RNA–Protein interactions for RNA: ENSMUST00000064098.13

Ldb3-204, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-204ENSMUST00000064098 Akap4Q60662 849 aa13.9□□□□□ -0.18
Ldb3-204ENSMUST00000064098 Rbm28Q8CGC6 750 aaKnown RBP13.9□□□□□ -0.18
Ldb3-204ENSMUST00000064098 C8aQ8K182 587 aa13.9□□□□□ -0.18
Ldb3-204ENSMUST00000064098 Angel2Q8K1C0 544 aa13.9□□□□□ -0.18
Ldb3-204ENSMUST00000064098 Gpsm2Q8VDU0 679 aa13.9□□□□□ -0.18
Ldb3-204ENSMUST00000064098 Ttll1Q91V51 423 aa13.9□□□□□ -0.18
Ldb3-204ENSMUST00000064098 PdgfdQ925I7 370 aa13.9□□□□□ -0.18
Ldb3-204ENSMUST00000064098 Tomm22Q9CPQ3 142 aa13.9□□□□□ -0.18
Ldb3-204ENSMUST00000064098 PtmsQ9D0J8 101 aaKnown RBP13.9□□□□□ -0.18
Ldb3-204ENSMUST00000064098 Pcdh15Q99PJ1 1943 aa13.9□□□□□ -0.18
Ldb3-204ENSMUST00000064098 XdhQ00519 1335 aa13.9□□□□□ -0.18
Ldb3-204ENSMUST00000064098 Mmp20P57748 482 aa13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Zfp953Q3UPV7 304 aa13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 4933416C03RikQ3V063 378 aa13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Gimap7Q8R379 293 aa13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Nop2Q922K7 793 aaKnown RBP13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Slc4a9E9PUP3 929 aa13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Gm20425E9Q035 978 aaKnown RBP13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Prkg1P0C605 671 aa13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 SrprbP47758 269 aa13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Mex3cQ05A36 652 aaKnown RBP13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Traf3ip1Q149C2 625 aa13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Eme2Q56A04 373 aa13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Stx6Q9JKK1 255 aa13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 SmapQ9R0P4 181 aaKnown RBP13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Pitpnm2Q6ZPQ6 1335 aa13.89□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Gadd45bP22339 160 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Tmtc2Q56A06 836 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Abhd15Q5F2F2 459 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 DpydQ8CHR6 1025 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Gripap1Q8VD04 806 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 CsadQ9DBE0 493 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Pagr1bF6V0H0 108 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Llgl2Q3TJ91 1027 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Limch1Q3UH68 1057 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Cep63Q3UPP8 700 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Tll1Q62381 1013 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Smarcc2Q6PDG5 1213 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Pagr1aQ99L02 253 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Atp8b3Q6UQ17 1335 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 TicrrQ8BQ33 1889 aa13.88□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Stag2O35638 1231 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Calm1P0DP26 149 aaKnown RBP13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Calm2P0DP27 149 aaKnown RBP13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Calm3P0DP28 149 aaKnown RBP13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Prr7Q3V0I2 269 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Ces3aQ63880 571 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Ccdc148Q6P5U8 527 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Spata21Q8BHW6 681 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Me3Q8BMF3 604 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Scfd1Q8BRF7 639 aaKnown RBP13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Ces3bQ8VCU1 571 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Rcan1Q9JHG6 198 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Znf697Q569E7 569 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Ranbp6Q8BIV3 1105 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 CerkQ8K4Q7 531 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Eid1Q9DCR4 169 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Il21rQ9JHX3 529 aa13.87□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Palm3A2TJV2 734 aa13.86□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Foxp1P58462 705 aa13.86□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Scfd2Q8BTY8 684 aa13.86□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Pdcl3Q8BVF2 240 aa13.86□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Prkab1Q9R078 270 aa13.86□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Wdr19Q3UGF1 1341 aa13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Rgs9O54828 675 aa13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 MycnP03966 462 aaKnown RBP13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Slc10a4Q3UEZ8 437 aa13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Ppp2r5bQ6PD28 497 aa13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Ccp110Q7TSH4 1004 aa13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Trpm7Q923J1 1863 aa13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Babam1Q3UI43 333 aa13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Lrrc15Q80X72 579 aa13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Rtn1Q8K0T0 780 aa13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Ubac1Q8VDI7 409 aa13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Bloc1s2Q9CWG9 143 aa13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Usp34Q6ZQ93 3582 aa13.85□□□□□ -0.19
Ldb3-204ENSMUST00000064098 SynrgQ5SV85 1306 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 A0A1Y7VML8 143 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Ppef1O35655 650 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Copb2O55029 905 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Cplx2P84086 134 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Gtpbp6Q3U6U5 514 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Ttll12Q3UDE2 639 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Mdh1bQ5F204 500 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Kif1bpQ6ZPU9 617 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Slitrk3Q810B9 980 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 U2af1l4Q8BGJ9 220 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Arhgef6Q8K4I3 771 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Lrrc2Q8VDB8 371 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Cep57l1Q8VDS7 400 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Trim59Q922Y2 403 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Sall1Q9ER74 1322 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Ddx55Q6ZPL9 600 aaKnown RBP13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Lca5Q80ST9 704 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Tbc1d5Q80XQ2 815 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Epha10Q8BYG9 1007 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Rbm19Q8R3C6 952 aaKnown RBP13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 ZwintQ9CQU5 252 aa13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Telo2Q9DC40 840 aaKnown RBP13.84□□□□□ -0.19
Ldb3-204ENSMUST00000064098 Usp31E9Q6Y8 1344 aa13.83□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms