RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Tspan18Q80WR1 248 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Map3k11Q80XI6 850 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ccdc150Q8CDI7 1110 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Riok1Q922Q2 567 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 RtcbQ99LF4 505 aaKnown RBP12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ube3bQ9ES34 1070 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Nek3Q9R0A5 511 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Plcb3P51432 1234 aaKnown RBP12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Pim2Q62070 370 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 TxlnaQ6PAM1 554 aaKnown RBP12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Sptlc3Q8BG54 563 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Tc2nQ91XT6 489 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Arhgef16Q3U5C8 713 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Jakmip3Q5DTN8 844 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ctdp1Q7TSG2 960 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Smc1bQ920F6 1248 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Trim11Q99PQ2 467 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ccdc47Q9D024 483 aaKnown RBP12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Popdc2Q9ES82 367 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Vstm4T1NXB5 319 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 A0A1W2P6Q8 802 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Gm9048A0A1W2P7H4 802 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 A0A1W2P7S8 802 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 A0A1W2P7Z8 802 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Gm9046A0A1W2P855 802 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Rsrc2A2RTL5 376 aaKnown RBP12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Mdh1P14152 334 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Prl3d1P18121 224 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Pax3P24610 479 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Cdc5lQ6A068 802 aaKnown RBP12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 IqcgQ80W32 419 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Tcp11l1Q8BTG3 509 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 SowahdQ8BY98 327 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Sox30Q8CGW4 782 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Lama4P97927 1816 aa12.18□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Kif3cO35066 796 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Pde6aP27664 859 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Hdgfl1Q2VPR5 283 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ccdc69Q3TCJ8 202 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Vars2Q3U2A8 1060 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 FntaQ61239 377 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Snd1Q78PY7 910 aaKnown RBP12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Gpt2Q8BGT5 522 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ranbp6Q8BIV3 1105 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 9230110C19RikQ8CC70 267 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Dbndd1Q9CZ00 160 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Akt1s1Q9D1F4 257 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Myo1cQ9WTI7 1063 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Pdcd6ipQ9WU78 869 aaKnown RBP12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 CpdO89001 1377 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Col3a1P08121 1464 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Cyp2j7A0A140T8U1 504 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Bin2D3Z6Q9 489 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Myo1bP46735 1107 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Bicdl2Q8CHW5 507 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Q8VDP2 222 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Krt84Q99M73 603 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ccdc39Q9D5Y1 937 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Arl10Q9QXJ4 243 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Mast3Q3U214 1321 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Tpm3-rs7D3Z2H9 248 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Sept1P42209 366 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Washc4Q3UMB9 1173 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Hpcal4Q8BGZ1 191 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 LarsQ8BMJ2 1178 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Iqcb1Q8BP00 598 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Tcp11l2Q8K1H7 517 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Wdr64Q9D565 1086 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Pik3ap1Q9EQ32 811 aa12.17□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ces1hD3Z298 562 aa12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Pde8bE9Q4S1 865 aa12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Trim34bJ3QNR8 485 aa12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 C87499Q3UX49 493 aa12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Tbx2Q60707 711 aa12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Mrps31Q61733 384 aaKnown RBP12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Rassf4Q8CB96 322 aa12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Etnk1Q9D4V0 363 aa12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Pla2g4fQ50L41 855 aa12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Msl1Q6PDM1 616 aa12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Eaf2Q91ZD6 262 aa12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Hip1rQ9JKY5 1068 aa12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Suclg2Q9Z2I8 433 aa12.16□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Il7P10168 154 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Nek1P51954 1203 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 LbrQ3U9G9 626 aaKnown RBP12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Il17raQ60943 864 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ctr9Q62018 1173 aaKnown RBP12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Sumf1Q8R0F3 372 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Tfcp2Q9ERA0 502 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Myo3bQ1EG27 1305 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Myo1aO88329 1043 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Rad23aP54726 363 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Agtpbp1Q641K1 1218 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Cfap100Q80VN0 613 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ercc4Q9QZD4 917 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Greb1lB9EJV3 1913 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Myh7Q91Z83 1935 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Med23Q80YQ2 1367 aa12.15□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Naaladl2A0A0N4SUJ3 795 aa12.15□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Gcom1E9PZ54 550 aa12.15□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms