RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Stag1Q9D3E6 1258 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Cfap53Q9D439 514 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Syce1Q9D495 329 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Sap30bpQ02614 308 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Cabp7Q91ZM8 215 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 4930407I10RikD3Z5T8 1512 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Apol7aB2RT54 418 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Slc38a10Q5I012 1090 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Pus7lQ8CE46 702 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Abcb6Q9DC29 842 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 DonsonQ9QXP4 560 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Gpaa1Q9WTK3 621 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ehbp1l1Q99MS7 1716 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Gm28919A0A087WP35 240 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ano3A2AHL1 981 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Copb2O55029 905 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Celf1P28659 486 aaKnown RBP10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Pdrg1P59048 133 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Zfp781Q0P5U5 243 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ankk1Q8BZ25 745 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Terb1Q8C0V1 768 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ifi35Q9D8C4 286 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Cbx6Q9DBY5 414 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Dusp10Q9ESS0 483 aa10.57□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Kif2aP28740 705 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Serpinc1P32261 465 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Kif22Q3V300 660 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ces3aQ63880 571 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ppp2r2cQ8BG02 447 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ces3bQ8VCU1 571 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 NapgQ9CWZ7 312 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Lztfl1Q9JHQ5 299 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Gja10Q9WUS4 505 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Zkscan5Q9Z1D8 819 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Bpifb4A2BGH0 617 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Cyp3a59D3Z2W7 503 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Gucy1b3O54865 620 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ttll12Q3UDE2 639 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Herc4Q6PAV2 1057 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ttll4Q80UG8 1193 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Dnm3Q8BZ98 863 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Arhgef6Q8K4I3 771 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Pcdha7Q91Y13 937 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Kansl3A2RSY1 903 aaKnown RBP10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Akap2O54931 893 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Dcaf17Q3TUL7 519 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 HelbQ6NVF4 1074 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Otop3Q80UF9 577 aa10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Nop53Q8BK35 484 aaKnown RBP10.56□□□□□ -0.72
Ldlr-202ENSMUST00000213114 EmbP21995 330 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Kif5bQ61768 963 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Caps2Q8BUG5 550 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Gpr108Q91WD0 569 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Pex3Q9QXY9 372 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Atp10bB1AWN4 1474 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Actn3O88990 900 aaKnown RBP10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 LtkP08923 888 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Exosc10P56960 887 aaKnown RBP10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 TxlnaQ6PAM1 554 aaKnown RBP10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Prpf40bQ80W14 870 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Bbs9Q811G0 885 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Abcc10Q8R4P9 1501 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Krt24A1L317 512 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Fam107bQ3TGF2 131 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Gm5592Q3V0A6 857 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Nyap1Q6PFX7 833 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Znf526Q8BI66 675 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Gpcpd1Q8C0L9 675 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ccdc89Q9DA73 370 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ybx3Q9JKB3 361 aaKnown RBP10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Sik3Q6P4S6 1311 aa10.55□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Zscan18E9PUD6 809 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Rnf216P58283 853 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Cct6aP80317 531 aaKnown RBP10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Rapgef1Q3UHC1 1224 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Map10Q8BJS7 891 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Rasgrp4Q8BTM9 673 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ubxn1Q922Y1 297 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ctnnbl1Q9CWL8 563 aaKnown RBP10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Hs6st3Q9QYK4 470 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Gm4758L7N258 96 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Il7P10168 154 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Fdx1P46656 188 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Krit1Q6S5J6 736 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 DpydQ8CHR6 1025 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Golph3lQ8R088 285 aaKnown RBP10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Dynll2Q9D0M5 89 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Magi2Q9WVQ1 1275 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Parp14Q2EMV9 1817 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Vmn2r68L7N2B3 851 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Nkx2-3P97334 362 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Rhpn1Q61085 643 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Rexo1Q7TT28 1213 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Mei4Q8BRM6 389 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Lzts2Q91YU6 671 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Fbxo3Q9DC63 480 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Dctpp1Q9QY93 170 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 1700018F24RikB2RW27 314 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Prkg1P0C605 671 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ms4a1P19437 291 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms