RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Lamc2Q61092 1191 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Naa30Q8CES0 364 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ivns1abpQ920Q8 642 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Kif1aP33173 1695 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Clrn2B2RVW2 232 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Psmc2P46471 433 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Kctd1Q5M956 257 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Zscan22Q8BGS5 496 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Mb21d2Q8C525 428 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 MypopQ8R4U1 393 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Acot11Q8VHQ9 594 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Fam84aQ9D650 292 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Gm1993A6X8I0 212 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 SlxD3Z347 212 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Vps18Q8R307 973 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Gpaa1Q9WTK3 621 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Usp53P15975 1069 aa13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Fermt1P59113 677 aa13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 NyxP83503 476 aa13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ctdp1Q7TSG2 960 aa13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Pramel6Q810Y9 485 aa13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Csrnp2Q8BGQ2 534 aa13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Hps6Q8BLY7 805 aa13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Tmem191cQ9JJB1 302 aa13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Rad51bO35719 350 aa13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 HdlbpQ8VDJ3 1268 aaKnown RBP13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Fkbp1aP26883 108 aaKnown RBP13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ctnna2Q61301 953 aa13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Atg9aQ68FE2 551 aa13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 EhhadhQ9DBM2 718 aa13.3□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Trpm1Q2TV84 1622 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ppm1mQ8BU27 406 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 NkapQ9D0F4 415 aaKnown RBP13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Glra4Q61603 456 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Bbs9Q811G0 885 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 NelfbQ8C4Y3 580 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ddx27Q921N6 760 aaKnown RBP13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Kcnq5Q9JK45 933 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Myl7Q9QVP4 175 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Rapgef1Q3UHC1 1224 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ces3aQ63880 571 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Slfnl1Q8BHW9 410 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 CnstQ8CBC4 711 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ces3bQ8VCU1 571 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Pcif1P59114 706 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Arhgef2Q60875 985 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Depdc1bQ8BH88 529 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Gle1Q8R322 699 aa13.29□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Esr2O08537 530 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Flot1O08917 428 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Zfp42P22227 288 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Gas7Q60780 421 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Herc4Q6PAV2 1057 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Camsap3Q80VC9 1252 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Rimbp3Q3V0F0 1606 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Il4rP16382 810 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Naa15Q80UM3 865 aaKnown RBP13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Zfp113Q8C689 439 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ccpg1Q640L3 753 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ccdc93Q7TQK5 629 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Cdk8Q8R3L8 464 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Akap2O54931 893 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Krt9Q6RHW0 743 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Krt87Q6IMF0 495 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Asic3Q6X1Y6 530 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Prpf40bQ80W14 870 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Traf3ip3Q8C0G2 513 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Pus7lQ8CE46 702 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Bmp2kQ91Z96 1138 aa13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Tnpo2Q99LG2 887 aaKnown RBP13.28□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Nr1i2O54915 431 aa13.27□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Krt18P05784 423 aa13.27□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Paxbp1P58501 919 aa13.27□□□□□ -0.28
Pcif1-201ENSMUST00000041643 LrmpQ60664 539 aa13.27□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Q9DAQ4 598 aa13.27□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Cyp2j7A0A140T8U1 504 aa13.27□□□□□ -0.28
Pcif1-201ENSMUST00000041643 IbspQ61711 324 aa13.27□□□□□ -0.28
Pcif1-201ENSMUST00000041643 LarsQ8BMJ2 1178 aa13.27□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Pdia6Q922R8 440 aaKnown RBP13.27□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Gtf2a1Q99PM3 378 aa13.27□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ccdc7Q9D541 371 aa13.27□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Col14a1Q80X19 1797 aa13.27□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Mageb2A2AHM0 380 aa13.27□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Pald1P70261 859 aa13.27□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Cwc15Q9JHS9 229 aaKnown RBP13.27□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Rsbn1lD3Z0K6 821 aa13.27□□□□□ -0.29
Pcif1-201ENSMUST00000041643 CrkQ64010 304 aa13.27□□□□□ -0.29
Pcif1-201ENSMUST00000041643 WaplQ65Z40 1200 aaKnown RBP13.27□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Appl2Q8K3G9 662 aa13.27□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Myom1Q62234 1667 aaKnown RBP13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Elmsan1E9Q2I4 1089 aaKnown RBP13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Wdr24Q8CFJ9 790 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Kctd10Q922M3 315 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Cd2bp2Q9CWK3 342 aaKnown RBP13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Smco2Q9DA21 347 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Cnpy3Q9DAU1 276 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Znf541Q0GGX2 1363 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Nrxn3Q6P9K9 1571 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Ctnna3Q65CL1 895 aa13.26□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Lin9Q8C735 542 aa13.26□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms