RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Stx8O88983 236 aa11.82□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Ccdc80Q8R2G6 949 aa11.82□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Farp2Q91VS8 1065 aa11.82□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Usp5P56399 858 aaKnown RBP11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Neurog2P70447 263 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Nrbf2Q8VCQ3 287 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Xrcc6P23475 608 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 EsrrgP62509 458 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Zfp781Q0P5U5 243 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Atp2a3Q64518 1038 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 SpopQ6ZWS8 374 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Sept11Q8C1B7 431 aaKnown RBP11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Irx5Q9JKQ4 484 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Acnat2Q8BGG9 420 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Ero1aQ8R180 464 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Cul1Q9WTX6 776 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 1700113H08RikE9Q9Q5 327 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Gbp10Q000W5 611 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Mcm7Q61881 719 aaKnown RBP11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 CtifQ6PEE2 600 aaKnown RBP11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Recql4Q75NR7 1216 aaKnown RBP11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Actr5Q80US4 605 aaKnown RBP11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 DlatQ8BMF4 642 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Zbtb3Q91X45 518 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Mrpl40Q9Z2Q5 206 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Stx12Q9ER00 274 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Gna11P21278 359 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Cct6aP80317 531 aaKnown RBP11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Klhl29Q80T74 875 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 AdarQ99MU3 1178 aaKnown RBP11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Fam213aQ9CYH2 218 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Erich2E9Q1A6 463 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 PhbP67778 272 aaKnown RBP11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Cabs1Q8C633 391 aa11.81□□□□□ -0.52
Nipbl-201ENSMUST00000052965 NsmfQ99NF2 532 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Gm136Q3V037 328 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Kif1bpQ6ZPU9 617 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 HgsQ99LI8 775 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Erbb4Q61527 1308 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Esyt2Q3TZZ7 845 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Mlh1Q9JK91 760 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Znf518aB2RRF6 1478 aaKnown RBP11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Pdzrn4E9PUZ9 1014 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Olfm3P63056 478 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Znf830Q8R1N0 363 aaKnown RBP11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Cttnbp2nlQ99LJ0 638 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 RarsQ9D0I9 660 aaKnown RBP11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Dennd4bQ3U1Y4 1499 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Nhej1Q3KNJ2 295 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Krt12Q64291 487 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Ppp2r5bQ6PD28 497 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Nucks1Q80XU3 234 aaKnown RBP11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Fam204aQ8C6C7 236 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Rnf17Q99MV7 1640 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Sept2P42208 361 aaKnown RBP11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Gucy2fQ5SDA5 1108 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Ccz1Q8C1Y8 480 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Apol10aQ8CCA5 318 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Amotl2Q8K371 772 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Fsip1Q9D3V5 435 aa11.8□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Dnm2P39054 870 aaKnown RBP11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Ccdc129Q14B48 1034 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Pcdha7Q91Y13 937 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Ppp1r9aH3BJD6 1292 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Enc1O35709 589 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Kank4Q6P9J5 1016 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Myo3bQ1EG27 1305 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 PpardP35396 440 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Git1Q68FF6 770 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Slc14a2Q8R4T9 930 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Rsad2Q8CBB9 362 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Ttc4Q8R3H9 386 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Krt18P05784 423 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Pfkfb1P70266 471 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Snx14Q8BHY8 964 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Cplx3Q8R1B5 158 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Tldc2A2ACG1 198 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Ccdc87Q8CDL9 855 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Abca8bQ8K440 1620 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Uggt1Q6P5E4 1551 aa11.79□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Slc4a4O88343 1079 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Trim37Q6PCX9 961 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 RbsnQ80Y56 783 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 CgasQ8C6L5 507 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Sec63Q8VHE0 760 aaKnown RBP11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Trim60Q8VI40 466 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Atg4a-psA0A0G2JFS9 396 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 GopcQ8BH60 463 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Atg4aQ8C9S8 396 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Stx17Q9D0I4 301 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Slc13a1Q9JHI4 594 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Arhgap42B2RQE8 841 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Q3TYL0 343 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Rapgef1Q3UHC1 1224 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 HellsQ60848 821 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Sgsm2Q80U12 1005 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Ppp1r12bQ8BG95 976 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Q8BWG4 1187 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Champ1Q8K327 802 aaKnown RBP11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Trim42Q9D2H5 723 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms