RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 NEDD1Q8NHV4 660 aa19.49■□□□□ 0.71
SNRPF-201ENST00000266735 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.49■□□□□ 0.71
SNRPF-201ENST00000266735 KRT23Q9C075 422 aa19.49■□□□□ 0.71
SNRPF-201ENST00000266735 TRIM75PA6NK02 468 aa19.48■□□□□ 0.71
SNRPF-201ENST00000266735 SREBF2Q12772 1141 aa19.48■□□□□ 0.71
SNRPF-201ENST00000266735 TRDNQ13061 729 aa19.48■□□□□ 0.71
SNRPF-201ENST00000266735 MS4A4AQ96JQ5 239 aa19.48■□□□□ 0.71
SNRPF-201ENST00000266735 IGKV6D-41A0A0C4DH26 115 aa19.47■□□□□ 0.71
SNRPF-201ENST00000266735 TESPA1A2RU30 521 aaPredicted RBP19.47■□□□□ 0.71
SNRPF-201ENST00000266735 CETPP11597 493 aa19.47■□□□□ 0.71
SNRPF-201ENST00000266735 C8orf34Q49A92 452 aa19.47■□□□□ 0.71
SNRPF-201ENST00000266735 PPP4R3BQ5MIZ7 849 aa19.47■□□□□ 0.71
SNRPF-201ENST00000266735 ZIC5Q96T25 663 aa19.47■□□□□ 0.71
SNRPF-201ENST00000266735 DOCK1Q14185 1865 aa19.46■□□□□ 0.71
SNRPF-201ENST00000266735 A0A0G2JLL6 359 aaPredicted RBP19.46■□□□□ 0.71
SNRPF-201ENST00000266735 USP17L10C9JJH3 530 aa19.46■□□□□ 0.71
SNRPF-201ENST00000266735 E7EWF7 191 aa19.46■□□□□ 0.71
SNRPF-201ENST00000266735 ZKSCAN1P17029 563 aaPredicted RBP19.46■□□□□ 0.71
SNRPF-201ENST00000266735 HSPA4P34932 840 aa19.46■□□□□ 0.71
SNRPF-201ENST00000266735 PRRT2Q7Z6L0 340 aaPredicted RBP19.46■□□□□ 0.71
SNRPF-201ENST00000266735 FEZ1Q99689 392 aa19.46■□□□□ 0.71
SNRPF-201ENST00000266735 SH2D4AQ9H788 454 aa19.46■□□□□ 0.71
SNRPF-201ENST00000266735 ARHGEF10LQ9HCE6 1279 aa19.46■□□□□ 0.71
SNRPF-201ENST00000266735 CCL15-CCL14A0A0B4J2E2 113 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 B4E1Z4 1266 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 C19orf81C9J6K1 198 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 TM4SF4P48230 202 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 BACE1P56817 501 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 MTMR2Q13614 643 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 CCL15Q16663 113 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 SH3D19Q5HYK7 790 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 FASTKD5Q7L8L6 764 aaKnown RBP19.45■□□□□ 0.7
SNRPF-201ENST00000266735 RALYLQ86SE5 291 aaKnown RBP19.45■□□□□ 0.7
SNRPF-201ENST00000266735 NCOA7Q8NI08 942 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 CEP95Q96GE4 821 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 USP26Q9BXU7 913 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 KIAA1683Q9H0B3 1180 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 TCP11L1Q9NUJ3 509 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 MTMR4Q9NYA4 1195 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 NYAP2Q9P242 653 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 TAF6LQ9Y6J9 622 aa19.45■□□□□ 0.7
SNRPF-201ENST00000266735 KDM4AO75164 1064 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 EEF2P13639 858 aaKnown RBP19.44■□□□□ 0.7
SNRPF-201ENST00000266735 MCCP23508 829 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 USP14P54578 494 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 TSGA10IPQ3SY00 556 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 STOX1Q6ZVD7 989 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 IQCA1Q86XH1 822 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 CLEC10AQ8IUN9 316 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 SIAH1Q8IUQ4 282 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 ACER1Q8TDN7 264 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 BRI3BPQ8WY22 251 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 TTLL1O95922 423 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 KRT32Q14532 448 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 USP17L2Q6R6M4 530 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 KCNB2Q92953 911 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 IL17RBQ9NRM6 502 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 TMOD4Q9NZQ9 345 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 SYNPO2Q9UMS6 1093 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 TMX2Q9Y320 296 aa19.44■□□□□ 0.7
SNRPF-201ENST00000266735 A0A1W2PRG0 241 aa19.43■□□□□ 0.7
SNRPF-201ENST00000266735 NOVP48745 357 aa19.43■□□□□ 0.7
SNRPF-201ENST00000266735 HMGCS2P54868 508 aa19.43■□□□□ 0.7
SNRPF-201ENST00000266735 ATP2B2Q01814 1243 aa19.43■□□□□ 0.7
SNRPF-201ENST00000266735 MAP2K1Q02750 393 aaPredicted RBP19.43■□□□□ 0.7
SNRPF-201ENST00000266735 CCDC178Q5BJE1 867 aa19.43■□□□□ 0.7
SNRPF-201ENST00000266735 OTUD7BQ6GQQ9 843 aa19.43■□□□□ 0.7
SNRPF-201ENST00000266735 JMYQ8N9B5 988 aa19.43■□□□□ 0.7
SNRPF-201ENST00000266735 PROCA1Q8NCQ7 364 aaPredicted RBP19.43■□□□□ 0.7
SNRPF-201ENST00000266735 C12orf42Q96LP6 360 aa19.43■□□□□ 0.7
SNRPF-201ENST00000266735 RNF39Q9H2S5 420 aa19.43■□□□□ 0.7
SNRPF-201ENST00000266735 ZSWIM5Q9P217 1185 aa19.43■□□□□ 0.7
SNRPF-201ENST00000266735 STX8Q9UNK0 236 aa19.43■□□□□ 0.7
SNRPF-201ENST00000266735 THSD7BQ9C0I4 1608 aa19.43■□□□□ 0.7
SNRPF-201ENST00000266735 LAMA4Q16363 1823 aa19.42■□□□□ 0.7
SNRPF-201ENST00000266735 NMT2O60551 498 aa19.42■□□□□ 0.7
SNRPF-201ENST00000266735 MOGSQ13724 837 aa19.42■□□□□ 0.7
SNRPF-201ENST00000266735 IFNL1Q8IU54 200 aa19.42■□□□□ 0.7
SNRPF-201ENST00000266735 RASEFQ8IZ41 740 aa19.42■□□□□ 0.7
SNRPF-201ENST00000266735 NKX2-3Q8TAU0 364 aa19.42■□□□□ 0.7
SNRPF-201ENST00000266735 MKL1Q969V6 931 aa19.42■□□□□ 0.7
SNRPF-201ENST00000266735 PTPN18Q99952 460 aa19.42■□□□□ 0.7
SNRPF-201ENST00000266735 CLIP2Q9UDT6 1046 aa19.42■□□□□ 0.7
SNRPF-201ENST00000266735 ALDH1A1P00352 501 aa19.41■□□□□ 0.7
SNRPF-201ENST00000266735 ZYXQ15942 572 aaKnown RBP19.41■□□□□ 0.7
SNRPF-201ENST00000266735 GADL1Q6ZQY3 521 aa19.41■□□□□ 0.7
SNRPF-201ENST00000266735 ANKRD23Q86SG2 305 aa19.41■□□□□ 0.7
SNRPF-201ENST00000266735 MB21D2Q8IYB1 491 aaPredicted RBP19.41■□□□□ 0.7
SNRPF-201ENST00000266735 LPAR1Q92633 364 aa19.41■□□□□ 0.7
SNRPF-201ENST00000266735 TTC14Q96N46 770 aa19.41■□□□□ 0.7
SNRPF-201ENST00000266735 NEK1Q96PY6 1258 aa19.41■□□□□ 0.7
SNRPF-201ENST00000266735 ZSCAN10Q96SZ4 725 aaPredicted RBP19.41■□□□□ 0.7
SNRPF-201ENST00000266735 UBAC1Q9BSL1 405 aa19.41■□□□□ 0.7
SNRPF-201ENST00000266735 VCPKMTQ9H867 229 aa19.41■□□□□ 0.7
SNRPF-201ENST00000266735 ZCCHC17Q9NP64 241 aaKnown RBP19.41■□□□□ 0.7
SNRPF-201ENST00000266735 EMILIN3Q9NT22 766 aa19.41■□□□□ 0.7
SNRPF-201ENST00000266735 AGTPBP1Q9UPW5 1226 aa19.41■□□□□ 0.7
SNRPF-201ENST00000266735 BTBD19C9JJ37 291 aa19.4■□□□□ 0.7
SNRPF-201ENST00000266735 IGF2BP3O00425 579 aaKnown RBP eCLIP19.4■□□□□ 0.7
SNRPF-201ENST00000266735 SEC24BO95487 1268 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms