RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 METTL13Q8N6R0 699 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 SH3TC1Q8TE82 1336 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 GOLGA8HP0CJ92 632 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 SLC9C1Q4G0N8 1177 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 IFT20Q8IY31 132 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 ARFGAP2Q8N6H7 521 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 DESI2Q9BSY9 194 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 VPS37BQ9H9H4 285 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 EXOC7Q9UPT5 735 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 A2MP01023 1474 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 EAPPQ56P03 285 aaPredicted RBP15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 SPOUT1Q5T280 376 aaKnown RBP15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 CSRNP2Q9H175 543 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 TECP42680 631 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 TRIM14Q14142 442 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 HHATQ5VTY9 493 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 RSRC1Q96IZ7 334 aaKnown RBP15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 AFG3L2Q9Y4W6 797 aa15.06■□□□□ 0
CHRFAM7A-201ENST00000299847 ACTN4O43707 911 aaKnown RBP15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 TUBB4AP04350 444 aa15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 PTPN21Q16825 1174 aa15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 NBPF14Q5TI25 921 aa15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 SFMBT2Q5VUG0 894 aa15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 U2AF1L4Q8WU68 220 aaKnown RBP15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 TXNDC9O14530 226 aa15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 TNNI1P19237 187 aa15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 MAGEA1P43355 309 aa15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 TBC1D10BQ4KMP7 808 aaPredicted RBP15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 SDCCAG8Q86SQ7 713 aaPredicted RBP15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 RNF169Q8NCN4 708 aa15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 PPFIBP2Q8ND30 876 aa15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 SDR42E1Q8WUS8 393 aa15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 STK38LQ9Y2H1 464 aa15.05■□□□□ 0
CHRFAM7A-201ENST00000299847 TBC1D31Q96DN5 1066 aa15.05■□□□□ -0
CHRFAM7A-201ENST00000299847 SND1Q7KZF4 910 aaKnown RBP eCLIP15.05■□□□□ -0
CHRFAM7A-201ENST00000299847 CHAMP1Q96JM3 812 aa15.05■□□□□ -0
CHRFAM7A-201ENST00000299847 PAGR1Q9BTK6 254 aa15.05■□□□□ -0
CHRFAM7A-201ENST00000299847 TRPM2O94759 1503 aa15.05■□□□□ -0
CHRFAM7A-201ENST00000299847 ME3Q16798 604 aa15.05■□□□□ -0
CHRFAM7A-201ENST00000299847 LONRF2Q1L5Z9 754 aa15.05■□□□□ -0
CHRFAM7A-201ENST00000299847 CCDC170Q8IYT3 715 aa15.05■□□□□ -0
CHRFAM7A-201ENST00000299847 AZI2Q9H6S1 392 aa15.05■□□□□ -0
CHRFAM7A-201ENST00000299847 SLC52A2Q9HAB3 445 aa15.05■□□□□ -0
CHRFAM7A-201ENST00000299847 MKRN1Q9UHC7 482 aaKnown RBP15.05■□□□□ -0
CHRFAM7A-201ENST00000299847 LMTK3Q96Q04 1460 aa15.05■□□□□ -0
CHRFAM7A-201ENST00000299847 GOLGA6BA6NDN3 693 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 SGSM2O43147 1006 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 ZBED4O75132 1171 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 ABL1P00519 1130 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 C2CD5Q86YS7 1000 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 DNAJC10Q8IXB1 793 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 GPKOWQ92917 476 aaPredicted RBP eCLIP15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 ST7Q9NRC1 585 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 KRT15P19012 456 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 OAS2P29728 719 aaKnown RBP15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 IL13P35225 146 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 SCNN1DP51172 638 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 UHMK1Q8TAS1 419 aaKnown RBP15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 SEPT10Q9P0V9 454 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 TESPA1A2RU30 521 aaPredicted RBP15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 STK10O94804 968 aaKnown RBP15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 VPS41P49754 854 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 ZNF827Q17R98 1081 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 PEX26Q7Z412 305 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 LRRC47Q8N1G4 583 aaKnown RBP15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 CSPG5O95196 566 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 SCYL2Q6P3W7 929 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 TRIM35Q9UPQ4 493 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 IVNS1ABPQ9Y6Y0 642 aa15.04■□□□□ -0
CHRFAM7A-201ENST00000299847 KCNQ3O43525 872 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 CCDC89Q8N998 374 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 MED10Q9BTT4 135 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 SMCO2A6NFE2 343 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 PPARAQ07869 468 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 XPO4Q9C0E2 1151 aaKnown RBP15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 TCP10L2B9ZVM9 353 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 GTF2IP78347 998 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 SATB1Q01826 763 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 DOK7Q18PE1 504 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 ATL3Q6DD88 541 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 LPIN2Q92539 896 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 MCUR1Q96AQ8 359 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 C19orf44Q9H6X5 657 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 USP40Q9NVE5 1235 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 ASXL2Q76L83 1435 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 PTH1RQ03431 593 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 SESTD1Q86VW0 696 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 EEF2KMTQ96G04 330 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 RASSF4Q9H2L5 321 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 H0YIN7 160 aa15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 PNMA8AQ86V59 439 aaPredicted RBP15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 LLPHQ9BRT6 129 aaKnown RBP15.03■□□□□ -0
CHRFAM7A-201ENST00000299847 ZFYVE9O95405 1425 aa15.02■□□□□ -0
CHRFAM7A-201ENST00000299847 TRAPPC8Q9Y2L5 1435 aa15.02■□□□□ -0
CHRFAM7A-201ENST00000299847 KBTBD3Q8NAB2 608 aa15.02■□□□□ -0
CHRFAM7A-201ENST00000299847 CCDC87Q9NVE4 849 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms