RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 FGRP09769 529 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 KCNJ6P48051 423 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 MDM2Q00987 491 aaPredicted RBP11.79□□□□□ -0.52
LSG1-201ENST00000265245 MECOMQ03112 1051 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 TROAPQ12815 778 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 SYCP1Q15431 976 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 VPS72Q15906 364 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 FANCLQ9NW38 375 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 NARFQ9UHQ1 456 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 SERTAD1Q9UHV2 236 aa11.79□□□□□ -0.52
LSG1-201ENST00000265245 CHD4Q14839 1912 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 BCORQ6W2J9 1755 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 FOXN1O15353 648 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 TPTE2Q6XPS3 522 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 TRIML1Q8N9V2 468 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 ZNF384Q8TF68 577 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 PHF20Q9BVI0 1012 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 AATFQ9NY61 560 aaKnown RBP eCLIP11.78□□□□□ -0.52
LSG1-201ENST00000265245 MAN1B1Q9UKM7 699 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 PSDA5PKW4 1024 aaPredicted RBP11.78□□□□□ -0.52
LSG1-201ENST00000265245 NPHP1O15259 732 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 PLEKHA8P1O95397 391 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 PKN1Q16512 942 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 TMED8Q6PL24 325 aaPredicted RBP11.78□□□□□ -0.52
LSG1-201ENST00000265245 ANKRD7Q92527 254 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 CSRNP2Q9H175 543 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 ATP8A2Q9NTI2 1148 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 TFCP2L1Q9NZI6 479 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 ORC4O43929 436 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
LSG1-201ENST00000265245 TOP1P11387 765 aaKnown RBP11.78□□□□□ -0.52
LSG1-201ENST00000265245 KLRK1P26718 216 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 FUT2Q10981 343 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 NT5DC1Q5TFE4 455 aa11.78□□□□□ -0.52
LSG1-201ENST00000265245 DCP1AQ9NPI6 582 aaPredicted RBP11.78□□□□□ -0.52
LSG1-201ENST00000265245 ARPP21Q9UBL0 812 aaPredicted RBP11.78□□□□□ -0.52
LSG1-201ENST00000265245 MORC2Q9Y6X9 1032 aaPredicted RBP11.78□□□□□ -0.52
LSG1-201ENST00000265245 NHSQ6T4R5 1651 aa11.77□□□□□ -0.52
LSG1-201ENST00000265245 hCG_1642624A0A1W2PR95 340 aa11.77□□□□□ -0.52
LSG1-201ENST00000265245 CCP110O43303 1012 aa11.77□□□□□ -0.52
LSG1-201ENST00000265245 RPS6KA4O75676 772 aa11.77□□□□□ -0.52
LSG1-201ENST00000265245 PDE4BQ07343 736 aa11.77□□□□□ -0.52
LSG1-201ENST00000265245 RC3H1Q5TC82 1133 aaKnown RBP11.77□□□□□ -0.52
LSG1-201ENST00000265245 E4F1Q66K89 784 aaPredicted RBP11.77□□□□□ -0.52
LSG1-201ENST00000265245 TMTC3Q6ZXV5 915 aa11.77□□□□□ -0.52
LSG1-201ENST00000265245 COL4A1P02462 1669 aa11.77□□□□□ -0.53
LSG1-201ENST00000265245 MYCNP04198 464 aaPredicted RBP11.77□□□□□ -0.53
LSG1-201ENST00000265245 BMP6P22004 513 aa11.77□□□□□ -0.53
LSG1-201ENST00000265245 FERMT2Q96AC1 680 aa11.77□□□□□ -0.53
LSG1-201ENST00000265245 GNPATO15228 680 aa11.77□□□□□ -0.53
LSG1-201ENST00000265245 NCBP1Q09161 790 aaKnown RBP11.77□□□□□ -0.53
LSG1-201ENST00000265245 DZIP1Q86YF9 867 aaKnown RBP11.77□□□□□ -0.53
LSG1-201ENST00000265245 VSTM4Q8IW00 320 aa11.77□□□□□ -0.53
LSG1-201ENST00000265245 DPF2Q92785 391 aa11.77□□□□□ -0.53
LSG1-201ENST00000265245 SRP68Q9UHB9 627 aaKnown RBP11.77□□□□□ -0.53
LSG1-201ENST00000265245 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.77□□□□□ -0.53
LSG1-201ENST00000265245 ACTN4O43707 911 aaKnown RBP11.76□□□□□ -0.53
LSG1-201ENST00000265245 TUBB4AP04350 444 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 PRDX5P30044 214 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 SPTY2D1Q68D10 685 aaPredicted RBP11.76□□□□□ -0.53
LSG1-201ENST00000265245 SMIM5Q71RC9 77 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 PPP1R13BQ96KQ4 1090 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 DUOX1Q9NRD9 1551 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 NFE2L3Q9Y4A8 694 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 ECM29Q5VYK3 1845 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 TSPY2A6NKD2 308 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 SARSP49591 514 aaKnown RBP11.76□□□□□ -0.53
LSG1-201ENST00000265245 MORC3Q14149 939 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 ENOX1Q8TC92 643 aaKnown RBP11.76□□□□□ -0.53
LSG1-201ENST00000265245 FAM205CA6NFA0 338 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 EP400NLQ6ZTU2 488 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 USP49Q70CQ1 688 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 DHX58Q96C10 678 aa11.76□□□□□ -0.53
LSG1-201ENST00000265245 RTCBQ9Y3I0 505 aaKnown RBP11.76□□□□□ -0.53
LSG1-201ENST00000265245 CACNA1SQ13698 1873 aa11.75□□□□□ -0.53
LSG1-201ENST00000265245 KIF5BP33176 963 aa11.75□□□□□ -0.53
LSG1-201ENST00000265245 ZNF827Q17R98 1081 aa11.75□□□□□ -0.53
LSG1-201ENST00000265245 FAM47AQ5JRC9 791 aa11.75□□□□□ -0.53
LSG1-201ENST00000265245 GRAMD1CQ8IYS0 662 aa11.75□□□□□ -0.53
LSG1-201ENST00000265245 SHISA4Q96DD7 197 aa11.75□□□□□ -0.53
LSG1-201ENST00000265245 NGLY1Q96IV0 654 aa11.75□□□□□ -0.53
LSG1-201ENST00000265245 SBK1Q52WX2 424 aa11.75□□□□□ -0.53
LSG1-201ENST00000265245 TTC38Q5R3I4 469 aa11.75□□□□□ -0.53
LSG1-201ENST00000265245 HOMER1Q86YM7 354 aa11.75□□□□□ -0.53
LSG1-201ENST00000265245 MCM9Q9NXL9 1143 aa11.75□□□□□ -0.53
LSG1-201ENST00000265245 SLFN14P0C7P3 912 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 NLRP5P59047 1200 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 HSP90AA4PQ58FG1 418 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 EARS2Q5JPH6 523 aaKnown RBP11.74□□□□□ -0.53
LSG1-201ENST00000265245 CCDC24Q8N4L8 307 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 C8orf37Q96NL8 207 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 CNTNAP5Q8WYK1 1306 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 COL5A3P25940 1745 aaPredicted RBP11.74□□□□□ -0.53
LSG1-201ENST00000265245 NMT2O60551 498 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 SCG2P13521 617 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 ERCC5P28715 1186 aaPredicted RBP11.74□□□□□ -0.53
LSG1-201ENST00000265245 IRX3P78415 501 aaPredicted RBP11.74□□□□□ -0.53
LSG1-201ENST00000265245 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.74□□□□□ -0.53
LSG1-201ENST00000265245 SRBD1Q8N5C6 995 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms