RNA–Protein interactions for RNA: ENSMUST00000022744.3

Gdnf-201, Transcript of Glial cell line-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Gdnf, Length 3,509 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gdnf-201ENSMUST00000022744 Snx13Q6PHS6 957 aa10.59□□□□□ -0.71
Gdnf-201ENSMUST00000022744 Tmx3Q8BXZ1 456 aa10.59□□□□□ -0.71
Gdnf-201ENSMUST00000022744 Sh3bgrQ9WUZ7 214 aa10.59□□□□□ -0.71
Gdnf-201ENSMUST00000022744 PicalmQ7M6Y3 660 aaKnown RBP10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Ttc8Q8VD72 515 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Akap8Q9DBR0 687 aaKnown RBP10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 StrcQ8VIM6 1809 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Col22a1E9Q7P1 1613 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Sema3fO88632 785 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Tfcp2l1Q3UNW5 479 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Slc27a1Q60714 646 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Ift122Q6NWV3 1182 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Saal1Q9D2C2 474 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Ubxn8Q9QZ49 277 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Dcdc2bF7BCK0 340 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Hap1O35668 628 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 CnpP16330 420 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Cap1P40124 474 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Myo19Q5SV80 963 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Gm2163Q6PCY5 473 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Smarcc2Q6PDG5 1213 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Tbc1d5Q80XQ2 815 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Plcd1Q8R3B1 756 aa10.58□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Ecm29Q6PDI5 1840 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Glt1d1A4FUP9 346 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 MthfslL7N466 203 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Tpd52l1O54818 204 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Rrp12Q6P5B0 1295 aaKnown RBP10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Erich6bQ9D4S6 220 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Borcs6Q9D6W8 360 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Vmn2r68L7N2B3 851 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Cnksr2Q80YA9 1032 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 OplahQ8K010 1288 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Gripap1Q8VD04 806 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Acot9Q9R0X4 439 aaKnown RBP10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Ly6iQ9WU67 134 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Vcam1P29533 739 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Hoxa13Q62424 386 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Slc18a1Q8R090 521 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Ces1Q8VCC2 565 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Srgap1Q91Z69 1062 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Tjap1Q9DCD5 539 aa10.57□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Scn9aQ62205 1984 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 AfdnQ9QZQ1 1820 aaKnown RBP10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Wdr93Q402B2 695 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Jakmip3Q5DTN8 844 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Cdc45Q9Z1X9 566 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Tal1P22091 329 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Kif4P33174 1231 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Mars2Q499X9 586 aaKnown RBP10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Pex1Q5BL07 1284 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Krt82Q99M74 516 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Iqca1Q9CUL5 857 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Mei1Q9D4I2 1268 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 4931400O07RikQ9D4M5 137 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 4921524L21RikQ9D5T2 438 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Tsc2Q61037 1814 aa10.56□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Rgs12Q8CGE9 1381 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Mageb2A2AHM0 380 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 CfhP06909 1234 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Epha2Q03145 977 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Esyt2Q3TZZ7 845 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Usp17leQ7M764 540 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 R3hcc1Q8BSI6 488 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Pla2g12bQ99P27 195 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Chd1lQ9CXF7 900 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Smchd1Q6P5D8 2007 aaKnown RBP10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 A0A0U1RNP2 1173 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 1700006A11RikB9EHI3 544 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Tmem132bF7BAB2 1078 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Slc39a2G3X943 309 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Pde4aO89084 844 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Mettl5Q8K1A0 209 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Kiaa1024Q8K3V7 917 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Zbed3Q9D0L1 228 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Kcnq2Q9Z351 759 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Aox1O54754 1333 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Flt1P35969 1333 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Pnpla6Q3TRM4 1355 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Dnajc25A2ALW5 357 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Zscan18E9PUD6 809 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Hoxa7P02830 229 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Mx1P09922 631 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Traf3ip1Q149C2 625 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Lgr6Q3UVD5 967 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Prl2c1Q5SVL9 228 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Gga3Q8BMI3 718 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Usp33Q8R5K2 909 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Trim59Q922Y2 403 aa10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Mrvi1Q9WUX5 899 aaKnown RBP10.55□□□□□ -0.72
Gdnf-201ENSMUST00000022744 CpdO89001 1377 aa10.54□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Oog3Q3UWY1 500 aa10.54□□□□□ -0.72
Gdnf-201ENSMUST00000022744 IgflQ6B9Z0 140 aa10.54□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Bbs9Q811G0 885 aa10.54□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Zscan22Q8BGS5 496 aa10.54□□□□□ -0.72
Gdnf-201ENSMUST00000022744 FktnQ8R507 461 aa10.54□□□□□ -0.72
Gdnf-201ENSMUST00000022744 TnmdQ9EP64 317 aa10.54□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Tob2Q9JM55 345 aa10.54□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Prss51A0A286YDY8 319 aa10.54□□□□□ -0.72
Gdnf-201ENSMUST00000022744 Lilrb3P97484 841 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms