RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 BCL2L12Q9HB09 334 aa11.34□□□□□ -0.59
MDH1-201ENST00000233114 TACC3Q9Y6A5 838 aa11.34□□□□□ -0.59
MDH1-201ENST00000233114 MYH6P13533 1939 aa11.34□□□□□ -0.59
MDH1-201ENST00000233114 PRKAB2O43741 272 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 SMC2O95347 1197 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 PTPN14Q15678 1187 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 NT5DC1Q5TFE4 455 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 CEP135Q66GS9 1140 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 FILIP1Q7Z7B0 1213 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 CCAR2Q8N163 923 aaKnown RBP11.33□□□□□ -0.6
MDH1-201ENST00000233114 CNNM3Q8NE01 707 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 CCDC94Q9BW85 323 aaPredicted RBP11.33□□□□□ -0.6
MDH1-201ENST00000233114 XPO4Q9C0E2 1151 aaKnown RBP11.33□□□□□ -0.6
MDH1-201ENST00000233114 IFNKQ9P0W0 207 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 KIAA1551Q9HCM1 1747 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 LAMB1P07942 1786 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 DDAH1O94760 285 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 SFPQP23246 707 aaKnown RBP eCLIP11.33□□□□□ -0.6
MDH1-201ENST00000233114 FANCCQ00597 558 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 AKAP17AQ02040 695 aaKnown RBP11.33□□□□□ -0.6
MDH1-201ENST00000233114 RRP12Q5JTH9 1297 aaKnown RBP11.33□□□□□ -0.6
MDH1-201ENST00000233114 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
MDH1-201ENST00000233114 STK11IPQ8N1F8 1099 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 ERCC4Q92889 916 aaPredicted RBP11.33□□□□□ -0.6
MDH1-201ENST00000233114 RIOK1Q9BRS2 568 aaKnown RBP11.33□□□□□ -0.6
MDH1-201ENST00000233114 MYL10Q9BUA6 226 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 NYXQ9GZU5 481 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 RAI14Q9P0K7 980 aa11.33□□□□□ -0.6
MDH1-201ENST00000233114 FBXO2Q9UK22 296 aaPredicted RBP11.33□□□□□ -0.6
MDH1-201ENST00000233114 SRPRBQ9Y5M8 271 aaKnown RBP11.33□□□□□ -0.6
MDH1-201ENST00000233114 BTBD18B2RXH4 712 aa11.32□□□□□ -0.6
MDH1-201ENST00000233114 PRPF3O43395 683 aaKnown RBP11.32□□□□□ -0.6
MDH1-201ENST00000233114 ORC4O43929 436 aa11.32□□□□□ -0.6
MDH1-201ENST00000233114 LSM11P83369 360 aaKnown RBP eCLIP11.32□□□□□ -0.6
MDH1-201ENST00000233114 CATIPQ7Z7H3 387 aa11.32□□□□□ -0.6
MDH1-201ENST00000233114 METTL16Q86W50 562 aaKnown RBP11.32□□□□□ -0.6
MDH1-201ENST00000233114 FCHSD1Q86WN1 690 aa11.32□□□□□ -0.6
MDH1-201ENST00000233114 IQCA1Q86XH1 822 aa11.32□□□□□ -0.6
MDH1-201ENST00000233114 MLKLQ8NB16 471 aa11.32□□□□□ -0.6
MDH1-201ENST00000233114 TOMM22Q9NS69 142 aa11.32□□□□□ -0.6
MDH1-201ENST00000233114 COL1A1P02452 1464 aaPredicted RBP11.32□□□□□ -0.6
MDH1-201ENST00000233114 TNKSO95271 1327 aa11.32□□□□□ -0.6
MDH1-201ENST00000233114 MYH13Q9UKX3 1938 aa11.31□□□□□ -0.6
MDH1-201ENST00000233114 A0A087WWV3 80 aa11.31□□□□□ -0.6
MDH1-201ENST00000233114 BIN1O00499 593 aa11.31□□□□□ -0.6
MDH1-201ENST00000233114 TOB1P50616 345 aaPredicted RBP11.31□□□□□ -0.6
MDH1-201ENST00000233114 MDM2Q00987 491 aaPredicted RBP11.31□□□□□ -0.6
MDH1-201ENST00000233114 RC3H1Q5TC82 1133 aaKnown RBP11.31□□□□□ -0.6
MDH1-201ENST00000233114 TMC6Q7Z403 805 aa11.31□□□□□ -0.6
MDH1-201ENST00000233114 FBXO33Q7Z6M2 555 aa11.31□□□□□ -0.6
MDH1-201ENST00000233114 ZSCAN10Q96SZ4 725 aaPredicted RBP11.31□□□□□ -0.6
MDH1-201ENST00000233114 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
MDH1-201ENST00000233114 ANKRD2Q9GZV1 360 aa11.31□□□□□ -0.6
MDH1-201ENST00000233114 BRMS1Q9HCU9 246 aa11.31□□□□□ -0.6
MDH1-201ENST00000233114 INCENPQ9NQS7 918 aa11.31□□□□□ -0.6
MDH1-201ENST00000233114 AATFQ9NY61 560 aaKnown RBP eCLIP11.31□□□□□ -0.6
MDH1-201ENST00000233114 FAM177BA6PVY3 158 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 SNAP23O00161 211 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 GUCY1A2P33402 732 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 SARSP49591 514 aaKnown RBP11.3□□□□□ -0.6
MDH1-201ENST00000233114 PNOCQ13519 176 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 POSTNQ15063 836 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 LONRF3Q496Y0 759 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 MIGA1Q8NAN2 632 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 KIF18AQ8NI77 898 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 FERMT2Q96AC1 680 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 ACSBG1Q96GR2 724 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 CLIC6Q96NY7 704 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 PYM1Q9BRP8 204 aaKnown RBP11.3□□□□□ -0.6
MDH1-201ENST00000233114 PHF20Q9BVI0 1012 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 HSD3B7Q9H2F3 369 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 BCCIPQ9P287 314 aaKnown RBP eCLIP11.3□□□□□ -0.6
MDH1-201ENST00000233114 MINPP1Q9UNW1 487 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 TRIM75PA6NK02 468 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 KRT2P35908 639 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 UBASH3AP57075 661 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 FUT2Q10981 343 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 ARID5BQ14865 1188 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 ERFEQ4G0M1 354 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 SBK1Q52WX2 424 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 IFIT1BQ5T764 474 aaKnown RBP11.3□□□□□ -0.6
MDH1-201ENST00000233114 ARMCX5Q6P1M9 558 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 PDCL2Q8N4E4 241 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 ENAHQ8N8S7 591 aaPredicted RBP11.3□□□□□ -0.6
MDH1-201ENST00000233114 SPATA20Q8TB22 786 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 ENOX1Q8TC92 643 aaKnown RBP11.3□□□□□ -0.6
MDH1-201ENST00000233114 FBXW7Q969H0 707 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 ATP8A2Q9NTI2 1148 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 ABCF2Q9UG63 623 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.3□□□□□ -0.6
MDH1-201ENST00000233114 PCDHA5Q9Y5H7 936 aa11.3□□□□□ -0.6
MDH1-201ENST00000233114 LTBP4Q8N2S1 1624 aa11.29□□□□□ -0.6
MDH1-201ENST00000233114 COL4A1P02462 1669 aa11.29□□□□□ -0.6
MDH1-201ENST00000233114 CCDC88AQ3V6T2 1871 aa11.29□□□□□ -0.6
MDH1-201ENST00000233114 C2orf72A6NCS6 295 aa11.29□□□□□ -0.6
MDH1-201ENST00000233114 KIF3CO14782 793 aa11.29□□□□□ -0.6
MDH1-201ENST00000233114 ERCC5P28715 1186 aaPredicted RBP11.29□□□□□ -0.6
MDH1-201ENST00000233114 LMOD1P29536 600 aaPredicted RBP11.29□□□□□ -0.6
MDH1-201ENST00000233114 GYG1P46976 350 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms