RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Tnp1P10856 55 aa4.64□□□□□ -1.67
Ldlr-202ENSMUST00000213114 Hectd4E9Q2E4 4418 aa4.64□□□□□ -1.67
Ldlr-202ENSMUST00000213114 Crct1Q6PAI5 102 aa4.61□□□□□ -1.67
Ldlr-202ENSMUST00000213114 Stard9Q80TF6 4561 aa4.58□□□□□ -1.68
Ldlr-202ENSMUST00000213114 Ryr1E9PZQ0 5035 aa4.58□□□□□ -1.68
Ldlr-202ENSMUST00000213114 Krtap13-1Q8K198 168 aa4.55□□□□□ -1.68
Ldlr-202ENSMUST00000213114 Vps13bQ80TY5 3993 aa4.55□□□□□ -1.68
Ldlr-202ENSMUST00000213114 Krtap3-1A2A591 98 aa4.53□□□□□ -1.68
Ldlr-202ENSMUST00000213114 Dync1h1Q9JHU4 4644 aaKnown RBP4.53□□□□□ -1.68
Ldlr-202ENSMUST00000213114 Fat1A0A1L1SQU7 4645 aa4.52□□□□□ -1.69
Ldlr-202ENSMUST00000213114 Ryr2E9Q401 4966 aaKnown RBP4.51□□□□□ -1.69
Ldlr-202ENSMUST00000213114 Lrp1bQ9JI18 4599 aa4.51□□□□□ -1.69
Ldlr-202ENSMUST00000213114 Fat2Q5F226 4351 aa4.5□□□□□ -1.69
Ldlr-202ENSMUST00000213114 Ryr3A2AGL3 4863 aa4.47□□□□□ -1.69
Ldlr-202ENSMUST00000213114 SacsQ9JLC8 4582 aa4.46□□□□□ -1.7
Ldlr-202ENSMUST00000213114 Gm17402F6Z0L5 76 aa4.45□□□□□ -1.7
Ldlr-202ENSMUST00000213114 Kmt2cQ8BRH4 4903 aa4.41□□□□□ -1.7
Ldlr-202ENSMUST00000213114 Mycbp2Q7TPH6 4711 aa4.37□□□□□ -1.71
Ldlr-202ENSMUST00000213114 HydinQ80W93 5154 aa4.37□□□□□ -1.71
Ldlr-202ENSMUST00000213114 Lrp1Q91ZX7 4545 aaKnown RBP4.33□□□□□ -1.72
Ldlr-202ENSMUST00000213114 Gm19668J3QMD1 248 aa4.28□□□□□ -1.72
Ldlr-202ENSMUST00000213114 Fat3Q8BNA6 4555 aa4.28□□□□□ -1.72
Ldlr-202ENSMUST00000213114 Kiaa1109A2AAE1 5005 aa4.28□□□□□ -1.72
Ldlr-202ENSMUST00000213114 Dnah8Q91XQ0 4731 aa4.27□□□□□ -1.73
Ldlr-202ENSMUST00000213114 Herc2Q4U2R1 4836 aa4.23□□□□□ -1.73
Ldlr-202ENSMUST00000213114 Krtap1-5A2A590 122 aa4.22□□□□□ -1.73
Ldlr-202ENSMUST00000213114 Gm18596A0A1W2P860 280 aa4.22□□□□□ -1.73
Ldlr-202ENSMUST00000213114 Dnhd1D3Z2X2 4750 aa4.21□□□□□ -1.74
Ldlr-202ENSMUST00000213114 Lrp2A2ARV4 4660 aa4.2□□□□□ -1.74
Ldlr-202ENSMUST00000213114 LorP18165 486 aa4.17□□□□□ -1.74
Ldlr-202ENSMUST00000213114 Sprr2a3Q4KL71 83 aa4.14□□□□□ -1.75
Ldlr-202ENSMUST00000213114 Sprr2a1Q9CQK8 83 aa4.14□□□□□ -1.75
Ldlr-202ENSMUST00000213114 Abca13Q5SSE9 5034 aa4.14□□□□□ -1.75
Ldlr-202ENSMUST00000213114 Krtap7-1Q9D3I6 87 aa4.14□□□□□ -1.75
Ldlr-202ENSMUST00000213114 Birc6O88738 4882 aa4.14□□□□□ -1.75
Ldlr-202ENSMUST00000213114 Lce1mQ9CR91 182 aa4.13□□□□□ -1.75
Ldlr-202ENSMUST00000213114 Gm19402J3QJV4 266 aa4.12□□□□□ -1.75
Ldlr-202ENSMUST00000213114 Krtap1-4Q3V2D6 188 aa4.08□□□□□ -1.76
Ldlr-202ENSMUST00000213114 4933428G20RikQ9D3X4 101 aa4.07□□□□□ -1.76
Ldlr-202ENSMUST00000213114 Krtap19-9aF8WH65 55 aa4.01□□□□□ -1.77
Ldlr-202ENSMUST00000213114 Krtap16-3Q8C1I6 86 aa3.99□□□□□ -1.77
Ldlr-202ENSMUST00000213114 Krtap12-1Q9Z287 130 aa3.95□□□□□ -1.78
Ldlr-202ENSMUST00000213114 Krtap19-3Q925H6 87 aa3.94□□□□□ -1.78
Ldlr-202ENSMUST00000213114 Prm1P02319 51 aa3.9□□□□□ -1.78
Ldlr-202ENSMUST00000213114 Krtap19-1Q925H2 87 aa3.9□□□□□ -1.79
Ldlr-202ENSMUST00000213114 PcloQ9QYX7 5068 aa3.86□□□□□ -1.79
Ldlr-202ENSMUST00000213114 Gm6358A0A087WPH4 74 aa3.86□□□□□ -1.79
Ldlr-202ENSMUST00000213114 Krtap8-1O08633 61 aa3.84□□□□□ -1.79
Ldlr-202ENSMUST00000213114 Krtap19-9bQ99NG9 58 aa3.82□□□□□ -1.8
Ldlr-202ENSMUST00000213114 Gm7735D3YX18 52 aa3.82□□□□□ -1.8
Ldlr-202ENSMUST00000213114 Herc1E9PZP8 4859 aa3.8□□□□□ -1.8
Ldlr-202ENSMUST00000213114 Gm9789Q8BIG3 52 aa3.79□□□□□ -1.8
Ldlr-202ENSMUST00000213114 Ubr4A2AN08 5180 aa3.78□□□□□ -1.8
Ldlr-202ENSMUST00000213114 Krtap9-5A2A5X3 358 aa3.75□□□□□ -1.81
Ldlr-202ENSMUST00000213114 Krtap1-3A2A588 173 aa3.72□□□□□ -1.81
Ldlr-202ENSMUST00000213114 Mdn1A2ANY6 5589 aaKnown RBP3.72□□□□□ -1.81
Ldlr-202ENSMUST00000213114 Lce1jD3YUU5 139 aa3.69□□□□□ -1.82
Ldlr-202ENSMUST00000213114 Sprr2kO70562 68 aa3.67□□□□□ -1.82
Ldlr-202ENSMUST00000213114 Hmcn2A2AJ76 5100 aa3.67□□□□□ -1.82
Ldlr-202ENSMUST00000213114 4932415D10RikA0A1W2P6U8 4986 aa3.62□□□□□ -1.83
Ldlr-202ENSMUST00000213114 Ush2AQ2QI47 5193 aa3.61□□□□□ -1.83
Ldlr-202ENSMUST00000213114 Krtap19-2Q925I0 141 aa3.59□□□□□ -1.83
Ldlr-202ENSMUST00000213114 Fat4Q2PZL6 4981 aa3.54□□□□□ -1.84
Ldlr-202ENSMUST00000213114 Mt2P02798 61 aa3.54□□□□□ -1.84
Ldlr-202ENSMUST00000213114 Rnf213E9Q555 5152 aaKnown RBP3.54□□□□□ -1.84
Ldlr-202ENSMUST00000213114 ZanO88799 5376 aa3.53□□□□□ -1.85
Ldlr-202ENSMUST00000213114 Gm10061D3Z714 54 aa3.49□□□□□ -1.85
Ldlr-202ENSMUST00000213114 2310046K23RikA0A0A6YVW6 87 aa3.47□□□□□ -1.85
Ldlr-202ENSMUST00000213114 Krtap22-2J3QNX6 67 aa3.46□□□□□ -1.85
Ldlr-202ENSMUST00000213114 Gm10272F7CZ33 110 aa3.43□□□□□ -1.86
Ldlr-202ENSMUST00000213114 Sprr2gO70558 76 aa3.43□□□□□ -1.86
Ldlr-202ENSMUST00000213114 SspoQ8CG65 4998 aa3.4□□□□□ -1.87
Ldlr-202ENSMUST00000213114 Lce1iQ9D6P5 149 aa3.4□□□□□ -1.87
Ldlr-202ENSMUST00000213114 Lce3bQ9CQM7 98 aa3.39□□□□□ -1.87
Ldlr-202ENSMUST00000213114 Gm11569B1AQB1 180 aa3.38□□□□□ -1.87
Ldlr-202ENSMUST00000213114 Krtap17-1A2A5X6 109 aa3.37□□□□□ -1.87
Ldlr-202ENSMUST00000213114 Gm38119A0A0A6YX29 146 aa3.36□□□□□ -1.87
Ldlr-202ENSMUST00000213114 Lce1a2Q9D1K4 149 aa3.35□□□□□ -1.87
Ldlr-202ENSMUST00000213114 Gm10100J3QK64 120 aa3.34□□□□□ -1.88
Ldlr-202ENSMUST00000213114 Syne1Q6ZWR6 8799 aa3.33□□□□□ -1.88
Ldlr-202ENSMUST00000213114 Lce3cQ91V05 98 aa3.32□□□□□ -1.88
Ldlr-202ENSMUST00000213114 Gm10142J3KMP7 120 aa3.23□□□□□ -1.89
Ldlr-202ENSMUST00000213114 Krtap9-3Q3V2C1 136 aa3.23□□□□□ -1.89
Ldlr-202ENSMUST00000213114 Lce3eF8VQJ0 98 aa3.22□□□□□ -1.89
Ldlr-202ENSMUST00000213114 Lce3fQ6PAI4 98 aa3.22□□□□□ -1.89
Ldlr-202ENSMUST00000213114 Fsip2A2ARZ3 6995 aa3.21□□□□□ -1.9
Ldlr-202ENSMUST00000213114 Krtap4-6Q3V4B7 195 aa3.2□□□□□ -1.9
Ldlr-202ENSMUST00000213114 Lce1hQ9D6R3 140 aa3.2□□□□□ -1.9
Ldlr-202ENSMUST00000213114 Krtap4-2B1AQ85 167 aa3.2□□□□□ -1.9
Ldlr-202ENSMUST00000213114 Mt4P47945 62 aa3.16□□□□□ -1.9
Ldlr-202ENSMUST00000213114 Lce3dE9Q8V1 98 aa3.15□□□□□ -1.91
Ldlr-202ENSMUST00000213114 Sprr2iO70560 76 aa3.14□□□□□ -1.91
Ldlr-202ENSMUST00000213114 Lce1gQ9D195 139 aa3.14□□□□□ -1.91
Ldlr-202ENSMUST00000213114 Lce1bQ9D149 137 aa3.12□□□□□ -1.91
Ldlr-202ENSMUST00000213114 Lce3aQ497I5 98 aa3.1□□□□□ -1.91
Ldlr-202ENSMUST00000213114 Lce1fB9EJP6 147 aa3.1□□□□□ -1.91
Ldlr-202ENSMUST00000213114 Lce1cQ9D1C5 147 aa3.1□□□□□ -1.91
Ldlr-202ENSMUST00000213114 Lce1lQ9D1G7 135 aa3.1□□□□□ -1.91
Ldlr-202ENSMUST00000213114 Lce1dQ9D731 133 aa3.1□□□□□ -1.91
Ldlr-202ENSMUST00000213114 Muc16A0A140LJ72 8478 aa3.09□□□□□ -1.91
Retrieved 100 of 22,080 RNA–protein pairs in 62.9 ms