RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Glis3Q6XP49 780 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Ehd2Q8BH64 543 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Brd3Q8K2F0 726 aaKnown RBP20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Tgs1Q923W1 853 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 NenfQ9CQ45 171 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Stag1Q9D3E6 1258 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Naaladl2A0A0N4SUJ3 795 aa20.86■□□□□ 0.93
Trim47-202ENSMUST00000106441 Zbtb7aO88939 569 aaKnown RBP20.86■□□□□ 0.93
Trim47-202ENSMUST00000106441 AaasP58742 546 aa20.86■□□□□ 0.93
Trim47-202ENSMUST00000106441 MbipQ99LQ1 341 aa20.86■□□□□ 0.93
Trim47-202ENSMUST00000106441 Thrap3Q569Z6 951 aaKnown RBP20.86■□□□□ 0.93
Trim47-202ENSMUST00000106441 Cfap69Q8BH53 942 aa20.86■□□□□ 0.93
Trim47-202ENSMUST00000106441 Tmem179Q8BHH9 233 aa20.86■□□□□ 0.93
Trim47-202ENSMUST00000106441 Sil1Q9EPK6 465 aa20.86■□□□□ 0.93
Trim47-202ENSMUST00000106441 Kcnh3Q9WVJ0 1095 aa20.86■□□□□ 0.93
Trim47-202ENSMUST00000106441 LtkP08923 888 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Slc7a1Q09143 622 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 SfswapQ3USH5 945 aaKnown RBP20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Mns1Q61884 491 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Krt40Q6IFX3 439 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Slc44a1Q6X893 653 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Cep120Q7TSG1 988 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Slitrk3Q810B9 980 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Sept12Q9D451 317 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Atp12aQ9Z1W8 1035 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Chd5A2A8L1 1946 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Kmt5bQ3U8K7 883 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Kcnq3Q8K3F6 873 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Mtmr6Q8VE11 617 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Vnn1Q9Z0K8 512 aa20.85■□□□□ 0.93
Trim47-202ENSMUST00000106441 Llgl2Q3TJ91 1027 aa20.84■□□□□ 0.93
Trim47-202ENSMUST00000106441 Cnnm2Q3TWN3 875 aa20.84■□□□□ 0.93
Trim47-202ENSMUST00000106441 Gtpbp6Q3U6U5 514 aa20.84■□□□□ 0.93
Trim47-202ENSMUST00000106441 Acap3Q6NXL5 833 aa20.84■□□□□ 0.93
Trim47-202ENSMUST00000106441 Ranbp6Q8BIV3 1105 aa20.84■□□□□ 0.93
Trim47-202ENSMUST00000106441 Znf428Q8C1M2 176 aa20.84■□□□□ 0.93
Trim47-202ENSMUST00000106441 Rassf4Q8CB96 322 aa20.84■□□□□ 0.93
Trim47-202ENSMUST00000106441 Paf1Q8K2T8 535 aa20.84■□□□□ 0.93
Trim47-202ENSMUST00000106441 FAM186AQ9D9R9 1790 aa20.83■□□□□ 0.93
Trim47-202ENSMUST00000106441 Vil1Q62468 827 aa20.83■□□□□ 0.93
Trim47-202ENSMUST00000106441 Ddx31Q6NZQ2 687 aaKnown RBP20.83■□□□□ 0.93
Trim47-202ENSMUST00000106441 Luc7l2Q7TNC4 392 aaKnown RBP20.83■□□□□ 0.93
Trim47-202ENSMUST00000106441 Haus7Q8BKT8 364 aa20.83■□□□□ 0.93
Trim47-202ENSMUST00000106441 Tbc1d7Q9D0K0 293 aa20.83■□□□□ 0.93
Trim47-202ENSMUST00000106441 Ecm29Q6PDI5 1840 aa20.83■□□□□ 0.92
Trim47-202ENSMUST00000106441 Irx2P81066 474 aa20.83■□□□□ 0.92
Trim47-202ENSMUST00000106441 Trak2Q6P9N8 913 aa20.83■□□□□ 0.92
Trim47-202ENSMUST00000106441 Gjd4Q8BSD4 364 aa20.83■□□□□ 0.92
Trim47-202ENSMUST00000106441 Lrrc2Q8VDB8 371 aa20.83■□□□□ 0.92
Trim47-202ENSMUST00000106441 Gm3893E9Q1I1 302 aa20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 Anp32eP97822 260 aaKnown RBP20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 Ccdc174Q3U155 467 aa20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 CbarpQ66L44 698 aa20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 Lmod1Q8BVA4 595 aa20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 Ly6iQ9WU67 134 aa20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 Mrvi1Q9WUX5 899 aaKnown RBP20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 Dnajc2P54103 621 aaKnown RBP20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 Ccdc102aQ3TMW1 549 aa20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 Cyp24a1Q64441 514 aa20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 Olfm5Q8BU90 496 aa20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 Fam76aQ922G2 307 aa20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 ChmQ9QXG2 665 aa20.82■□□□□ 0.92
Trim47-202ENSMUST00000106441 Scn9aQ62205 1984 aa20.81■□□□□ 0.92
Trim47-202ENSMUST00000106441 Gm5624F6ZZG8 207 aa20.81■□□□□ 0.92
Trim47-202ENSMUST00000106441 Kif3cO35066 796 aa20.81■□□□□ 0.92
Trim47-202ENSMUST00000106441 SsbP32067 415 aaKnown RBP20.81■□□□□ 0.92
Trim47-202ENSMUST00000106441 Uba5Q8VE47 403 aa20.81■□□□□ 0.92
Trim47-202ENSMUST00000106441 IcoslgQ9JHJ8 322 aa20.81■□□□□ 0.92
Trim47-202ENSMUST00000106441 Col20a1Q923P0 1320 aa20.81■□□□□ 0.92
Trim47-202ENSMUST00000106441 Atp8b5A3FIN4 1183 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Ifi207E9Q3L4 978 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 EmbP21995 330 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 NapbP28663 298 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Siah1aP61092 282 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Psmd1Q3TXS7 953 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Klhl30Q8C3F7 581 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Sirt2Q8VDQ8 389 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Eaf2Q91ZD6 262 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Ccdc39Q9D5Y1 937 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 A0A1L1SQF0 893 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Krt24A1L317 512 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Specc1lQ2KN98 1118 aaKnown RBP20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Clec16aQ80U30 1036 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Asnsd1Q8BFS9 627 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Hps6Q8BLY7 805 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Q8K2W9 541 aa20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Gnl2Q99LH1 728 aaKnown RBP20.8■□□□□ 0.92
Trim47-202ENSMUST00000106441 Ccdc191J3QQ27 883 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Capn2O08529 700 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Ric8aQ3TIR3 530 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Prl2c1Q5SVL9 228 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Tbx2Q60707 711 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Bag1Q60739 355 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Tpm4Q6IRU2 248 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Glrx3Q9CQM9 337 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Pik3ap1Q9EQ32 811 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Cdcp1Q5U462 833 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Mxd3Q80US8 206 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 RbsnQ80Y56 783 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Smc2Q8CG48 1191 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms