RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 NCOA7Q8NI08 942 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 RPGRIP1Q96KN7 1286 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 CDCA7Q9BWT1 371 aaPredicted RBP4.73□□□□□ -1.65
UBE4A-201ENST00000252108 BTG4Q9NY30 223 aa4.73□□□□□ -1.65
UBE4A-201ENST00000252108 RLFQ13129 1914 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 SIP14410 1827 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 ACTN4O43707 911 aaKnown RBP4.72□□□□□ -1.65
UBE4A-201ENST00000252108 CCDC175P0C221 793 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 ARMCX5Q6P1M9 558 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 PTF1AQ7RTS3 328 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 SLC51AQ86UW1 340 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 LRRC2Q9BYS8 371 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 CEP126Q9P2H0 1117 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 ZNF532Q9HCE3 1301 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 PUM3Q15397 648 aaKnown RBP4.72□□□□□ -1.65
UBE4A-201ENST00000252108 TERF2Q15554 542 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 RC3H1Q5TC82 1133 aaKnown RBP4.72□□□□□ -1.65
UBE4A-201ENST00000252108 E4F1Q66K89 784 aaPredicted RBP4.72□□□□□ -1.65
UBE4A-201ENST00000252108 WWC2Q6AWC2 1192 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 MICALCLQ6ZW33 695 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 RASSF4Q9H2L5 321 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 SLC5A1P13866 664 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 CRKLP46109 303 aaKnown RBP4.72□□□□□ -1.65
UBE4A-201ENST00000252108 ATP2B3Q16720 1220 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 TTC39AQ5SRH9 613 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 TMTC2Q8N394 836 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 C17orf53Q8N3J3 647 aaPredicted RBP4.72□□□□□ -1.65
UBE4A-201ENST00000252108 MLKLQ8NB16 471 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 RABGGTAQ92696 567 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 IQCDQ96DY2 449 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 AIFM3Q96NN9 605 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 PHF20Q9BVI0 1012 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.72□□□□□ -1.65
UBE4A-201ENST00000252108 NACAP1Q9BZK3 213 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 ZSWIM5Q9P217 1185 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 USP27XA6NNY8 438 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 PATL2C9JE40 543 aaKnown RBP4.72□□□□□ -1.65
UBE4A-201ENST00000252108 CUTAO60888 179 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 CUL4BQ13620 913 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 IL17AQ16552 155 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 WASHC4Q2M389 1173 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 CRY2Q49AN0 593 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 TOM1L2Q6ZVM7 507 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 TRMT1Q9NXH9 659 aaKnown RBP4.72□□□□□ -1.65
UBE4A-201ENST00000252108 TMOD3Q9NYL9 352 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 KIAA1468Q9P260 1216 aa4.72□□□□□ -1.65
UBE4A-201ENST00000252108 ORC3Q9UBD5 711 aaPredicted RBP4.72□□□□□ -1.65
UBE4A-201ENST00000252108 ANGEL1Q9UNK9 670 aaKnown RBP4.72□□□□□ -1.65
UBE4A-201ENST00000252108 TTF2Q9UNY4 1162 aaKnown RBP4.72□□□□□ -1.65
UBE4A-201ENST00000252108 PRC1O43663 620 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 CAPN15O75808 1086 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 PPP1R2P41236 205 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 GRIN1Q05586 938 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 HSP90AB3PQ58FF7 597 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 IFNL3Q8IZI9 196 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 CNNM3Q8NE01 707 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 CERKQ8TCT0 537 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 TMEM87BQ96K49 555 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 NEUROD6Q96NK8 337 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 EFCC1Q9HA90 598 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 MYO1AQ9UBC5 1043 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 PHIPQ8WWQ0 1821 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 IRS4O14654 1257 aaPredicted RBP4.71□□□□□ -1.65
UBE4A-201ENST00000252108 PDE4BQ07343 736 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 PPP2R5BQ15173 497 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 DPCR1Q3MIW9 517 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 LCORLQ8N3X6 602 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 BRIP1Q9BX63 1249 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 INCENPQ9NQS7 918 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 MAGEC2Q9UBF1 373 aaPredicted RBP4.71□□□□□ -1.65
UBE4A-201ENST00000252108 MYO6Q9UM54 1294 aa4.71□□□□□ -1.65
UBE4A-201ENST00000252108 LCTP09848 1927 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 PTPREP23469 700 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 NOP2P46087 812 aaKnown RBP4.71□□□□□ -1.66
UBE4A-201ENST00000252108 GNG11P61952 73 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 CEBPZQ03701 1054 aaKnown RBP4.71□□□□□ -1.66
UBE4A-201ENST00000252108 LRMPQ12912 555 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 MORC3Q14149 939 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 CDKAL1Q5VV42 579 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 CNGA4Q8IV77 575 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 SPATA5Q8NB90 893 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 GOLGA5Q8TBA6 731 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 EXOC4Q96A65 974 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 RMND1Q9NWS8 449 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 CNTNAP5Q8WYK1 1306 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 SHTN1A0MZ66 631 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 LRRC10BA6NIK2 292 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 ORC4O43929 436 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 MMP1P03956 469 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 HOXA7P31268 230 aaPredicted RBP4.71□□□□□ -1.66
UBE4A-201ENST00000252108 SBK1Q52WX2 424 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 SYT10Q6XYQ8 523 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 CRACR2AQ9BSW2 395 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 RNF41Q9H4P4 317 aaPredicted RBP4.71□□□□□ -1.66
UBE4A-201ENST00000252108 CNNM2Q9H8M5 875 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 IFNKQ9P0W0 207 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 ZNF215Q9UL58 517 aaPredicted RBP4.71□□□□□ -1.66
UBE4A-201ENST00000252108 CTAGE15A4D2H0 777 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 STX10O60499 249 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 KIAA0754O94854 1291 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms