RNA–Protein interactions for RNA: ENSMUST00000072551.6

Clrn1-203, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 1,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-203ENSMUST00000072551 Ces3bQ8VCU1 571 aa13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Tomm22Q9CPQ3 142 aa13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Bcs1lQ9CZP5 418 aa13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Cnpy3Q9DAU1 276 aa13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Scn3aA2ASI5 1947 aa13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Cyp26a1O55127 497 aa13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Usp5P56399 858 aaKnown RBP13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Zfp341Q6PGC9 846 aa13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Lrrc15Q80X72 579 aa13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Ireb2Q811J3 963 aaKnown RBP13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 CerkQ8K4Q7 531 aa13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Ttll1Q91V51 423 aa13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Nop2Q922K7 793 aaKnown RBP13.31□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Usp31E9Q6Y8 1344 aa13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Arrdc4A0A0B4J1F4 415 aa13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Vwa3bJ9JI28 736 aa13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Fgfr2P21803 821 aa13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Ppfia3P60469 1194 aa13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Scg2Q03517 617 aa13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 1700013D24RikQ0P521 120 aa13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Ppp1r9bQ6R891 817 aaKnown RBP13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Lrrc24Q8BHA1 521 aa13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Cog5Q8C0L8 829 aa13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Tm4sf4Q91XD3 202 aa13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Pes1Q9EQ61 584 aaKnown RBP13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Znf287Q9EQB9 759 aa13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 SmapQ9R0P4 181 aaKnown RBP13.3□□□□□ -0.28
Clrn1-203ENSMUST00000072551 PhipQ8VDD9 1821 aaKnown RBP13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Palm3A2TJV2 734 aa13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Elmsan1E9Q2I4 1089 aaKnown RBP13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Stag2O35638 1231 aa13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Magea8O89012 320 aa13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Traf5P70191 558 aa13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Cct2P80314 535 aaKnown RBP13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Otud5Q3U2S4 566 aa13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 LrmpQ60664 539 aa13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Rasa3Q60790 834 aa13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Nxf7Q80SZ6 620 aaKnown RBP13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Scfd1Q8BRF7 639 aaKnown RBP13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Slc4a7Q8BTY2 1034 aa13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Bri3bpQ8BXV2 253 aa13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Epha10Q8BYG9 1007 aa13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 EhhadhQ9DBM2 718 aa13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Eid1Q9DCR4 169 aa13.29□□□□□ -0.28
Clrn1-203ENSMUST00000072551 PatjQ63ZW7 1834 aa13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Usp17ldG5E8G2 545 aa13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Usp17lcG5E8I7 545 aa13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Copb2O55029 905 aa13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 1700123L14RikQ3V2K7 440 aa13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Secisbp2lQ6A098 1086 aaKnown RBP13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Tsr2Q8C8T8 191 aa13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 BrapQ99MP8 591 aa13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Zdbf2Q5SS00 2493 aaKnown RBP13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Mms22lB1AUR6 1238 aa13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 1700006A11RikB9EHI3 544 aa13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 HunkO88866 714 aa13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Btbd19S4R1I0 287 aa13.28□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Sbf2E9PXF8 1872 aa13.27□□□□□ -0.28
Clrn1-203ENSMUST00000072551 Gm44503E9PYU5 387 aa13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Ppef2O35385 757 aa13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Serpinb2P12388 415 aa13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 ChgaP26339 463 aaKnown RBP13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Syt1P46096 421 aa13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 VegfbP49766 207 aa13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Sap30bpQ02614 308 aa13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Arl14Q3SXC5 192 aa13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Ttbk2Q3UVR3 1243 aa13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Ppp1r10Q80W00 888 aaKnown RBP13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Bola3Q8CEI1 110 aa13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 KinQ8K339 391 aa13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Dnaaf4Q8R368 420 aa13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Kdm4cQ8VCD7 1054 aa13.27□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Zmynd8A2A484 1235 aaKnown RBP13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Ces1hD3Z298 562 aa13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 DaxxO35613 739 aa13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Kctd1Q5M956 257 aa13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Rapgefl1Q68EF8 662 aa13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Sv2cQ69ZS6 727 aa13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Fsd1Q7TPM6 496 aa13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Tpcn2Q8BWC0 731 aa13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Cchcr1Q8K2I2 770 aa13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Ero1bQ8R2E9 467 aa13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Gimap7Q8R379 293 aa13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Rbm19Q8R3C6 952 aaKnown RBP13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Mettl16Q9CQG2 553 aaKnown RBP13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Dmrtc1Q9D9R7 182 aa13.26□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Ccnd3P30282 292 aa13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Stat1P42225 749 aa13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Lilrb3P97484 841 aa13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Mdh1bQ5F204 500 aa13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Slain1Q68FF7 579 aa13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Haus6Q6NV99 933 aaKnown RBP13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Filip1lQ6P6L0 1131 aa13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Pxylp1Q8BHA9 480 aa13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Ranbp6Q8BIV3 1105 aa13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Fam83aQ8K2P2 436 aa13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Il31raQ8K5B1 716 aa13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Slc18a1Q8R090 521 aa13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Vmn1r199Q8R280 367 aa13.25□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Sapcd2Q9D818 391 aa13.25□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms