RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Plekha7Q3UIL6 1118 aaKnown RBP21.57■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Etnk1Q9D4V0 363 aa21.57■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 MetP16056 1379 aa21.57■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Cyp26c1B2RXA7 518 aa21.57■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Exoc3l2D3YUP5 789 aa21.57■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Pde4dQ01063 747 aa21.57■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Fam89aQ14BJ1 175 aa21.57■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Rrp1bQ91YK2 724 aaKnown RBP21.57■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 PdclQ9DBX2 301 aa21.57■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Myh3P13541 1940 aa21.56■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Snrpa1P57784 255 aaKnown RBP21.56■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 ItpripQ3TNL8 555 aa21.56■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Clic6Q8BHB9 596 aa21.56■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Smc1bQ920F6 1248 aa21.56■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 NapgQ9CWZ7 312 aa21.56■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Gtpbp6Q3U6U5 514 aa21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Olfr121Q5CZY0 321 aa21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 FntaQ61239 377 aa21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Glis3Q6XP49 780 aa21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Col20a1Q923P0 1320 aa21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Ankrd31A0A140LI88 1765 aa21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 GalcP54818 684 aa21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Cyp4x1Q6A152 507 aa21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Snd1Q78PY7 910 aaKnown RBP21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Larp6Q8BN59 492 aa21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Prpf3Q922U1 683 aaKnown RBP21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Tab2Q99K90 693 aa21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Tfcp2Q9ERA0 502 aa21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Egfl6Q9JJZ5 550 aa21.55■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Pde11aP0C1Q2 933 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Rfc1P35601 1131 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Lrriq3Q14DL3 633 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Gucy2cQ3UWA6 1072 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Tacc1Q6Y685 774 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Q8C1R3 189 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Abhd2Q9QXM0 425 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Arhgap33Q80YF9 1305 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Phldb3E9QAF4 648 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Ubap1lG3UW59 384 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Il7P10168 154 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Krt222Q8CCX5 294 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Trim29Q8R2Q0 587 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Klc3Q91W40 508 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 GdaQ9R111 454 aa21.54■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Calm1P0DP26 149 aaKnown RBP21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Calm2P0DP27 149 aaKnown RBP21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Calm3P0DP28 149 aaKnown RBP21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Sec23aQ01405 765 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Cct6bQ61390 531 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Ccdc57Q6PHN1 1016 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Apol10aQ8CCA5 318 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Ccdc73Q8CDM4 1066 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Thap2Q9D305 217 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Pik3ap1Q9EQ32 811 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Gm21969J3QJZ1 289 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 ItgadQ3V0T4 1168 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Ulk4Q3V129 1303 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Fam170aQ66LM6 333 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Prdm4Q80V63 803 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Jmjd4Q8BFT6 427 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Cep85Q8BMK0 761 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Caps2Q8BUG5 550 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Ttc12Q8BW49 704 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Rbm28Q8CGC6 750 aaKnown RBP21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Tcp11l2Q8K1H7 517 aa21.53■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Atp1a2Q6PIE5 1020 aa21.52■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Rasal3Q8C2K5 1041 aa21.52■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Taf6lQ8R2K4 616 aa21.52■■□□□ 1.04
Ccdc50-201ENSMUST00000039443 Sun3Q5SS91 320 aa21.51■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Q66JV7 365 aa21.51■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Hpcal4Q8BGZ1 191 aa21.51■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Pold4Q9CWP8 107 aa21.51■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Kif23E9Q5G3 953 aa21.51■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 GpiP06745 558 aaKnown RBP21.51■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Hdac4Q6NZM9 1076 aa21.51■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Ufl1Q8CCJ3 793 aaKnown RBP21.51■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Prc1Q99K43 603 aaKnown RBP21.51■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Myh13B1AR69 1938 aa21.51■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Scgb2b18A0A087WPA9 112 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Scgb2b19J3QM75 112 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Api5O35841 504 aaKnown RBP21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Sema3fO88632 785 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Prl7d1P04769 244 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 LtbrP50284 415 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Ano9P86044 747 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 MmeQ61391 750 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Mrps31Q61733 384 aaKnown RBP21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Olfr118Q7TRJ6 321 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Nek5Q7TSC3 627 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Ube3cQ80U95 1083 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Slc20a2Q80UP8 656 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Fam161bQ8CB59 589 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 4931408C20RikE9PWP9 1381 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Cnbd1B1AWM0 430 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Rexo5D3YW29 759 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Pak1O88643 545 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Tnni2P13412 182 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Trappc10Q3TLI0 1259 aa21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 HdlbpQ8VDJ3 1268 aaKnown RBP21.5■■□□□ 1.03
Ccdc50-201ENSMUST00000039443 Pcdha12Q91Y18 950 aa21.5■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms