RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 Gm5965D3Z724 196 aa6.68□□□□□ -1.34
Prpf40a-206ENSMUST00000209364 Rpl37Q9D823 97 aa6.68□□□□□ -1.34
Prpf40a-206ENSMUST00000209364 Kiaa1109A2AAE1 5005 aa6.67□□□□□ -1.34
Prpf40a-206ENSMUST00000209364 Birc6O88738 4882 aa6.66□□□□□ -1.34
Prpf40a-206ENSMUST00000209364 Rnase13Q5GAM7 153 aa6.63□□□□□ -1.35
Prpf40a-206ENSMUST00000209364 Krtap15-1Q9QZU5 150 aa6.59□□□□□ -1.35
Prpf40a-206ENSMUST00000209364 Gm17606F6ZL36 78 aa6.58□□□□□ -1.36
Prpf40a-206ENSMUST00000209364 HydinQ80W93 5154 aa6.56□□□□□ -1.36
Prpf40a-206ENSMUST00000209364 Gm21887J3QQ04 176 aa6.53□□□□□ -1.36
Prpf40a-206ENSMUST00000209364 Gm9112A2AI92 75 aa6.49□□□□□ -1.37
Prpf40a-206ENSMUST00000209364 Lrp2A2ARV4 4660 aa6.42□□□□□ -1.38
Prpf40a-206ENSMUST00000209364 Gm17416Q30KP4 66 aa6.4□□□□□ -1.38
Prpf40a-206ENSMUST00000209364 Krtap7-1Q9D3I6 87 aa6.4□□□□□ -1.39
Prpf40a-206ENSMUST00000209364 PcloQ9QYX7 5068 aa6.37□□□□□ -1.39
Prpf40a-206ENSMUST00000209364 B930094E09RikQ8C4T2 136 aa6.34□□□□□ -1.39
Prpf40a-206ENSMUST00000209364 2310057N15RikQ9D6T8 200 aa6.34□□□□□ -1.39
Prpf40a-206ENSMUST00000209364 Gm19426M0QWC7 77 aa6.31□□□□□ -1.4
Prpf40a-206ENSMUST00000209364 Fam229aB2KGE5 128 aa6.25□□□□□ -1.41
Prpf40a-206ENSMUST00000209364 Gm19668J3QMD1 248 aa6.24□□□□□ -1.41
Prpf40a-206ENSMUST00000209364 Sec61bQ9CQS8 96 aaKnown RBP6.24□□□□□ -1.41
Prpf40a-206ENSMUST00000209364 2210017I01RikA0A0A6YVV1 95 aa6.23□□□□□ -1.41
Prpf40a-206ENSMUST00000209364 Krtap3-1A2A591 98 aa6.21□□□□□ -1.41
Prpf40a-206ENSMUST00000209364 Gm40193A0A1B0GT39 78 aa6.2□□□□□ -1.42
Prpf40a-206ENSMUST00000209364 Lce1mQ9CR91 182 aa6.15□□□□□ -1.43
Prpf40a-206ENSMUST00000209364 Herc1E9PZP8 4859 aa6.14□□□□□ -1.43
Prpf40a-206ENSMUST00000209364 Krtap13-1Q8K198 168 aa6.12□□□□□ -1.43
Prpf40a-206ENSMUST00000209364 Krtap1-5A2A590 122 aa6.02□□□□□ -1.45
Prpf40a-206ENSMUST00000209364 Krtap16-3Q8C1I6 86 aa6.02□□□□□ -1.45
Prpf40a-206ENSMUST00000209364 Crct1Q6PAI5 102 aa5.97□□□□□ -1.45
Prpf40a-206ENSMUST00000209364 BC029722A0A0N4SW31 51 aa5.96□□□□□ -1.46
Prpf40a-206ENSMUST00000209364 Krtap19-1Q925H2 87 aa5.96□□□□□ -1.46
Prpf40a-206ENSMUST00000209364 Ush2AQ2QI47 5193 aa5.93□□□□□ -1.46
Prpf40a-206ENSMUST00000209364 Gm10318A0A1W2P728 225 aa5.92□□□□□ -1.46
Prpf40a-206ENSMUST00000209364 Krtap19-3Q925H6 87 aa5.92□□□□□ -1.46
Prpf40a-206ENSMUST00000209364 Hmcn2A2AJ76 5100 aa5.9□□□□□ -1.46
Prpf40a-206ENSMUST00000209364 Gm18596A0A1W2P860 280 aa5.85□□□□□ -1.47
Prpf40a-206ENSMUST00000209364 Gm19402J3QJV4 266 aa5.84□□□□□ -1.48
Prpf40a-206ENSMUST00000209364 Gm17402F6Z0L5 76 aa5.83□□□□□ -1.48
Prpf40a-206ENSMUST00000209364 Gm9789Q8BIG3 52 aa5.8□□□□□ -1.48
Prpf40a-206ENSMUST00000209364 Ubr4A2AN08 5180 aa5.8□□□□□ -1.48
Prpf40a-206ENSMUST00000209364 Krtap1-3A2A588 173 aa5.8□□□□□ -1.48
Prpf40a-206ENSMUST00000209364 ZanO88799 5376 aa5.79□□□□□ -1.48
Prpf40a-206ENSMUST00000209364 Prm1P02319 51 aa5.75□□□□□ -1.49
Prpf40a-206ENSMUST00000209364 4932415D10RikA0A1W2P6U8 4986 aa5.75□□□□□ -1.49
Prpf40a-206ENSMUST00000209364 Gm7735D3YX18 52 aa5.71□□□□□ -1.5
Prpf40a-206ENSMUST00000209364 Camk2n1Q6QWF9 78 aa5.71□□□□□ -1.5
Prpf40a-206ENSMUST00000209364 Spink7Q6IE32 76 aa5.67□□□□□ -1.5
Prpf40a-206ENSMUST00000209364 Krtap1-4Q3V2D6 188 aa5.66□□□□□ -1.5
Prpf40a-206ENSMUST00000209364 LorP18165 486 aa5.65□□□□□ -1.51
Prpf40a-206ENSMUST00000209364 Sprr2a3Q4KL71 83 aa5.63□□□□□ -1.51
Prpf40a-206ENSMUST00000209364 Sprr2a1Q9CQK8 83 aa5.63□□□□□ -1.51
Prpf40a-206ENSMUST00000209364 Rnf213E9Q555 5152 aaKnown RBP5.61□□□□□ -1.51
Prpf40a-206ENSMUST00000209364 Fat4Q2PZL6 4981 aa5.57□□□□□ -1.52
Prpf40a-206ENSMUST00000209364 Lce1jD3YUU5 139 aa5.48□□□□□ -1.53
Prpf40a-206ENSMUST00000209364 Krtap12-1Q9Z287 130 aa5.46□□□□□ -1.54
Prpf40a-206ENSMUST00000209364 Tnp1P10856 55 aa5.42□□□□□ -1.54
Prpf40a-206ENSMUST00000209364 Krtap19-9aF8WH65 55 aa5.41□□□□□ -1.54
Prpf40a-206ENSMUST00000209364 SspoQ8CG65 4998 aa5.38□□□□□ -1.55
Prpf40a-206ENSMUST00000209364 Krtap17-1A2A5X6 109 aa5.28□□□□□ -1.56
Prpf40a-206ENSMUST00000209364 Krtap19-2Q925I0 141 aa5.26□□□□□ -1.57
Prpf40a-206ENSMUST00000209364 Krtap9-5A2A5X3 358 aa5.22□□□□□ -1.57
Prpf40a-206ENSMUST00000209364 Gm10061D3Z714 54 aa5.2□□□□□ -1.58
Prpf40a-206ENSMUST00000209364 A0A1Y7VJH8 109 aa5.16□□□□□ -1.58
Prpf40a-206ENSMUST00000209364 Lce1iQ9D6P5 149 aa5.15□□□□□ -1.59
Prpf40a-206ENSMUST00000209364 2310046K23RikA0A0A6YVW6 87 aa5.12□□□□□ -1.59
Prpf40a-206ENSMUST00000209364 Lce1a2Q9D1K4 149 aa5.1□□□□□ -1.59
Prpf40a-206ENSMUST00000209364 Krtap8-1O08633 61 aa5.02□□□□□ -1.61
Prpf40a-206ENSMUST00000209364 Muc5bE9Q5I3 4800 aa5.02□□□□□ -1.61
Prpf40a-206ENSMUST00000209364 Krtap28-10A0A1Y7VP58 119 aa4.99□□□□□ -1.61
Prpf40a-206ENSMUST00000209364 Krtap19-9bQ99NG9 58 aa4.96□□□□□ -1.61
Prpf40a-206ENSMUST00000209364 Gm6358A0A087WPH4 74 aa4.96□□□□□ -1.62
Prpf40a-206ENSMUST00000209364 Gm11569B1AQB1 180 aa4.91□□□□□ -1.62
Prpf40a-206ENSMUST00000209364 Mt2P02798 61 aa4.87□□□□□ -1.63
Prpf40a-206ENSMUST00000209364 A0A1Y7VLE6 161 aa4.75□□□□□ -1.65
Prpf40a-206ENSMUST00000209364 Krtap9-3Q3V2C1 136 aa4.73□□□□□ -1.65
Prpf40a-206ENSMUST00000209364 Lce1dQ9D731 133 aa4.72□□□□□ -1.65
Prpf40a-206ENSMUST00000209364 Krtap4-1Q3UUY3 169 aa4.71□□□□□ -1.66
Prpf40a-206ENSMUST00000209364 A030005L19RikA0A1Y7VIU2 113 aa4.7□□□□□ -1.66
Prpf40a-206ENSMUST00000209364 Lce1hQ9D6R3 140 aa4.68□□□□□ -1.66
Prpf40a-206ENSMUST00000209364 Krtap28-13A0A087WQP5 138 aa4.67□□□□□ -1.66
Prpf40a-206ENSMUST00000209364 4933428G20RikQ9D3X4 101 aa4.66□□□□□ -1.66
Prpf40a-206ENSMUST00000209364 Mdn1A2ANY6 5589 aaKnown RBP4.6□□□□□ -1.67
Prpf40a-206ENSMUST00000209364 Krtap22-2J3QNX6 67 aa4.6□□□□□ -1.67
Prpf40a-206ENSMUST00000209364 Gm7544A0A1Y7VJ58 118 aa4.58□□□□□ -1.68
Prpf40a-206ENSMUST00000209364 Krtap31-1Q9D644 177 aa4.58□□□□□ -1.68
Prpf40a-206ENSMUST00000209364 A030005K14RikA0A1Y7VNY1 122 aa4.58□□□□□ -1.68
Prpf40a-206ENSMUST00000209364 Sprr2gO70558 76 aa4.54□□□□□ -1.68
Prpf40a-206ENSMUST00000209364 Lce1eQ9D139 143 aa4.51□□□□□ -1.69
Prpf40a-206ENSMUST00000209364 Gm11938Q9D3H4 131 aa4.51□□□□□ -1.69
Prpf40a-206ENSMUST00000209364 Gm11555B1AQ89 175 aa4.47□□□□□ -1.69
Prpf40a-206ENSMUST00000209364 Krtap4-6Q3V4B7 195 aa4.47□□□□□ -1.69
Prpf40a-206ENSMUST00000209364 Lce1gQ9D195 139 aa4.43□□□□□ -1.7
Prpf40a-206ENSMUST00000209364 Krtap4-2B1AQ85 167 aa4.4□□□□□ -1.7
Prpf40a-206ENSMUST00000209364 Gm11563B1AQ90 168 aa4.4□□□□□ -1.71
Prpf40a-206ENSMUST00000209364 Krtap4-7Q9D732 168 aa4.4□□□□□ -1.71
Prpf40a-206ENSMUST00000209364 Sprr2dO70555 85 aa4.36□□□□□ -1.71
Prpf40a-206ENSMUST00000209364 Gm10272F7CZ33 110 aa4.33□□□□□ -1.72
Prpf40a-206ENSMUST00000209364 Gm11596B1AQB0 205 aa4.32□□□□□ -1.72
Prpf40a-206ENSMUST00000209364 Syne2Q6ZWQ0 6874 aaKnown RBP4.3□□□□□ -1.72
Prpf40a-206ENSMUST00000209364 Sprr2iO70560 76 aa4.29□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 92.8 ms