□□□□□ -0.24
CLCC1-201ENST00000302500 GJD2Q9UKL4 321 aa13.54□□□□□ -0.24
CLCC1-201ENST00000302500 GABRQQ9UN88 632 aa13.54□□□□□ -0.24
CLCC1-201ENST00000302500 POTEFA5A3E0 1075 aa13.53□□□□□ -0.24
CLCC1-201ENST00000302500 PSMC4P43686 418 aa13.53□□□□□ -0.24
CLCC1-201ENST00000302500 HERVK_113P62684 666 aa13.53□□□□□ -0.24
CLCC1-201ENST00000302500 VPS53Q5VIR6 699 aa13.53□□□□□ -0.24
CLCC1-201ENST00000302500 TMEM179Q6ZVK1 233 aa13.53□□□□□ -0.24
CLCC1-201ENST00000302500 IFNL3Q8IZI9 196 aa13.53□□□□□ -0.24
CLCC1-201ENST00000302500 EVI5LQ96CN4 794 aa13.53□□□□□ -0.24
CLCC1-201ENST00000302500 RWDD1Q9H446 243 aaPredicted RBP13.53□□□□□ -0.24
CLCC1-201ENST00000302500 TMX2Q9Y320 296 aa13.53□□□□□ -0.24
CLCC1-201ENST00000302500 A0A0D9SFI3 127 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 PATL2C9JE40 543 aaKnown RBP13.52□□□□□ -0.25
CLCC1-201ENST00000302500 FGRP09769 529 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 GCLCP48506 637 aaPredicted RBP13.52□□□□□ -0.25
CLCC1-201ENST00000302500 NOVP48745 357 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 PRMT2P55345 433 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 SOX10P56693 466 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 PRKCZQ05513 592 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 Q3C1V9 767 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 USP17L2Q6R6M4 530 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 CATSPERGQ6ZRH7 1159 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 CCDC129Q6ZRS4 1044 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 ZNF589Q86UQ0 364 aaPredicted RBP13.52□□□□□ -0.25
CLCC1-201ENST00000302500 ANKRD13CQ8N6S4 541 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 NKX2-3Q8TAU0 364 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 USP6NLQ92738 828 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 FAM227BQ96M60 508 aa13.52□□□□□ -0.25
CLCC1-201ENST00000302500 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.52□□□□□ -0.25
CLCC1-201ENST00000302500 FRMPD3Q5JV73 1810 aa13.51□□□□□ -0.25
CLCC1-201ENST00000302500 GNAT2P19087 354 aa13.51□□□□□ -0.25
CLCC1-201ENST00000302500 IRF5Q13568 498 aa13.51□□□□□ -0.25
CLCC1-201ENST00000302500 RAB3GAP1Q15042 981 aa13.51□□□□□ -0.25
CLCC1-201ENST00000302500 CCDC17Q96LX7 622 aa13.51□□□□□ -0.25
CLCC1-201ENST00000302500 FSD1Q9BTV5 496 aa13.51□□□□□ -0.25
CLCC1-201ENST00000302500 NBPF3Q9H094 633 aa13.51□□□□□ -0.25
CLCC1-201ENST00000302500 IL25Q9H293 177 aa13.51□□□□□ -0.25
CLCC1-201ENST00000302500 PNMA3Q9UL41 463 aa13.51□□□□□ -0.25
CLCC1-201ENST00000302500 ZMYM6O95789 1325 aa13.51□□□□□ -0.25
CLCC1-201ENST00000302500 DNAH12Q6ZR08 3092 aa13.5□□□□□ -0.25
CLCC1-201ENST00000302500 SPDYE16A6NNV3 312 aaPredicted RBP13.5□□□□□ -0.25
CLCC1-201ENST00000302500 GSPT1P15170 499 aaKnown RBP13.5□□□□□ -0.25
CLCC1-201ENST00000302500 ALX1Q15699 326 aa13.5□□□□□ -0.25
CLCC1-201ENST00000302500 B4GALNT3Q6L9W6 998 aa13.5□□□□□ -0.25
CLCC1-201ENST00000302500 SHISA4Q96DD7 197 aa13.5□□□□□ -0.25
CLCC1-201ENST00000302500 PORCNQ9H237 461 aa13.5□□□□□ -0.25
CLCC1-201ENST00000302500 BTBD7Q9P203 1132 aa13.5□□□□□ -0.25
CLCC1-201ENST00000302500 ANAPC4Q9UJX5 808 aa13.5□□□□□ -0.25
CLCC1-201ENST00000302500 ADAMTS5Q9UNA0 930 aa13.5□□□□□ -0.25
CLCC1-201ENST00000302500 ZNFX1Q9P2E3 1918 aaKnown RBP13.49□□□□□ -0.25
CLCC1-201ENST00000302500 MYPNQ86TC9 1320 aa13.49□□□□□ -0.25
CLCC1-201ENST00000302500 USP14P54578 494 aa13.49□□□□□ -0.25
CLCC1-201ENST00000302500 IRX6P78412 446 aaPredicted RBP13.49□□□□□ -0.25
CLCC1-201ENST00000302500 PABPC4Q13310 644 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLCC1-201ENST00000302500 UBE2Q1Q7Z7E8 422 aa13.49□□□□□ -0.25
CLCC1-201ENST00000302500 SMCR8Q8TEV9 937 aaPredicted RBP13.49□□□□□ -0.25
CLCC1-201ENST00000302500 SH3TC2Q8TF17 1288 aa13.49□□□□□ -0.25
CLCC1-201ENST00000302500 TRIM34Q9BYJ4 488 aa13.49□□□□□ -0.25
CLCC1-201ENST00000302500 HELLSQ9NRZ9 838 aa13.49□□□□□ -0.25
CLCC1-201ENST00000302500 LAMA3Q16787 3333 aa13.49□□□□□ -0.25
CLCC1-201ENST00000302500 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms