RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Slc10a4Q3UEZ8 437 aa10.35□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Cep63Q3UPP8 700 aa10.35□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Tmtc2Q56A06 836 aa10.35□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Dock2Q8C3J5 1828 aa10.34□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Catsper2A2ARP9 588 aa10.34□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Prkg1P0C605 671 aa10.34□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Senp5Q6NXL6 749 aa10.34□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Nxf7Q80SZ6 620 aaKnown RBP10.34□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Scfd1Q8BRF7 639 aaKnown RBP10.34□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Gimap7Q8R379 293 aa10.34□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Lonrf3Q9D4H7 753 aa10.34□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Frmpd4A2AFR3 1320 aa10.34□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Thsd7bQ6P4U0 1607 aa10.34□□□□□ -0.75
Ccdc28a-201ENSMUST00000052648 Casq1O09165 405 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Ppp2r5bQ6PD28 497 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Ddx55Q6ZPL9 600 aaKnown RBP10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Tsr2Q8C8T8 191 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Calhm4Q8CE93 315 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Alg3Q8K2A8 438 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Arhgef6Q8K4I3 771 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Eid1Q9DCR4 169 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Wdr19Q3UGF1 1341 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 SynrgQ5SV85 1306 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 MycnP03966 462 aaKnown RBP10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Znf697Q569E7 569 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Eme2Q56A04 373 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Plcd3Q8K2J0 785 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 CsadQ9DBE0 493 aa10.33□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Irx3P81067 507 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 1700013D24RikQ0P521 120 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 St18Q80TY4 1045 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Ireb2Q811J3 963 aaKnown RBP10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Smc3Q9CW03 1217 aaKnown RBP10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Gm20425E9Q035 978 aaKnown RBP10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Has3O08650 554 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Mmp10O55123 476 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Cxcl9P18340 126 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 SrprbP47758 269 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 PgfP49764 158 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Cplx2P84086 134 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Garem2Q6PAJ3 880 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Kif1bpQ6ZPU9 617 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Prkab1Q9R078 270 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 S1pr4Q9Z0L1 386 aa10.32□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Foxp1P58462 705 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Limch1Q3UH68 1057 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Cdkl5Q3UTQ8 938 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Swap70Q6A028 585 aaKnown RBP10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Adgrg6Q6F3F9 1165 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Smarcc2Q6PDG5 1213 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Zfp341Q6PGC9 846 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Ccp110Q7TSH4 1004 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Sulf1Q8K007 870 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Rtn1Q8K0T0 780 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Stag2O35638 1231 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 LdhaP06151 332 aaKnown RBP10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Gprin1Q3UNH4 932 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Prr7Q3V0I2 269 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Sv2cQ69ZS6 727 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Haus6Q6NV99 933 aaKnown RBP10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Trpv1Q704Y3 839 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Lca5Q80ST9 704 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Riox2Q8CD15 465 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Gtf3c5Q8R2T8 520 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Gripap1Q8VD04 806 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Aox1O54754 1333 aa10.31□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 PtpraP18052 829 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Fgfr2P21803 821 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Ppfia3P60469 1194 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Babam1Q3UI43 333 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Tshz1Q5DTH5 1084 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Tbc1d5Q80XQ2 815 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Kiaa1524Q8BWY9 907 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Cep57l1Q8VDS7 400 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Tdrd1Q99MV1 1172 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Scn3aA2ASI5 1947 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Sall1Q9ER74 1322 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Gm30191A0A0U1RNT7 187 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 GnaqP21279 359 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Llgl2Q3TJ91 1027 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Ces3aQ63880 571 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Secisbp2lQ6A098 1086 aaKnown RBP10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Ms4a5Q810P8 197 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Zkscan1Q8BGS3 561 aaKnown RBP10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Ranbp6Q8BIV3 1105 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Triml1Q8BVP1 470 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Fam83aQ8K2P2 436 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Ces3bQ8VCU1 571 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Ubac1Q8VDI7 409 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Bloc1s2Q9CWG9 143 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Cep89Q9CZX2 791 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Dmrtc1Q9D9R7 182 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Gdpd2Q9ESM6 539 aa10.3□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Zfp804bA0A0G2JGH6 1343 aa10.29□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Rgs9O54828 675 aa10.29□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 ThbdP15306 577 aa10.29□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Yy1Q00899 414 aa10.29□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Sap30bpQ02614 308 aa10.29□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Nsrp1Q5NCR9 542 aa10.29□□□□□ -0.76
Ccdc28a-201ENSMUST00000052648 Nlgn2Q69ZK9 836 aa10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms