RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Dnajc2P54103 621 aaKnown RBP35.68■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Pkp1P97350 728 aaKnown RBP35.68■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Dcaf15Q6PFH3 600 aa35.68■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 1700010I14RikQ7TPG0 532 aa35.68■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 9230110C19RikQ8CC70 267 aa35.68■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Pms1Q8K119 917 aa35.68■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Vmn1r199Q8R280 367 aa35.68■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Stx8O88983 236 aa35.67■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Myl3P09542 204 aa35.67■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Tdrd1Q99MV1 1172 aa35.67■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Oog1E9Q5G7 496 aa35.66■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 F2rP30558 430 aa35.66■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Eme2Q56A04 373 aa35.66■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Spryd7Q3TFQ1 196 aa35.65■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Cchcr1Q8K2I2 770 aa35.65■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Mad2l2Q9D752 211 aa35.65■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Clstn1Q9EPL2 979 aa35.65■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Adgrg6Q6F3F9 1165 aa35.65■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Mms22lB1AUR6 1238 aa35.64■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 CenpbP27790 599 aa35.64■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Utp18Q5SSI6 552 aaKnown RBP35.64■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Swap70Q6A028 585 aaKnown RBP35.64■■■■□ 3.3
Ctdnep1-201ENSMUST00000108593 Suclg2Q9Z2I8 433 aa35.63■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 EvcP57680 1005 aa35.62■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Stk11ipQ3TAA7 1072 aa35.62■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Usp14Q9JMA1 493 aaKnown RBP35.62■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Zmynd8A2A484 1235 aaKnown RBP35.61■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Bub1bQ9Z1S0 1052 aa35.61■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 TicrrQ8BQ33 1889 aa35.61■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Tshz1Q5DTH5 1084 aa35.61■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Mrpl50Q8VDT9 159 aaKnown RBP35.61■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Usp17ldG5E8G2 545 aa35.6■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Usp17lcG5E8I7 545 aa35.6■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Btn2a2A4QPC6 514 aa35.59■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Pus7B7ZNL8 666 aaKnown RBP35.59■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 FlgP11088 336 aa35.59■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Traf5P70191 558 aa35.59■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Rapgefl1Q68EF8 662 aa35.59■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Dppa3Q8QZY3 150 aa35.59■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Mettl16Q9CQG2 553 aaKnown RBP35.59■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Plcg1Q62077 1302 aa35.58■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Syne4Q8CII8 388 aa35.58■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Ccdc47Q9D024 483 aaKnown RBP35.58■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Lonrf3Q9D4H7 753 aa35.58■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Cnpy3Q9DAU1 276 aa35.58■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Tmem59lQ7TNI2 337 aa35.57■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Riox2Q8CD15 465 aa35.57■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 DymQ8CHY3 669 aa35.57■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Slc18a1Q8R090 521 aa35.57■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 BrapQ99MP8 591 aa35.57■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 Btbd19S4R1I0 287 aa35.57■■■■□ 3.29
Ctdnep1-201ENSMUST00000108593 1700006A11RikB9EHI3 544 aa35.57■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Traf3ip1Q149C2 625 aa35.57■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Tmtc2Q56A06 836 aa35.57■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Lrrc24Q8BHA1 521 aa35.57■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Ccdc7Q9D541 371 aa35.57■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Brca1P48754 1812 aa35.56■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Dicer1Q8R418 1916 aa35.56■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Gm42688A0A0R3P9D1 673 aa35.56■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 LtbrP50284 415 aa35.56■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 VmacQ8BP01 174 aa35.56■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Ccdc142Q8CAI1 738 aa35.56■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Defb15Q8R2I5 79 aa35.56■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Vmn2r23E9PXI5 849 aa35.55■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Foxn1Q61575 648 aa35.55■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Ms4a5Q810P8 197 aa35.55■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 PpatQ8CIH9 517 aa35.55■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Usp33Q8R5K2 909 aa35.55■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Sirt2Q8VDQ8 389 aa35.55■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Rufy3Q9D394 469 aa35.55■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Rexo5D3YW29 759 aa35.54■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Irf5P56477 497 aa35.54■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Gimap7Q8R379 293 aa35.54■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Tubb6Q922F4 447 aa35.54■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Rnf181Q9CY62 165 aa35.54■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Me1P06801 572 aa35.54■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Sfi1Q3UZY0 1216 aaKnown RBP35.54■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Haus6Q6NV99 933 aaKnown RBP35.54■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Gmcl1Q920G9 524 aa35.54■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Vta1Q9CR26 309 aa35.54■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Cyp27a1Q9DBG1 533 aa35.54■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Smarce1O54941 411 aaKnown RBP35.53■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Cyp26a1O55127 497 aa35.53■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Trmt1Q3TX08 663 aa35.53■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Bri3bpQ8BXV2 253 aa35.53■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 KinQ8K339 391 aa35.53■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Srgap1Q91Z69 1062 aa35.53■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Fsip1Q9D3V5 435 aa35.53■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Calm1P0DP26 149 aaKnown RBP35.52■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Calm2P0DP27 149 aaKnown RBP35.52■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Calm3P0DP28 149 aaKnown RBP35.52■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Fam83hQ148V8 1209 aa35.51■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Lca5Q80ST9 704 aa35.51■■■■□ 3.28
Ctdnep1-201ENSMUST00000108593 Ces1hD3Z298 562 aa35.5■■■■□ 3.27
Ctdnep1-201ENSMUST00000108593 LdhaP06151 332 aaKnown RBP35.5■■■■□ 3.27
Ctdnep1-201ENSMUST00000108593 Micall1Q8BGT6 870 aa35.5■■■■□ 3.27
Ctdnep1-201ENSMUST00000108593 Pdcd6ipQ9WU78 869 aaKnown RBP35.5■■■■□ 3.27
Ctdnep1-201ENSMUST00000108593 Rfpl4bJ3QPR6 266 aa35.5■■■■□ 3.27
Ctdnep1-201ENSMUST00000108593 Copb2O55029 905 aa35.5■■■■□ 3.27
Ctdnep1-201ENSMUST00000108593 Lamp1P11438 406 aaKnown RBP35.5■■■■□ 3.27
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms