RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PTPAQ15257 358 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 SHC4Q6S5L8 630 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 PDILTQ8N807 584 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 PNMA1Q8ND90 353 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 MAP3K14Q99558 947 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 TTF2Q9UNY4 1162 aaKnown RBP20.67■□□□□ 0.9
CAPN1-201ENST00000279247 MYH6P13533 1939 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 SLURP2P0DP57 97 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 SYKP43405 635 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 FLAD1Q8NFF5 587 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 GPKOWQ92917 476 aaPredicted RBP eCLIP20.67■□□□□ 0.9
CAPN1-201ENST00000279247 MTA3Q9BTC8 594 aa20.67■□□□□ 0.9
CAPN1-201ENST00000279247 A0A1W2PQ27 194 aa20.66■□□□□ 0.9
CAPN1-201ENST00000279247 A0A1W2PQ64 194 aa20.66■□□□□ 0.9
CAPN1-201ENST00000279247 A0A1W2PQD8 194 aa20.66■□□□□ 0.9
CAPN1-201ENST00000279247 TMTC3Q6ZXV5 915 aa20.66■□□□□ 0.9
CAPN1-201ENST00000279247 PODXL2Q9NZ53 605 aa20.66■□□□□ 0.9
CAPN1-201ENST00000279247 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.66■□□□□ 0.9
CAPN1-201ENST00000279247 BECN2A8MW95 431 aa20.66■□□□□ 0.9
CAPN1-201ENST00000279247 XBP1P17861 261 aa20.66■□□□□ 0.9
CAPN1-201ENST00000279247 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.66■□□□□ 0.92e-6■□□□□ 9.3
CAPN1-201ENST00000279247 NPR1P16066 1061 aa20.65■□□□□ 0.9
CAPN1-201ENST00000279247 EIF6P56537 245 aaKnown RBP20.65■□□□□ 0.9
CAPN1-201ENST00000279247 C2CD5Q86YS7 1000 aa20.65■□□□□ 0.9
CAPN1-201ENST00000279247 JMYQ8N9B5 988 aa20.65■□□□□ 0.9
CAPN1-201ENST00000279247 GOLGA6L19H0YKK7 550 aa20.65■□□□□ 0.9
CAPN1-201ENST00000279247 PCP11498 1178 aaKnown RBP20.65■□□□□ 0.9
CAPN1-201ENST00000279247 FUT2Q10981 343 aa20.65■□□□□ 0.9
CAPN1-201ENST00000279247 CERS5Q8N5B7 392 aa20.65■□□□□ 0.9
CAPN1-201ENST00000279247 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.65■□□□□ 0.9
CAPN1-201ENST00000279247 DAGLAQ9Y4D2 1042 aa20.65■□□□□ 0.9
CAPN1-201ENST00000279247 FLT1P17948 1338 aa20.65■□□□□ 0.9
CAPN1-201ENST00000279247 CTAGE5O15320 804 aa20.64■□□□□ 0.9
CAPN1-201ENST00000279247 STX1AQ16623 288 aa20.64■□□□□ 0.9
CAPN1-201ENST00000279247 C15orf52Q6ZUT6 534 aaKnown RBP20.64■□□□□ 0.9
CAPN1-201ENST00000279247 C17orf53Q8N3J3 647 aaPredicted RBP20.64■□□□□ 0.9
CAPN1-201ENST00000279247 RBM28Q9NW13 759 aaKnown RBP20.64■□□□□ 0.9
CAPN1-201ENST00000279247 ATF5Q9Y2D1 282 aaPredicted RBP20.64■□□□□ 0.9
CAPN1-201ENST00000279247 ADAMTS3O15072 1205 aa20.64■□□□□ 0.89
CAPN1-201ENST00000279247 CALM1P0DP23 149 aa20.64■□□□□ 0.89
CAPN1-201ENST00000279247 CALM2P0DP24 149 aa20.64■□□□□ 0.89
CAPN1-201ENST00000279247 CALM3P0DP25 149 aa20.64■□□□□ 0.89
CAPN1-201ENST00000279247 CMA1P23946 247 aa20.64■□□□□ 0.89
CAPN1-201ENST00000279247 PPP1R1BQ9UD71 204 aaPredicted RBP20.64■□□□□ 0.89
CAPN1-201ENST00000279247 NOL7Q9UMY1 257 aaKnown RBP20.64■□□□□ 0.89
CAPN1-201ENST00000279247 GPR75-ASB3A0A0A6YYF3 556 aa20.64■□□□□ 0.89
CAPN1-201ENST00000279247 DDAH1O94760 285 aa20.64■□□□□ 0.89
CAPN1-201ENST00000279247 NLRP5P59047 1200 aa20.64■□□□□ 0.89
CAPN1-201ENST00000279247 PPP4CP60510 307 aa20.64■□□□□ 0.89
CAPN1-201ENST00000279247 CLEC10AQ8IUN9 316 aa20.64■□□□□ 0.89
CAPN1-201ENST00000279247 EYA3Q99504 573 aa20.64■□□□□ 0.89
CAPN1-201ENST00000279247 CNTNAP5Q8WYK1 1306 aa20.63■□□□□ 0.89
CAPN1-201ENST00000279247 WNT7AO00755 349 aa20.63■□□□□ 0.89
CAPN1-201ENST00000279247 PRPF3O43395 683 aaKnown RBP20.63■□□□□ 0.89
CAPN1-201ENST00000279247 PDE6BP35913 854 aa20.63■□□□□ 0.89
CAPN1-201ENST00000279247 CDK8P49336 464 aa20.63■□□□□ 0.89
CAPN1-201ENST00000279247 CACNB3P54284 484 aa20.63■□□□□ 0.89
CAPN1-201ENST00000279247 FOXP1Q9H334 677 aaPredicted RBP20.63■□□□□ 0.89
CAPN1-201ENST00000279247 ZKSCAN5Q9Y2L8 839 aa20.63■□□□□ 0.89
CAPN1-201ENST00000279247 KLRG2A4D1S0 409 aaPredicted RBP20.63■□□□□ 0.89
CAPN1-201ENST00000279247 KRT2P35908 639 aa20.63■□□□□ 0.89
CAPN1-201ENST00000279247 RHBDL3P58872 404 aa20.63■□□□□ 0.89
CAPN1-201ENST00000279247 DPCR1Q3MIW9 517 aa20.63■□□□□ 0.89
CAPN1-201ENST00000279247 RASA1P20936 1047 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 PNOCQ13519 176 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 ZNF174Q15697 407 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 KIAA0825Q8IV33 1275 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 AOPEPQ8N6M6 819 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 TBC1D22AQ8WUA7 517 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 NAP1L5Q96NT1 182 aaPredicted RBP20.62■□□□□ 0.89
CAPN1-201ENST00000279247 VAT1LQ9HCJ6 419 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 PCDHAC2Q9Y5I4 1007 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 ALDH1B1P30837 517 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 RBM5P52756 815 aaKnown RBP eCLIP20.62■□□□□ 0.89
CAPN1-201ENST00000279247 USP49Q70CQ1 688 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 HOMER1Q86YM7 354 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 KRI1Q8N9T8 703 aaKnown RBP20.62■□□□□ 0.89
CAPN1-201ENST00000279247 RASGRP4Q8TDF6 673 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 MASTLQ96GX5 879 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 FOXN1O15353 648 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 KLHL34Q8N239 644 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 KIAA1468Q9P260 1216 aa20.62■□□□□ 0.89
CAPN1-201ENST00000279247 NID2Q14112 1375 aa20.61■□□□□ 0.89
CAPN1-201ENST00000279247 RCAN1P53805 252 aa20.61■□□□□ 0.89
CAPN1-201ENST00000279247 RILPL1Q5EBL4 403 aa20.61■□□□□ 0.89
CAPN1-201ENST00000279247 PIK3AP1Q6ZUJ8 805 aa20.61■□□□□ 0.89
CAPN1-201ENST00000279247 COA1Q9GZY4 146 aa20.61■□□□□ 0.89
CAPN1-201ENST00000279247 ANO10Q9NW15 660 aa20.61■□□□□ 0.89
CAPN1-201ENST00000279247 LONRF3Q496Y0 759 aa20.61■□□□□ 0.89
CAPN1-201ENST00000279247 TMEM47Q9BQJ4 181 aa20.61■□□□□ 0.89
CAPN1-201ENST00000279247 RAD21O60216 631 aa20.6■□□□□ 0.89
CAPN1-201ENST00000279247 PPP6R2O75170 966 aa20.6■□□□□ 0.89
CAPN1-201ENST00000279247 SCG2P13521 617 aa20.6■□□□□ 0.89
CAPN1-201ENST00000279247 PPP2R5BQ15173 497 aa20.6■□□□□ 0.89
CAPN1-201ENST00000279247 PHF20Q9BVI0 1012 aa20.6■□□□□ 0.89
CAPN1-201ENST00000279247 KCNH3Q9ULD8 1083 aa20.6■□□□□ 0.89
CAPN1-201ENST00000279247 ANKRD31Q8N7Z5 1873 aa20.6■□□□□ 0.89
CAPN1-201ENST00000279247 KIF5BP33176 963 aa20.6■□□□□ 0.89
CAPN1-201ENST00000279247 ATP2B2Q01814 1243 aa20.6■□□□□ 0.89
CAPN1-201ENST00000279247 TCP10Q12799 353 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms