RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Epha10Q8BYG9 1007 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 CenpqQ9CPQ5 267 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 NenfQ9CQ45 171 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Ndufb9Q9CQJ8 179 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Tob2Q9JM55 345 aa15.37■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Apba2P98084 750 aa15.36■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Tbc1d2bQ3U0J8 965 aa15.36■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Gimap7Q8R379 293 aa15.36■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Ddx27Q921N6 760 aaKnown RBP15.36■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Acot9Q9R0X4 439 aaKnown RBP15.36■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Mdh1bQ5F204 500 aa15.36■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Cep131Q62036 1060 aa15.36■□□□□ 0.05
Rnf4-204ENSMUST00000182047 DaglaQ6WQJ1 1044 aa15.36■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Frat2Q8K025 231 aa15.36■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Otud6bQ8K2H2 294 aa15.36■□□□□ 0.05
Rnf4-204ENSMUST00000182047 4930548H24RikQ9D496 437 aa15.36■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Elf2Q9JHC9 593 aa15.36■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Samsn1P57725 372 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Traf3ip1Q149C2 625 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Ezh2Q61188 746 aaKnown RBP15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Nell2Q61220 819 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Q8BZJ8 459 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Wasf1Q8R5H6 559 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Yeats4Q9CR11 227 aaKnown RBP15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Clip2Q9Z0H8 1047 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 1700003F12RikA2AKE5 210 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Dnajc25A2ALW5 357 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Znf568E9PYI1 671 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Irx2P81066 474 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Kif1bpQ6ZPU9 617 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Cdk8Q8R3L8 464 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Luzp1Q8R4U7 1068 aaKnown RBP15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Wdr64Q9D565 1086 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Ltbp2O08999 1813 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Ccdc88aQ5SNZ0 1873 aa15.35■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Map3k12Q60700 888 aa15.34■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Cyp4x1Q6A152 507 aa15.34■□□□□ 0.05
Rnf4-204ENSMUST00000182047 KhnynQ80U38 671 aa15.34■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Ppef2O35385 757 aa15.34■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Grin1P35438 938 aa15.34■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Cacnb3P54285 484 aa15.34■□□□□ 0.05
Rnf4-204ENSMUST00000182047 AaasP58742 546 aa15.34■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Nbr1P97432 988 aa15.34■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Mad2l2Q9D752 211 aa15.34■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Nrxn2E9Q7X7 1710 aa15.34■□□□□ 0.05
Rnf4-204ENSMUST00000182047 EgfrQ01279 1210 aa15.33■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Large2Q5XPT3 690 aa15.33■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Tacc1Q6Y685 774 aa15.33■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Mical1Q8VDP3 1048 aa15.33■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Telo2Q9DC40 840 aaKnown RBP15.33■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Xpo4Q9ESJ0 1151 aa15.33■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Rgs17Q9QZB0 210 aa15.33■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Rbm6S4R1W5 1118 aaKnown RBP15.33■□□□□ 0.05
Rnf4-204ENSMUST00000182047 Wnt7aP24383 349 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Rrp1P56183 494 aaKnown RBP15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Prl2c1Q5SVL9 228 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Insm1Q63ZV0 521 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Pcdhb14Q6PB90 796 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 GabreA2AMW3 916 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Cyp3a25O09158 503 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Eya3P97480 510 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Fam178bQ24JP3 464 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 LrmpQ60664 539 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 CtcfQ61164 736 aaKnown RBP15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 OplahQ8K010 1288 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Evc2Q8K1G2 1220 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Plekhg6Q8R0J1 787 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Prpf3Q922U1 683 aaKnown RBP15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Gpaa1Q9WTK3 621 aa15.33■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Btaf1E9QAE3 1848 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Calm1P0DP26 149 aaKnown RBP15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Calm2P0DP27 149 aaKnown RBP15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Calm3P0DP28 149 aaKnown RBP15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Pfkfb1P70266 471 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Znf653Q6YND2 615 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Hip1rQ9JKY5 1068 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Klrc1Q9Z202 244 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Eif6O55135 245 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Alppl2P24823 529 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Eef2P58252 858 aaKnown RBP15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Gjb4Q02738 266 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Kmt5bQ3U8K7 883 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Gas2l3Q3UWW6 683 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Haus7Q8BKT8 364 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 IarsQ8BU30 1262 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 WdpcpQ8C456 722 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 RadxQ8C779 850 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Mei1Q9D4I2 1268 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Eif4enif1Q9EST3 983 aaKnown RBP15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Tmem47Q9JJG6 181 aa15.32■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Gm43638A0A0J9YU36 694 aa15.31■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Sh3bp1P55194 680 aa15.31■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Scg2Q03517 617 aa15.31■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Klhdc9Q3USL1 350 aa15.31■□□□□ 0.04
Rnf4-204ENSMUST00000182047 GdaQ9R111 454 aa15.31■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Ecm29Q6PDI5 1840 aa15.31■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Ccdc6D3YZP9 469 aa15.31■□□□□ 0.04
Rnf4-204ENSMUST00000182047 A430078G23RikE9Q7Y4 484 aa15.31■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Fam196bQ6GQV1 535 aa15.31■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Fbxo41Q6NS60 873 aa15.31■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms