RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Gm44G3UW88 330 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Mdh1P14152 334 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Nxf2Q4ZGD8 691 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Camsap3Q80VC9 1252 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Acnat2Q8BGG9 420 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Kcnk13Q8R1P5 405 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Fgd4Q91ZT5 766 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Zcchc17Q9ESX4 241 aaKnown RBP10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Caskin1Q6P9K8 1431 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Xrcc6P23475 608 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Pde9aO70628 534 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Hoxb7P09024 217 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Ccdc153P0C7Q1 202 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 PparaP23204 468 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 PpardP35396 440 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 FanccP50652 591 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Nlrp2Q4PLS0 1046 aaKnown RBP10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Map3k2Q61083 619 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Hdac4Q6NZM9 1076 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Nudcd3Q8R1N4 363 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Ttc21bQ0HA38 1315 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Mrc2Q64449 1479 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 DbnlQ62418 436 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Ncoa7Q6DFV7 943 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 NelfbQ8C4Y3 580 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Prpf31Q8CCF0 499 aaKnown RBP10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Wars2Q9CYK1 360 aa10.01□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Cylc2B1AWN8 422 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Enc1O35709 589 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Chmp6P0C0A3 200 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Ephb4P54761 987 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Rtel1Q0VGM9 1203 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Snx25Q3ZT31 840 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Ccdc189Q6NZQ0 333 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Pcdhb22Q91XZ8 794 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Polr2dQ9D7M8 142 aaKnown RBP10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Ifi35Q9D8C4 286 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Epb41l3Q9WV92 929 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Tbc1d2B1AVH7 922 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Wdhd1P59328 1117 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Pja2Q80U04 707 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Enox1Q8BHR2 643 aaKnown RBP10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Ints4Q8CIM8 964 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Rbm42Q91V81 474 aaKnown RBP10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Spdl1Q923A2 608 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Dach2Q925Q8 634 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 A2mQ6GQT1 1474 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Naip5Q9R016 1403 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Cnbd1B1AWM0 430 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Pdzd8B9EJ80 1147 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Cfap70D3YVL2 1141 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Acsl3Q9CZW4 720 aaKnown RBP10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Mug1P28665 1476 aa10□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Spc25Q3UA16 226 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Arl13bQ640N2 427 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Myef2Q8C854 591 aaKnown RBP9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Stoml1Q8CI66 399 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Zbtb3Q91X45 518 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Fkbp6Q91XW8 327 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Ndufa13Q9ERS2 144 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Mlh3A0A1Y7VMP7 1443 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Tnip3A0A1D5RMN0 279 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Atp11aP98197 1187 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Stambpl1Q76N33 436 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Champ1Q8K327 802 aaKnown RBP9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Tada3Q8R0L9 432 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Slc4a4O88343 1079 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Card10P58660 1021 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Pde4dQ01063 747 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Zmym1Q3TJB1 983 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Dab2ipQ3UHC7 1189 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Cnksr2Q80YA9 1032 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Ccdc15Q8C9M2 810 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 St13Q99L47 371 aaKnown RBP9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 CutaQ9CQ89 177 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Spc24Q9D083 201 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 TchhA0A0B4J1F9 1599 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Svs3aF2Z472 265 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Krt19P19001 403 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Ccdc138Q0VF22 680 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Trim80Q3V061 624 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Ccdc125Q5U465 500 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Panx2Q6IMP4 677 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Rexo1Q7TT28 1213 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Ccdc155Q80VJ8 648 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 ParvgQ9ERD8 331 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Pdzd4Q9QY39 772 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Zscan12Q9Z1D7 501 aa9.99□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Pdzrn4E9PUZ9 1014 aa9.98□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Atf2P16951 487 aaKnown RBP9.98□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Adcy8P97490 1249 aa9.98□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Rnf10Q3UIW5 804 aa9.98□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Q3UJC8 639 aa9.98□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Serpinb3dQ6UKZ0 387 aa9.98□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Kif1bpQ6ZPU9 617 aa9.98□□□□□ -0.81
Ptpre-204ENSMUST00000209979 RragaQ80X95 313 aa9.98□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Dnaaf2Q8BPI1 814 aa9.98□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Tbx22Q8K402 517 aa9.98□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Slc12a5Q91V14 1138 aa9.98□□□□□ -0.81
Ptpre-204ENSMUST00000209979 Magi1Q6RHR9 1471 aa9.98□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms