RNA–Protein interactions for RNA: ENSMUST00000186545.1

Trav17-202, Transcript of T cell receptor alpha variable 17 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav17, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17-202ENSMUST00000186545 Gm10999F6Q4M4 69 aa0.97□□□□□ -2.25
Trav17-202ENSMUST00000186545 Vps13dB1ART2 4390 aa0.96□□□□□ -2.26
Trav17-202ENSMUST00000186545 Gm7735D3YX18 52 aa0.96□□□□□ -2.26
Trav17-202ENSMUST00000186545 Defb38Q7TNV7 63 aa0.96□□□□□ -2.26
Trav17-202ENSMUST00000186545 Dnah3Q8BW94 4083 aa0.95□□□□□ -2.26
Trav17-202ENSMUST00000186545 Gm9789Q8BIG3 52 aa0.95□□□□□ -2.26
Trav17-202ENSMUST00000186545 Kmt2aP55200 3966 aa0.94□□□□□ -2.26
Trav17-202ENSMUST00000186545 Dync1h1Q9JHU4 4644 aaKnown RBP0.94□□□□□ -2.26
Trav17-202ENSMUST00000186545 Herc2Q4U2R1 4836 aa0.94□□□□□ -2.26
Trav17-202ENSMUST00000186545 Dnah9B1AR51 4484 aa0.94□□□□□ -2.26
Trav17-202ENSMUST00000186545 Csmd3Q80T79 3707 aa0.94□□□□□ -2.26
Trav17-202ENSMUST00000186545 Dnah2P0C6F1 4456 aa0.93□□□□□ -2.26
Trav17-202ENSMUST00000186545 Dnah8Q91XQ0 4731 aa0.93□□□□□ -2.26
Trav17-202ENSMUST00000186545 Dnah1E9Q8T7 4250 aa0.93□□□□□ -2.26
Trav17-202ENSMUST00000186545 Gm19426M0QWC7 77 aa0.93□□□□□ -2.26
Trav17-202ENSMUST00000186545 Sprr2dO70555 85 aa0.93□□□□□ -2.26
Trav17-202ENSMUST00000186545 HrnrQ8VHD8 2496 aa0.93□□□□□ -2.26
Trav17-202ENSMUST00000186545 SacsQ9JLC8 4582 aa0.93□□□□□ -2.26
Trav17-202ENSMUST00000186545 Fat1A0A1L1SQU7 4645 aa0.92□□□□□ -2.26
Trav17-202ENSMUST00000186545 Dnah5Q8VHE6 4621 aa0.92□□□□□ -2.26
Trav17-202ENSMUST00000186545 Fras1Q80T14 4010 aa0.92□□□□□ -2.26
Trav17-202ENSMUST00000186545 Dnah7bL7N1Y0 4068 aa0.92□□□□□ -2.26
Trav17-202ENSMUST00000186545 Dnah7aE9Q0T8 4024 aa0.92□□□□□ -2.26
Trav17-202ENSMUST00000186545 Abca13Q5SSE9 5034 aa0.92□□□□□ -2.26
Trav17-202ENSMUST00000186545 Dnah7cA0A087WR13 4024 aa0.92□□□□□ -2.26
Trav17-202ENSMUST00000186545 Birc6O88738 4882 aa0.92□□□□□ -2.26
Trav17-202ENSMUST00000186545 Dnah11E9Q7N9 4488 aa0.91□□□□□ -2.26
Trav17-202ENSMUST00000186545 Defb1P56386 69 aa0.91□□□□□ -2.26
Trav17-202ENSMUST00000186545 SspoQ8CG65 4998 aa0.9□□□□□ -2.26
Trav17-202ENSMUST00000186545 Muc19Q6PZE0 7524 aa0.9□□□□□ -2.26
Trav17-202ENSMUST00000186545 HydinQ80W93 5154 aa0.9□□□□□ -2.27
Trav17-202ENSMUST00000186545 BC029722A0A0N4SW31 51 aa0.9□□□□□ -2.27
Trav17-202ENSMUST00000186545 Krtap19-4Q925H7 84 aa0.9□□□□□ -2.27
Trav17-202ENSMUST00000186545 ApobE9Q414 4505 aa0.89□□□□□ -2.27
Trav17-202ENSMUST00000186545 Fat3Q8BNA6 4555 aa0.89□□□□□ -2.27
Trav17-202ENSMUST00000186545 Dnhd1D3Z2X2 4750 aa0.88□□□□□ -2.27
Trav17-202ENSMUST00000186545 Kmt2cQ8BRH4 4903 aa0.88□□□□□ -2.27
Trav17-202ENSMUST00000186545 Lrp1bQ9JI18 4599 aa0.88□□□□□ -2.27
Trav17-202ENSMUST00000186545 Pkhd1E9PZ36 4059 aa0.87□□□□□ -2.27
Trav17-202ENSMUST00000186545 Fat2Q5F226 4351 aa0.87□□□□□ -2.27
Trav17-202ENSMUST00000186545 Herc1E9PZP8 4859 aa0.86□□□□□ -2.27
Trav17-202ENSMUST00000186545 Lrp2A2ARV4 4660 aa0.86□□□□□ -2.27
Trav17-202ENSMUST00000186545 Pkhd1l1Q80ZA4 4249 aa0.86□□□□□ -2.27
Trav17-202ENSMUST00000186545 Mycbp2Q7TPH6 4711 aa0.86□□□□□ -2.27
Trav17-202ENSMUST00000186545 Ush2AQ2QI47 5193 aa0.85□□□□□ -2.27
Trav17-202ENSMUST00000186545 Lrp1Q91ZX7 4545 aaKnown RBP0.85□□□□□ -2.27
Trav17-202ENSMUST00000186545 Gm10061D3Z714 54 aa0.85□□□□□ -2.27
Trav17-202ENSMUST00000186545 Tnp1P10856 55 aa0.85□□□□□ -2.27
Trav17-202ENSMUST00000186545 Hectd4E9Q2E4 4418 aa0.84□□□□□ -2.27
Trav17-202ENSMUST00000186545 Krtap19-1Q925H2 87 aa0.84□□□□□ -2.27
Trav17-202ENSMUST00000186545 Vps13bQ80TY5 3993 aa0.82□□□□□ -2.28
Trav17-202ENSMUST00000186545 Hmcn2A2AJ76 5100 aa0.82□□□□□ -2.28
Trav17-202ENSMUST00000186545 Krtap19-9aF8WH65 55 aa0.81□□□□□ -2.28
Trav17-202ENSMUST00000186545 Sprr2kO70562 68 aa0.8□□□□□ -2.28
Trav17-202ENSMUST00000186545 Gm17402F6Z0L5 76 aa0.79□□□□□ -2.28
Trav17-202ENSMUST00000186545 Krtap8-1O08633 61 aa0.79□□□□□ -2.28
Trav17-202ENSMUST00000186545 ZanO88799 5376 aa0.78□□□□□ -2.29
Trav17-202ENSMUST00000186545 Rnf213E9Q555 5152 aaKnown RBP0.77□□□□□ -2.29
Trav17-202ENSMUST00000186545 Fat4Q2PZL6 4981 aa0.77□□□□□ -2.29
Trav17-202ENSMUST00000186545 Hmcn1D3YXG0 5634 aa0.76□□□□□ -2.29
Trav17-202ENSMUST00000186545 Sprr2gO70558 76 aa0.76□□□□□ -2.29
Trav17-202ENSMUST00000186545 Gm6358A0A087WPH4 74 aa0.75□□□□□ -2.29
Trav17-202ENSMUST00000186545 Gm11938Q9D3H4 131 aa0.75□□□□□ -2.29
Trav17-202ENSMUST00000186545 Mdn1A2ANY6 5589 aaKnown RBP0.74□□□□□ -2.29
Trav17-202ENSMUST00000186545 Mt4P47945 62 aa0.74□□□□□ -2.29
Trav17-202ENSMUST00000186545 Mt2P02798 61 aa0.73□□□□□ -2.29
Trav17-202ENSMUST00000186545 Sprr2eO70556 76 aa0.72□□□□□ -2.29
Trav17-202ENSMUST00000186545 Krtap22-2J3QNX6 67 aa0.71□□□□□ -2.3
Trav17-202ENSMUST00000186545 Krtap19-9bQ99NG9 58 aa0.71□□□□□ -2.3
Trav17-202ENSMUST00000186545 Krtap6-3A0A087WQL6 57 aa0.7□□□□□ -2.3
Trav17-202ENSMUST00000186545 AhnakE9Q616 5656 aaKnown RBP0.68□□□□□ -2.3
Trav17-202ENSMUST00000186545 Muc5bE9Q5I3 4800 aa0.67□□□□□ -2.3
Trav17-202ENSMUST00000186545 ObscnA2AAJ9 8891 aaKnown RBP0.66□□□□□ -2.3
Trav17-202ENSMUST00000186545 Krtap20-2E9Q0A8 60 aa0.63□□□□□ -2.31
Trav17-202ENSMUST00000186545 Sprr2hO70559 108 aa0.58□□□□□ -2.32
Trav17-202ENSMUST00000186545 Mt1P02802 61 aaKnown RBP0.54□□□□□ -2.32
Trav17-202ENSMUST00000186545 Syne1Q6ZWR6 8799 aa0.44□□□□□ -2.34
Trav17-202ENSMUST00000186545 Sprr2bO70554 98 aa0.44□□□□□ -2.34
Trav17-202ENSMUST00000186545 Muc16A0A140LJ72 8478 aa0.37□□□□□ -2.35
Trav17-202ENSMUST00000186545 Phgr1Q8K0G7 91 aa0.31□□□□□ -2.36
Retrieved 80 of 22,080 RNA–protein pairs in 6.1 ms