RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 CCDC113Q9H0I3 377 aa20.52■□□□□ 0.88
SIM2-201ENST00000290399 ZC3H13Q5T200 1668 aaKnown RBP20.52■□□□□ 0.88
SIM2-201ENST00000290399 ADCY7P51828 1080 aa20.52■□□□□ 0.88
SIM2-201ENST00000290399 TERF1P54274 439 aa20.52■□□□□ 0.88
SIM2-201ENST00000290399 ADKP55263 362 aaKnown RBP20.52■□□□□ 0.88
SIM2-201ENST00000290399 SCLT1Q96NL6 688 aa20.52■□□□□ 0.88
SIM2-201ENST00000290399 TTF2Q9UNY4 1162 aaKnown RBP20.52■□□□□ 0.88
SIM2-201ENST00000290399 KRT13P13646 458 aa20.52■□□□□ 0.87
SIM2-201ENST00000290399 CARD6Q9BX69 1037 aa20.52■□□□□ 0.87
SIM2-201ENST00000290399 PYCARDQ9ULZ3 195 aa20.52■□□□□ 0.87
SIM2-201ENST00000290399 KLRF2D3W0D1 207 aa20.51■□□□□ 0.87
SIM2-201ENST00000290399 IGSF3O75054 1194 aa20.51■□□□□ 0.87
SIM2-201ENST00000290399 PTGDRQ13258 359 aa20.51■□□□□ 0.87
SIM2-201ENST00000290399 IFI16Q16666 785 aaKnown RBP20.51■□□□□ 0.87
SIM2-201ENST00000290399 INF2Q27J81 1249 aa20.51■□□□□ 0.87
SIM2-201ENST00000290399 CTNNBL1Q8WYA6 563 aaPredicted RBP20.51■□□□□ 0.87
SIM2-201ENST00000290399 PKNOX2Q96KN3 472 aa20.51■□□□□ 0.87
SIM2-201ENST00000290399 CCDC94Q9BW85 323 aaPredicted RBP20.51■□□□□ 0.87
SIM2-201ENST00000290399 ATP8A2Q9NTI2 1148 aa20.51■□□□□ 0.87
SIM2-201ENST00000290399 BCCIPQ9P287 314 aaKnown RBP eCLIP20.51■□□□□ 0.87
SIM2-201ENST00000290399 SH2B2O14492 632 aaPredicted RBP20.51■□□□□ 0.87
SIM2-201ENST00000290399 PPP1R2P41236 205 aa20.51■□□□□ 0.87
SIM2-201ENST00000290399 C11orf57Q6ZUT1 292 aaPredicted RBP20.51■□□□□ 0.87
SIM2-201ENST00000290399 NR5A1Q13285 461 aa20.51■□□□□ 0.87
SIM2-201ENST00000290399 CABP7Q86V35 215 aa20.51■□□□□ 0.87
SIM2-201ENST00000290399 SEPT7Q16181 437 aaKnown RBP20.5■□□□□ 0.87
SIM2-201ENST00000290399 NELFBQ8WX92 580 aa20.5■□□□□ 0.87
SIM2-201ENST00000290399 STRBPQ96SI9 672 aaKnown RBP20.5■□□□□ 0.87
SIM2-201ENST00000290399 CCDC172P0C7W6 258 aa20.5■□□□□ 0.87
SIM2-201ENST00000290399 TMEM87AQ8NBN3 555 aa20.5■□□□□ 0.87
SIM2-201ENST00000290399 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
SIM2-201ENST00000290399 BICD1Q96G01 975 aa20.5■□□□□ 0.87
SIM2-201ENST00000290399 TRERF1Q96PN7 1200 aa20.5■□□□□ 0.87
SIM2-201ENST00000290399 TBC1D5Q92609 795 aa20.5■□□□□ 0.87
SIM2-201ENST00000290399 CYP2D7A0A087X1C5 515 aa20.5■□□□□ 0.87
SIM2-201ENST00000290399 CYP2E1P05181 493 aaPredicted RBP20.5■□□□□ 0.87
SIM2-201ENST00000290399 IFNAR1P17181 557 aa20.5■□□□□ 0.87
SIM2-201ENST00000290399 LRRC8AQ8IWT6 810 aa20.5■□□□□ 0.87
SIM2-201ENST00000290399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.5■□□□□ 0.87
SIM2-201ENST00000290399 CALCRLQ16602 461 aa20.49■□□□□ 0.87
SIM2-201ENST00000290399 RNF26Q9BY78 433 aaPredicted RBP20.49■□□□□ 0.87
SIM2-201ENST00000290399 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.49■□□□□ 0.87
SIM2-201ENST00000290399 USP40Q9NVE5 1235 aa20.49■□□□□ 0.87
SIM2-201ENST00000290399 BIN2Q9UBW5 565 aaPredicted RBP20.49■□□□□ 0.87
SIM2-201ENST00000290399 ZBTB21Q9ULJ3 1066 aa20.49■□□□□ 0.87
SIM2-201ENST00000290399 GSTTP1A0A1W2PQM5 241 aa20.49■□□□□ 0.87
SIM2-201ENST00000290399 RAD51AP2Q09MP3 1159 aa20.49■□□□□ 0.87
SIM2-201ENST00000290399 PLS1Q14651 629 aa20.49■□□□□ 0.87
SIM2-201ENST00000290399 ELF2Q15723 593 aa20.49■□□□□ 0.87
SIM2-201ENST00000290399 ZYXQ15942 572 aaKnown RBP20.49■□□□□ 0.87
SIM2-201ENST00000290399 DCAF17Q5H9S7 520 aaPredicted RBP20.49■□□□□ 0.87
SIM2-201ENST00000290399 CLEC17AQ6ZS10 378 aa20.49■□□□□ 0.87
SIM2-201ENST00000290399 JDP2Q8WYK2 163 aa20.49■□□□□ 0.87
SIM2-201ENST00000290399 AGLP35573 1532 aa20.49■□□□□ 0.87
SIM2-201ENST00000290399 U2AF2P26368 475 aaKnown RBP eCLIP20.48■□□□□ 0.87
SIM2-201ENST00000290399 TRIM14Q14142 442 aa20.48■□□□□ 0.87
SIM2-201ENST00000290399 HERC4Q5GLZ8 1057 aaPredicted RBP20.48■□□□□ 0.87
SIM2-201ENST00000290399 SHTN1A0MZ66 631 aa20.48■□□□□ 0.87
SIM2-201ENST00000290399 PPP2R3AQ06190 1150 aa20.48■□□□□ 0.87
SIM2-201ENST00000290399 NAP1L4Q99733 375 aaKnown RBP20.48■□□□□ 0.87
SIM2-201ENST00000290399 ISCA1Q9BUE6 129 aa20.48■□□□□ 0.87
SIM2-201ENST00000290399 PKD2L1Q9P0L9 805 aa20.48■□□□□ 0.87
SIM2-201ENST00000290399 FMNL1O95466 1100 aaPredicted RBP20.48■□□□□ 0.87
SIM2-201ENST00000290399 GPIHBP1Q8IV16 184 aa20.48■□□□□ 0.87
SIM2-201ENST00000290399 PCP11498 1178 aaKnown RBP20.47■□□□□ 0.87
SIM2-201ENST00000290399 BTDP43251 543 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 FOXO4P98177 505 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 CYP26C1Q6V0L0 522 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 FAM196AQ6ZSG2 479 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 MAATS1Q7Z4T9 603 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 FOXP1Q9H334 677 aaPredicted RBP20.47■□□□□ 0.87
SIM2-201ENST00000290399 DDAH1O94760 285 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 LIFRP42702 1097 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 IL25Q9H293 177 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 CHMP2AO43633 222 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 CHGBP05060 677 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 RABL6Q3YEC7 729 aaPredicted RBP20.47■□□□□ 0.87
SIM2-201ENST00000290399 LONRF3Q496Y0 759 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 TMTC1Q8IUR5 882 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 PPP6R2O75170 966 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 ATP2B4P23634 1241 aa20.47■□□□□ 0.87
SIM2-201ENST00000290399 RAPGEF1Q13905 1077 aa20.46■□□□□ 0.87
SIM2-201ENST00000290399 SYMPKQ92797 1274 aaKnown RBP20.46■□□□□ 0.87
SIM2-201ENST00000290399 CSRNP2Q9H175 543 aa20.46■□□□□ 0.87
SIM2-201ENST00000290399 SRP68Q9UHB9 627 aaKnown RBP20.46■□□□□ 0.87
SIM2-201ENST00000290399 TNS3Q68CZ2 1445 aa20.46■□□□□ 0.87
SIM2-201ENST00000290399 SEMA3EO15041 775 aa20.46■□□□□ 0.87
SIM2-201ENST00000290399 PHACTR2O75167 634 aa20.46■□□□□ 0.87
SIM2-201ENST00000290399 RPL13P26373 211 aaKnown RBP20.46■□□□□ 0.87
SIM2-201ENST00000290399 SCNN1DP51172 638 aa20.46■□□□□ 0.87
SIM2-201ENST00000290399 SCARF1Q14162 830 aa20.46■□□□□ 0.87
SIM2-201ENST00000290399 USH1GQ495M9 461 aa20.46■□□□□ 0.87
SIM2-201ENST00000290399 SLF1Q9BQI6 1058 aa20.46■□□□□ 0.87
SIM2-201ENST00000290399 H0YIN7 160 aa20.45■□□□□ 0.87
SIM2-201ENST00000290399 IBSPP21815 317 aaPredicted RBP20.45■□□□□ 0.87
SIM2-201ENST00000290399 HAUS3Q68CZ6 603 aa20.45■□□□□ 0.87
SIM2-201ENST00000290399 LRRC47Q8N1G4 583 aaKnown RBP20.45■□□□□ 0.87
SIM2-201ENST00000290399 CACTINQ8WUQ7 758 aaKnown RBP20.45■□□□□ 0.87
SIM2-201ENST00000290399 INCENPQ9NQS7 918 aa20.45■□□□□ 0.87
SIM2-201ENST00000290399 TBC1D7Q9P0N9 293 aa20.45■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms