RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 GnaqP21279 359 aa11.41□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Ccdc68Q8BVC4 333 aa11.41□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Akap5D3YVF0 745 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Arhgap44Q5SSM3 814 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Myo1gQ5SUA5 1024 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Ppp1r14cQ8R4S0 164 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Rapgef3Q8VCC8 918 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 FibpQ9JI19 357 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Gm5168Q4KL04 211 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Kif9Q9WV04 790 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Mfsd4b4J3QNS5 503 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Cwf19l2Q8BG79 887 aaKnown RBP11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Calml3Q9D6P8 149 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Ifit2Q64112 472 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Zfp202Q8C879 641 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Cul4bA2A432 970 aaKnown RBP11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Zkscan16A2ALW2 728 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Prpf38aQ4FK66 312 aaKnown RBP11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Elf1Q60775 612 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Rab34Q64008 259 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Ccdc62E9PVD1 701 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Palb2Q3U0P1 1104 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Enox1Q8BHR2 643 aaKnown RBP11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Mrps25Q9D125 171 aaKnown RBP11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Hdac6Q9Z2V5 1149 aa11.4□□□□□ -0.58
Col6a3-201ENSMUST00000056925 Dnajc25A2ALW5 357 aa11.4□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Gm10110D3Z5M2 615 aa11.4□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ube4aE9Q735 1028 aa11.4□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Nrg3O35181 713 aa11.4□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Map3k5O35099 1380 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Cct6aP80317 531 aaKnown RBP11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Mrps26Q80ZS3 200 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Pde5aQ8CG03 865 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ttc13A0A1L1SSC7 844 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 DgkiD3YWQ0 1071 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Pde1bQ01065 535 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Dnajc6Q80TZ3 938 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Zscan22Q8BGS5 496 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 NsmfQ99NF2 532 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ttc5Q99LG4 440 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Rgs3Q9DC04 966 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Foxd4Q60688 444 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ccdc153P0C7Q1 202 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Calm1P0DP26 149 aaKnown RBP11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Calm2P0DP27 149 aaKnown RBP11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Calm3P0DP28 149 aaKnown RBP11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Tmco4Q91WU4 631 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Klhl41A2AUC9 606 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Exoc3Q6KAR6 755 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 CntrobQ8CB62 887 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Zscan12Q9Z1D7 501 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ctnnd1P30999 938 aaKnown RBP11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Dab1P97318 588 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Utp18Q5SSI6 552 aaKnown RBP11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Polr3cQ9D483 533 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Riok3Q9DBU3 519 aaKnown RBP11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Epb41l3Q9WV92 929 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Sdccag3A2AIW0 432 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Izumo3A6PWV3 263 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ccdc92bQ5SUE3 299 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Tmod2Q9JKK7 351 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Mtmr7Q9Z2C9 660 aa11.39□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ppip5k1A2ARP1 1436 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Krt4P07744 525 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ica1lQ3TY65 431 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Sec23ipQ6NZC7 998 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Gimap8Q75N62 688 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Anapc5Q8BTZ4 740 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Rbm42Q91V81 474 aaKnown RBP11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Polr2dQ9D7M8 142 aaKnown RBP11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Abcb4P21440 1276 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Gm10488Q4KL05 212 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Tbc1d1Q60949 1255 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Gm14819Q62478 212 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Wdr60Q8C761 999 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Kif21bQ9QXL1 1668 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ighmbp2P40694 993 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Lmntd2Q0VET5 664 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 GsnP13020 780 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 C130026I21RikQ8C898 291 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Snrnp27Q8K194 155 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Fkbp6Q91XW8 327 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ndc80Q9D0F1 642 aaKnown RBP11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Sun1Q9D666 913 aaKnown RBP11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ccdc33Q3ULW6 985 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Adam1aQ60813 791 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 RpainQ9CWY9 219 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Fam160b2Q80YR2 744 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Rps6ka2Q9WUT3 733 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Gna11P21278 359 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Samsn1P57725 372 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Kctd16Q5DTY9 427 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Dzip3Q7TPV2 1204 aa11.38□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Arhgap4B1AUY3 965 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Dnajc3Q91YW3 504 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Tex9Q9D845 387 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Sycp2Q9CUU3 1500 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Pde6bP23440 856 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Pbxip1Q3TVI8 727 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Lrch2Q3UMG5 773 aa11.37□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms