RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 MICALL2Q8IY33 904 aa21.85■■□□□ 1.09
COL4A3BP-201ENST00000261415 GPC2Q8N158 579 aa21.85■■□□□ 1.09
COL4A3BP-201ENST00000261415 FBXL16Q8N461 479 aa21.85■■□□□ 1.09
COL4A3BP-201ENST00000261415 DYNLL2Q96FJ2 89 aa21.85■■□□□ 1.09
COL4A3BP-201ENST00000261415 ZBED3Q96IU2 234 aaPredicted RBP21.85■■□□□ 1.09
COL4A3BP-201ENST00000261415 LARGE1O95461 756 aa21.84■■□□□ 1.09
COL4A3BP-201ENST00000261415 ESR2Q92731 530 aa21.84■■□□□ 1.09
COL4A3BP-201ENST00000261415 TCP10Q12799 353 aa21.83■■□□□ 1.09
COL4A3BP-201ENST00000261415 C9orf131Q5VYM1 1079 aa21.83■■□□□ 1.09
COL4A3BP-201ENST00000261415 TMOD2Q9NZR1 351 aa21.83■■□□□ 1.09
COL4A3BP-201ENST00000261415 CNOT7Q9UIV1 285 aaKnown RBP21.83■■□□□ 1.09
COL4A3BP-201ENST00000261415 CLRN2A0PK11 232 aa21.83■■□□□ 1.09
COL4A3BP-201ENST00000261415 SPDYE2Q495Y8 402 aa21.83■■□□□ 1.09
COL4A3BP-201ENST00000261415 TTC6Q86TZ1 520 aa21.83■■□□□ 1.09
COL4A3BP-201ENST00000261415 ZFPM1Q8IX07 1006 aa21.83■■□□□ 1.09
COL4A3BP-201ENST00000261415 ZNF397Q8NF99 534 aaPredicted RBP21.83■■□□□ 1.09
COL4A3BP-201ENST00000261415 ZSCAN31Q96LW9 406 aaPredicted RBP21.83■■□□□ 1.09
COL4A3BP-201ENST00000261415 GPHNQ9NQX3 736 aaPredicted RBP21.83■■□□□ 1.09
COL4A3BP-201ENST00000261415 ZNF70Q9UC06 446 aaPredicted RBP21.83■■□□□ 1.09
COL4A3BP-201ENST00000261415 ERICH4A6NGS2 130 aa21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 WNT10BO00744 389 aa21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 RANBP6O60518 1105 aaKnown RBP21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 ME3Q16798 604 aa21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 COL2A1P02458 1487 aaPredicted RBP21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 CLGNO14967 610 aa21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 EGFRP00533 1210 aa21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 CUL4AQ13619 759 aa21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 C16orf86Q6ZW13 317 aa21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 SLC44A5Q8NCS7 719 aa21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 TMEM87BQ96K49 555 aa21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 SH2B1Q9NRF2 756 aaPredicted RBP21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 POLR2AP24928 1970 aaKnown RBP21.82■■□□□ 1.08
COL4A3BP-201ENST00000261415 NBPF9Q3BBW0 867 aa21.81■■□□□ 1.08
COL4A3BP-201ENST00000261415 ANGEL1Q9UNK9 670 aaKnown RBP21.81■■□□□ 1.08
COL4A3BP-201ENST00000261415 SH2B2O14492 632 aaPredicted RBP21.81■■□□□ 1.08
COL4A3BP-201ENST00000261415 MYO1BO43795 1136 aa21.81■■□□□ 1.08
COL4A3BP-201ENST00000261415 GRIN3BO60391 1043 aa21.81■■□□□ 1.08
COL4A3BP-201ENST00000261415 ENTPD3O75355 529 aa21.81■■□□□ 1.08
COL4A3BP-201ENST00000261415 CYP2C19P33261 490 aa21.81■■□□□ 1.08
COL4A3BP-201ENST00000261415 APOBRQ0VD83 1088 aa21.81■■□□□ 1.08
COL4A3BP-201ENST00000261415 RNF216Q9NWF9 866 aaPredicted RBP21.81■■□□□ 1.08
COL4A3BP-201ENST00000261415 PYCARDQ9ULZ3 195 aa21.81■■□□□ 1.08
COL4A3BP-201ENST00000261415 SAMD7Q7Z3H4 446 aa21.8■■□□□ 1.08
COL4A3BP-201ENST00000261415 IGDCC4Q8TDY8 1250 aa21.8■■□□□ 1.08
COL4A3BP-201ENST00000261415 ZKSCAN3Q9BRR0 538 aa21.8■■□□□ 1.08
COL4A3BP-201ENST00000261415 DHX36Q9H2U1 1008 aaKnown RBP21.8■■□□□ 1.08
COL4A3BP-201ENST00000261415 MKNK2Q9HBH9 465 aa21.8■■□□□ 1.08
COL4A3BP-201ENST00000261415 ATRNL1Q5VV63 1379 aa21.8■■□□□ 1.08
COL4A3BP-201ENST00000261415 HLA-DOAP06340 250 aa21.8■■□□□ 1.08
COL4A3BP-201ENST00000261415 RBM26Q5T8P6 1007 aaKnown RBP21.8■■□□□ 1.08
COL4A3BP-201ENST00000261415 CCDC112Q8NEF3 446 aa21.8■■□□□ 1.08
COL4A3BP-201ENST00000261415 MTA3Q9BTC8 594 aa21.8■■□□□ 1.08
COL4A3BP-201ENST00000261415 ZNF287Q9HBT7 754 aa21.8■■□□□ 1.08
COL4A3BP-201ENST00000261415 GPRC5DQ9NZD1 345 aa21.8■■□□□ 1.08
COL4A3BP-201ENST00000261415 GREB1LQ9C091 1923 aaPredicted RBP21.79■■□□□ 1.08
COL4A3BP-201ENST00000261415 DDTLA6NHG4 134 aaPredicted RBP21.79■■□□□ 1.08
COL4A3BP-201ENST00000261415 TCP10L2B9ZVM9 353 aa21.79■■□□□ 1.08
COL4A3BP-201ENST00000261415 CDK8P49336 464 aa21.79■■□□□ 1.08
COL4A3BP-201ENST00000261415 GABPAQ06546 454 aa21.79■■□□□ 1.08
COL4A3BP-201ENST00000261415 TMEM67Q5HYA8 995 aa21.79■■□□□ 1.08
COL4A3BP-201ENST00000261415 AXDND1Q5T1B0 1012 aaPredicted RBP21.79■■□□□ 1.08
COL4A3BP-201ENST00000261415 SH3BP5LQ7L8J4 393 aa21.79■■□□□ 1.08
COL4A3BP-201ENST00000261415 VEZTQ9HBM0 779 aa21.79■■□□□ 1.08
COL4A3BP-201ENST00000261415 SERPINB13Q9UIV8 391 aa21.79■■□□□ 1.08
COL4A3BP-201ENST00000261415 IFIT3O14879 490 aaKnown RBP21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 BRD1O95696 1058 aa21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 NT5C2P49902 561 aa21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 EVCP57679 992 aa21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 SART3Q15020 963 aaKnown RBP21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 TBC1D10BQ4KMP7 808 aaPredicted RBP21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 FAM47AQ5JRC9 791 aa21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 CCDC183Q5T5S1 534 aa21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 ZSCAN29Q8IWY8 852 aaPredicted RBP21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 UBAC1Q9BSL1 405 aa21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 KCNF1Q9H3M0 494 aa21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 LY9Q9HBG7 655 aa21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 CNTNAP1P78357 1384 aa21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 DDNO94850 711 aaPredicted RBP21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 FKBP1CQ5VVH2 108 aa21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 EHD4Q9H223 541 aa21.78■■□□□ 1.08
COL4A3BP-201ENST00000261415 MYH4Q9Y623 1939 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 TSPY2A6NKD2 308 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 H7C1D1 291 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 RASA1P20936 1047 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 ST3GAL1Q11201 340 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 KIF4BQ2VIQ3 1234 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 IQCA1Q86XH1 822 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 NECAB1Q8N987 351 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 INTS4Q96HW7 963 aaKnown RBP21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 SENP2Q9HC62 589 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 TNKSO95271 1327 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 LIFRP42702 1097 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 HNRNPH2P55795 449 aaKnown RBP21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 STK3Q13188 491 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 CCDC83Q8IWF9 413 aa21.77■■□□□ 1.08
COL4A3BP-201ENST00000261415 ERICH2A1L162 156 aa21.76■■□□□ 1.07
COL4A3BP-201ENST00000261415 ZNF444Q8N0Y2 327 aaPredicted RBP21.76■■□□□ 1.07
COL4A3BP-201ENST00000261415 ZNF274Q96GC6 653 aaPredicted RBP21.76■■□□□ 1.07
COL4A3BP-201ENST00000261415 ZSCAN10Q96SZ4 725 aaPredicted RBP21.76■■□□□ 1.07
COL4A3BP-201ENST00000261415 PI4KBQ9UBF8 816 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms