RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Myl7Q9QVP4 175 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Gm45140A0A0N4SUM8 220 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Eddm13E9Q7F5 164 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Eya2O08575 532 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Eftud2O08810 971 aaKnown RBP9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Ier5O89113 308 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Cetn3O35648 167 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Ift20Q61025 132 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Svs3bQ8BZH8 265 aa9.15□□□□□ -0.94
Ssr1-201ENSMUST00000021864 Prl3d3A0A0M6L0J6 224 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 C1qbpO35658 278 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Mcm5P49718 733 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Spata18Q0P557 537 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Ccdc174Q3U155 467 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Tbc1d31Q6NXY1 996 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Cct8l1Q80YT3 562 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Samd15F6XZJ7 620 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Vti1aO89116 217 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Ppfia3P60469 1194 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Tbc1d9bQ5SVR0 1263 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Rapgef5Q8C0Q9 814 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 9230110C19RikQ8CC70 267 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Stx12Q9ER00 274 aa9.15□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Pa2g4P50580 394 aaKnown RBP9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Rab3gap1Q80UJ7 981 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Kif2cQ922S8 721 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Abcc4E9Q236 1325 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Prpf40bQ80W14 870 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Rabep2Q91WG2 554 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Gm28047Q3US59 414 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Dzip3Q7TPV2 1204 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Pcdhb22Q91XZ8 794 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Ak2Q9WTP6 239 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Tpx2A2APB8 745 aaKnown RBP9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Kif23E9Q5G3 953 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Flot1O08917 428 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Stk10O55098 966 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Ifit2Q64112 472 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Ces5aQ6AW46 575 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Prr16A3KMN5 304 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Dnajc21E9Q8D0 531 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 PpardP35396 440 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Lrrc36Q3V0M2 755 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Ccdc82Q6PG04 518 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Rassf4Q8CB96 322 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Tsnaxip1Q99P25 704 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 RilpQ5ND29 369 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Retreg2Q6NS82 541 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Aldh1l2Q8K009 923 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Cul4bA2A432 970 aaKnown RBP9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Magea6O89010 325 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Trim27Q62158 513 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Zbtb40Q6PCS8 1258 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Magea3Q6T340 320 aa9.14□□□□□ -0.95
Ssr1-201ENSMUST00000021864 CaluO35887 315 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 FanccP50652 591 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Pex1Q5BL07 1284 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Krt9Q6RHW0 743 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Spata16Q8C636 571 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Prr5lA2AVJ5 370 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 TsksO54887 585 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Map3k12Q60700 888 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Zrsr1Q64707 428 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Snx13Q6PHS6 957 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Ankrd45Q810N6 248 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Slc4a7Q8BTY2 1034 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Calcoco1Q8CGU1 691 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Gdf11Q9Z1W4 405 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Slx1bQ8BX32 270 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 SncbQ91ZZ3 133 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Zbtb16Q3UQ17 673 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Kiaa1841Q68FF0 718 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Gbp9Q8BTS3 619 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Akap8Q9DBR0 687 aaKnown RBP9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 PigbQ9JJQ0 542 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Ice2Q3UZ18 988 aaKnown RBP9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Tmem119Q8R138 280 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Adarb2Q9JI20 745 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Usp19Q3UJD6 1360 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 CemipQ8BI06 1361 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Il15P48346 162 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Ncoa7Q6DFV7 943 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Q8R1Y2 203 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Cyp2c68K7N6C2 491 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 ErmnQ5EBJ4 281 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Riox2Q8CD15 465 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Atg3Q9CPX6 314 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 4933428M09RikQ9D3X3 192 aa9.13□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Prex1Q69ZK0 1650 aa9.12□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Lrriq3Q14DL3 633 aa9.12□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Nrbp2Q91V36 499 aa9.12□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Tecpr2Q3UH45 1423 aa9.12□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Bcl9Q9D219 1425 aa9.12□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Sult6b1P0CC03 303 aa9.12□□□□□ -0.95
Ssr1-201ENSMUST00000021864 PhbP67778 272 aaKnown RBP9.12□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Mum1l1Q4VA55 681 aa9.12□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Crybg3Q80W49 1005 aa9.12□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Ankfy1Q810B6 1169 aa9.12□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Tmtc4Q8BG19 741 aa9.12□□□□□ -0.95
Ssr1-201ENSMUST00000021864 Gm4297D3YWB7 211 aa9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms