RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Stag1Q9D3E6 1258 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ccdc91Q9D8L5 442 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Tacc3Q9JJ11 631 aa11.48□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gm2030D3Z7C4 212 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gm5169Q5M8P2 212 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ift20Q61025 132 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Fkbp3Q62446 224 aaKnown RBP11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 4930407I10RikD3Z5T8 1512 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gpr161B2RPY5 545 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gm10110D3Z5M2 615 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Pald1P70261 859 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Rapgef1Q3UHC1 1224 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Herc4Q6PAV2 1057 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ppp2r2cQ8BG02 447 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Zbtb1Q91VL9 713 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 HibadhQ99L13 335 aaKnown RBP11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Svs3aF2Z472 265 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Map3k12Q60700 888 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Arhgef2Q60875 985 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ublcp1Q8BGR9 318 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Pdlim2Q8R1G6 349 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Add3Q9QYB5 706 aaKnown RBP11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Prr5lA2AVJ5 370 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Sept1P42209 366 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Lonrf3Q9D4H7 753 aa11.47□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Carmil3Q3UFQ8 1375 aa11.46□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Tldc2A2ACG1 198 aa11.46□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Cd22P35329 862 aa11.46□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Spata18Q0P557 537 aa11.46□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Hgh1Q8C3I8 393 aa11.46□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gm44503E9PYU5 387 aa11.46□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Pde6aP27664 859 aa11.46□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Nup58Q8R332 587 aa11.46□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ercc6l2Q9JIM3 1537 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Rad51bO35719 350 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 GabrdP22933 449 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Dnm2P39054 870 aaKnown RBP11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Lrrc36Q3V0M2 755 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Cep170bQ80U49 1574 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 CutaQ9CQ89 177 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Cd2bp2Q9CWK3 342 aaKnown RBP11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 U2af2P26369 475 aaKnown RBP11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Kiaa1468Q148V7 1216 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Nlrx1Q3TL44 975 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Gys2Q8VCB3 704 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Prpf3Q922U1 683 aaKnown RBP11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Psrc1Q9D0P7 329 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Arpp21Q9DCB4 807 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Krt7Q9DCV7 457 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 MypnQ5DTJ9 1315 aa11.46□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Krit1Q6S5J6 736 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ccdc28aQ8CEI3 192 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Pcdha7Q91Y13 937 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Fsip1Q9D3V5 435 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Gm9992B2RWK3 458 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Rnf216P58283 853 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Tbc1d9bQ5SVR0 1263 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Unc93aQ710D3 458 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Armcx3Q8BHS6 379 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Mfap3Q922T2 349 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Serpinb12Q9D7P9 423 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Dnajc21E9Q8D0 531 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Neurog2P70447 263 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Pla2g4eQ50L42 875 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Eme2Q56A04 373 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Arhgef18Q6P9R4 1021 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Rps6ka5Q8C050 863 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Rbm33Q9CXK9 1231 aaKnown RBP11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Myo3bQ1EG27 1305 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Sap30bpQ02614 308 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 AsnsQ61024 561 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Usp44Q8C2S0 711 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Pcdha12Q91Y18 950 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Mx2Q9WVP9 655 aa11.45□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Cyp2j7A0A140T8U1 504 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Tex13cD3YU32 604 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Eif6O55135 245 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Fam178bQ24JP3 464 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 LrmpQ60664 539 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 GnptabQ69ZN6 1235 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Krt87Q6IMF0 495 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ddx31Q6NZQ2 687 aaKnown RBP11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Mb21d2Q8C525 428 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ushbp1Q8R370 680 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Dpf1Q9QX66 387 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Stk39Q9Z1W9 556 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 CltcQ68FD5 1675 aaKnown RBP11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Krt13P08730 437 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ccdc129Q14B48 1034 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Oxsr1Q6P9R2 527 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Nucks1Q80XU3 234 aaKnown RBP11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Enox1Q8BHR2 643 aaKnown RBP11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Zfp317Q8C0Q5 607 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Sar1bQ9CQC9 198 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Eef1gQ9D8N0 437 aaKnown RBP11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Dzip1lQ499E4 774 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Ubxn10Q8BG34 277 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Rbm41Q8JZV4 413 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 Fam114a1Q9D281 569 aa11.44□□□□□ -0.58
Ccdc40-201ENSMUST00000035935 EhhadhQ9DBM2 718 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 46.4 ms