RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Tsga10Q6NY15 697 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Clec16aQ80U30 1036 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 AdarQ99MU3 1178 aaKnown RBP12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Filip1Q9CS72 1211 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ccdc105Q9D4K7 499 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Plekho1Q9JIY0 408 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ppfia4B8QI36 1187 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ankrd35E9Q9D8 996 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Speer4dL7N216 212 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Arhgef16Q3U5C8 713 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Slc20a2Q80UP8 656 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Cep85Q8BMK0 761 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Atp1a1Q8VDN2 1023 aaKnown RBP12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 NsmfQ99NF2 532 aa12.69□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Gm1993A6X8I0 212 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 SlxD3Z347 212 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Meis3P97368 378 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Kctd16Q5DTY9 427 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 FntaQ61239 377 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ano8Q6PB70 1060 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 LpxnQ99N69 386 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ehd4Q9EQP2 541 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Dnai2A2AC93 623 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Rsrc2A2RTL5 376 aaKnown RBP12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Mcm5P49718 733 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Wdr70Q3TWF6 657 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 GphnQ8BUV3 769 aaKnown RBP12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Kif20bQ80WE4 1774 aaKnown RBP12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Myo3bQ1EG27 1305 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Chd4Q6PDQ2 1915 aaKnown RBP12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Slc12a2P55012 1205 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Islr2Q5RKR3 745 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 BbxQ8VBW5 907 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 PdhbQ9D051 359 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Galntl5Q9D4M9 431 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ppp1r21Q3TDD9 780 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Klhl7Q8BUL5 586 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Smco2Q9DA21 347 aa12.68□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Gja3Q64448 417 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Arpp21Q9DCB4 807 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Abca17E9PX95 1733 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 LtbrP50284 415 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 1700013D24RikQ0P521 120 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Mybpc2Q5XKE0 1136 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Kdm1aQ6ZQ88 853 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Otop3Q80UF9 577 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Rassf2Q8BMS9 326 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Cgref1Q8R1U2 281 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ltb4r2Q9JJL9 360 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Tcp10bE9PYJ0 438 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Zfp781Q0P5U5 243 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 HelqQ2VPA6 1069 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Irak1Q62406 710 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 SyncQ9EPM5 470 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Sik3Q6P4S6 1311 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Tubb4bP68372 445 aaKnown RBP12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Map10Q8BJS7 891 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Abcc12Q80WJ6 1366 aa12.67□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Tbc1d2bQ3U0J8 965 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Slf2Q6P9P0 1278 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Fchsd1Q6PFY1 688 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Dbndd2Q9CRD4 158 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Setdb1O88974 1307 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 MthfslL7N466 203 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ric8aQ3TIR3 530 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Cc2d1bQ8BRN9 848 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Spice1Q8C804 860 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Taf6lQ8R2K4 616 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Hexim1Q8R409 356 aaKnown RBP12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ssr1Q9CY50 286 aaKnown RBP12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Txnrd1Q9JMH6 613 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Nek3Q9R0A5 511 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Dctn1O08788 1281 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Slc7a1Q09143 622 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Sptlc3Q8BG54 563 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Rab11fip4Q8BQP8 635 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Rasgrp4Q8BTM9 673 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ddx54Q8K4L0 874 aaKnown RBP12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Cnpy3Q9DAU1 276 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Kdm6aO70546 1401 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Cyp3a59D3Z2W7 503 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Nfil3O08750 462 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Cyp24a1Q64441 514 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Edrf1Q6GQV7 1239 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Tas2r124Q7M718 309 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 GopcQ8BH60 463 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Uap1Q91YN5 522 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Akap12Q9WTQ5 1684 aa12.66□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Acad12D3Z7X0 555 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Kctd19Q562E2 927 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 EsrrbQ61539 433 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Tubb2aQ7TMM9 445 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Rassf10Q8BL43 508 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Trerf1Q8BXJ2 1205 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Synpo2Q91YE8 1087 aaKnown RBP12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Tubb2bQ9CWF2 445 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Rapgef4Q9EQZ6 1011 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Traf3ip1Q149C2 625 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Ncoa4Q5U4H9 625 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 RragaQ80X95 313 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms