RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Slc1a4O35874 532 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Sept1P42209 366 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ccdc77Q9CZH8 489 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 AqrQ8CFQ3 1481 aaKnown RBP6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Palm3A2TJV2 734 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Myo1eE9Q634 1107 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Myo1fP70248 1099 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tmem247Q497K7 211 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 RilpQ5ND29 369 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Mum1Q6DID5 682 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Anks6Q6GQX6 883 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Rps6ka6Q7TPS0 764 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 3425401B19RikD3Z1D3 1412 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tbc1d2B1AVH7 922 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Zbed3Q9D0L1 228 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Q9D9H8 365 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ppip5k1A2ARP1 1436 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Cep85Q8BMK0 761 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Rcn2Q8BP92 320 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Taok3Q8BYC6 898 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Pde5aQ8CG03 865 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Brsk2Q69Z98 735 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Klhl29Q80T74 875 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Hirip3Q8BLH7 601 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Fkbp6Q91XW8 327 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Haus8Q99L00 373 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 DroshaQ5HZJ0 1373 aaKnown RBP6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tbc1d8bA3KGB4 1114 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ctnnd1P30999 938 aaKnown RBP6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Pdrg1P59048 133 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Lcn3Q62471 182 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Txndc9Q9CQ79 226 aa6.74□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Abcc5Q9R1X5 1436 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Nr1d1Q3UV55 615 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ifit1Q64282 463 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 KaznQ69ZS8 779 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Soga3Q6NZL0 945 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Speer3W4VSP1 261 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Kpnb1P70168 876 aaKnown RBP6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Hnrnph2P70333 449 aaKnown RBP6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 GpkowQ56A08 488 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ube2oQ6ZPJ3 1288 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Hpcal4Q8BGZ1 191 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tada3Q8R0L9 432 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 PlgrktQ9D3P8 147 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 MefvQ9JJ26 767 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Gga1Q8R0H9 635 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tbc1d1Q60949 1255 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Gga2Q6P5E6 603 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Cul5Q9D5V5 780 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Taf4bG5E8Z2 855 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Clcn6O35454 870 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 NapbP28663 298 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Trim38Q5SZ99 471 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Pfdn1Q9CWM4 122 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Pkd2l2Q9JLG4 621 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 JmyQ9QXM1 983 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Zdhhc9P59268 364 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Polr2eQ80UW8 210 aaKnown RBP6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tbc1d23Q8K0F1 684 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Cyth1Q9QX11 398 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Serpinb6eI7HJI3 429 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Prl7d1P04769 244 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Eef2P58252 858 aaKnown RBP6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Arhgap6O54834 987 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Zbtb16Q3UQ17 673 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Fam83gQ5SWY7 812 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Btbd11Q6GQW0 1109 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Mrpl12Q9DB15 201 aaKnown RBP6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 TefQ9JLC6 301 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Pck1Q9Z2V4 622 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Cylc2B1AWN8 422 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Gm28043E0CXC2 719 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Rgs2O08849 211 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Anks1aP59672 1150 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Enox1Q8BHR2 643 aaKnown RBP6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 HscbQ8K3A0 234 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Rnf8Q8VC56 488 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Dbn1Q9QXS6 706 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Rbbp8nlA2ABX0 614 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Gm5934D3Z4U6 212 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Hmgb3O54879 200 aaKnown RBP6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ccdc85aQ5SP85 500 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Cct6bQ61390 531 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ythdf3Q8BYK6 585 aaKnown RBP6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 PdhbQ9D051 359 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Itga9B8JK39 1036 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Klhl33G3UW92 533 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Fgd5Q80UZ0 1219 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tmco6Q8BQX5 494 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tmco1Q921L3 188 aaKnown RBP6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Efcab2Q9CQ46 164 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Syce1Q9D495 329 aa6.73□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ighmbp2P40694 993 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Zap70P43404 618 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Nek11Q8C0Q4 628 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Mta1Q8K4B0 715 aaKnown RBP6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ttc4Q8R3H9 386 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 ThegQ9JMB1 375 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Cetn1P41209 172 aa6.72□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms