RNA–Protein interactions for RNA: ENSMUST00000172332.3

Ccdc71l-201, Transcript of Coiled-coil domain-containing 71-like, mousemouse

APPRIS P1 BASIC

Gene Ccdc71l, Length 4,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71l-201ENSMUST00000172332 Vps13dB1ART2 4390 aa7.57□□□□□ -1.2
Ccdc71l-201ENSMUST00000172332 Krtap3-1A2A591 98 aa7.53□□□□□ -1.2
Ccdc71l-201ENSMUST00000172332 Mycbp2Q7TPH6 4711 aa7.51□□□□□ -1.21
Ccdc71l-201ENSMUST00000172332 Dync2h1Q45VK7 4306 aa7.49□□□□□ -1.21
Ccdc71l-201ENSMUST00000172332 Dnah7aE9Q0T8 4024 aa7.49□□□□□ -1.21
Ccdc71l-201ENSMUST00000172332 Hectd4E9Q2E4 4418 aa7.47□□□□□ -1.21
Ccdc71l-201ENSMUST00000172332 Gm17402F6Z0L5 76 aa7.45□□□□□ -1.22
Ccdc71l-201ENSMUST00000172332 ApobE9Q414 4505 aa7.44□□□□□ -1.22
Ccdc71l-201ENSMUST00000172332 Kiaa1109A2AAE1 5005 aa7.41□□□□□ -1.22
Ccdc71l-201ENSMUST00000172332 Lrp1Q91ZX7 4545 aaKnown RBP7.38□□□□□ -1.23
Ccdc71l-201ENSMUST00000172332 Dnah2P0C6F1 4456 aa7.37□□□□□ -1.23
Ccdc71l-201ENSMUST00000172332 Herc2Q4U2R1 4836 aa7.36□□□□□ -1.23
Ccdc71l-201ENSMUST00000172332 Fat3Q8BNA6 4555 aa7.34□□□□□ -1.23
Ccdc71l-201ENSMUST00000172332 Vps13bQ80TY5 3993 aa7.32□□□□□ -1.24
Ccdc71l-201ENSMUST00000172332 Dync1h1Q9JHU4 4644 aaKnown RBP7.29□□□□□ -1.24
Ccdc71l-201ENSMUST00000172332 Gm19668J3QMD1 248 aa7.28□□□□□ -1.24
Ccdc71l-201ENSMUST00000172332 Lrp2A2ARV4 4660 aa7.28□□□□□ -1.24
Ccdc71l-201ENSMUST00000172332 Pkd1O08852 4293 aa7.24□□□□□ -1.25
Ccdc71l-201ENSMUST00000172332 Gm18596A0A1W2P860 280 aa7.24□□□□□ -1.25
Ccdc71l-201ENSMUST00000172332 Fat1A0A1L1SQU7 4645 aa7.24□□□□□ -1.25
Ccdc71l-201ENSMUST00000172332 SacsQ9JLC8 4582 aa7.17□□□□□ -1.26
Ccdc71l-201ENSMUST00000172332 Dnah8Q91XQ0 4731 aa7.05□□□□□ -1.28
Ccdc71l-201ENSMUST00000172332 Fat2Q5F226 4351 aa7.05□□□□□ -1.28
Ccdc71l-201ENSMUST00000172332 Ryr2E9Q401 4966 aaKnown RBP7□□□□□ -1.29
Ccdc71l-201ENSMUST00000172332 LorP18165 486 aa6.97□□□□□ -1.29
Ccdc71l-201ENSMUST00000172332 Krtap1-5A2A590 122 aa6.94□□□□□ -1.3
Ccdc71l-201ENSMUST00000172332 Gm19402J3QJV4 266 aa6.92□□□□□ -1.3
Ccdc71l-201ENSMUST00000172332 Abca13Q5SSE9 5034 aa6.92□□□□□ -1.3
Ccdc71l-201ENSMUST00000172332 Sprr2a3Q4KL71 83 aa6.89□□□□□ -1.31
Ccdc71l-201ENSMUST00000172332 Sprr2a1Q9CQK8 83 aa6.89□□□□□ -1.31
Ccdc71l-201ENSMUST00000172332 Krtap7-1Q9D3I6 87 aa6.89□□□□□ -1.31
Ccdc71l-201ENSMUST00000172332 Lce1mQ9CR91 182 aa6.89□□□□□ -1.31
Ccdc71l-201ENSMUST00000172332 Pkhd1E9PZ36 4059 aa6.87□□□□□ -1.31
Ccdc71l-201ENSMUST00000172332 Pkhd1l1Q80ZA4 4249 aa6.85□□□□□ -1.31
Ccdc71l-201ENSMUST00000172332 Dnhd1D3Z2X2 4750 aa6.78□□□□□ -1.32
Ccdc71l-201ENSMUST00000172332 Krtap1-4Q3V2D6 188 aa6.77□□□□□ -1.32
Ccdc71l-201ENSMUST00000172332 PcloQ9QYX7 5068 aa6.77□□□□□ -1.33
Ccdc71l-201ENSMUST00000172332 Kmt2cQ8BRH4 4903 aa6.71□□□□□ -1.34
Ccdc71l-201ENSMUST00000172332 Herc1E9PZP8 4859 aa6.7□□□□□ -1.34
Ccdc71l-201ENSMUST00000172332 Krtap19-9aF8WH65 55 aa6.69□□□□□ -1.34
Ccdc71l-201ENSMUST00000172332 4933428G20RikQ9D3X4 101 aa6.64□□□□□ -1.35
Ccdc71l-201ENSMUST00000172332 Ubr4A2AN08 5180 aa6.6□□□□□ -1.35
Ccdc71l-201ENSMUST00000172332 Gm6358A0A087WPH4 74 aa6.59□□□□□ -1.35
Ccdc71l-201ENSMUST00000172332 Krtap12-1Q9Z287 130 aa6.58□□□□□ -1.36
Ccdc71l-201ENSMUST00000172332 Birc6O88738 4882 aa6.55□□□□□ -1.36
Ccdc71l-201ENSMUST00000172332 Krtap16-3Q8C1I6 86 aa6.49□□□□□ -1.37
Ccdc71l-201ENSMUST00000172332 Mdn1A2ANY6 5589 aaKnown RBP6.48□□□□□ -1.37
Ccdc71l-201ENSMUST00000172332 Krtap19-3Q925H6 87 aa6.44□□□□□ -1.38
Ccdc71l-201ENSMUST00000172332 Krtap19-9bQ99NG9 58 aa6.43□□□□□ -1.38
Ccdc71l-201ENSMUST00000172332 Krtap8-1O08633 61 aa6.34□□□□□ -1.39
Ccdc71l-201ENSMUST00000172332 Krtap19-1Q925H2 87 aa6.33□□□□□ -1.4
Ccdc71l-201ENSMUST00000172332 Prm1P02319 51 aa6.33□□□□□ -1.4
Ccdc71l-201ENSMUST00000172332 Gm7735D3YX18 52 aa6.32□□□□□ -1.4
Ccdc71l-201ENSMUST00000172332 Krtap1-3A2A588 173 aa6.29□□□□□ -1.4
Ccdc71l-201ENSMUST00000172332 4932415D10RikA0A1W2P6U8 4986 aa6.27□□□□□ -1.4
Ccdc71l-201ENSMUST00000172332 Ush2AQ2QI47 5193 aa6.22□□□□□ -1.41
Ccdc71l-201ENSMUST00000172332 Rnf213E9Q555 5152 aaKnown RBP6.2□□□□□ -1.42
Ccdc71l-201ENSMUST00000172332 Krtap9-5A2A5X3 358 aa6.2□□□□□ -1.42
Ccdc71l-201ENSMUST00000172332 Syne1Q6ZWR6 8799 aa6.19□□□□□ -1.42
Ccdc71l-201ENSMUST00000172332 Gm9789Q8BIG3 52 aa6.18□□□□□ -1.42
Ccdc71l-201ENSMUST00000172332 Fat4Q2PZL6 4981 aa6.13□□□□□ -1.43
Ccdc71l-201ENSMUST00000172332 ZanO88799 5376 aa6.09□□□□□ -1.43
Ccdc71l-201ENSMUST00000172332 Lce1jD3YUU5 139 aa6.04□□□□□ -1.44
Ccdc71l-201ENSMUST00000172332 Hmcn2A2AJ76 5100 aa6.01□□□□□ -1.45
Ccdc71l-201ENSMUST00000172332 Sprr2kO70562 68 aa5.98□□□□□ -1.45
Ccdc71l-201ENSMUST00000172332 Muc16A0A140LJ72 8478 aa5.91□□□□□ -1.46
Ccdc71l-201ENSMUST00000172332 Gm10061D3Z714 54 aa5.89□□□□□ -1.47
Ccdc71l-201ENSMUST00000172332 Krtap19-2Q925I0 141 aa5.89□□□□□ -1.47
Ccdc71l-201ENSMUST00000172332 Mt2P02798 61 aa5.88□□□□□ -1.47
Ccdc71l-201ENSMUST00000172332 Gm10272F7CZ33 110 aa5.85□□□□□ -1.47
Ccdc71l-201ENSMUST00000172332 Gm11569B1AQB1 180 aa5.78□□□□□ -1.48
Ccdc71l-201ENSMUST00000172332 2310046K23RikA0A0A6YVW6 87 aa5.77□□□□□ -1.49
Ccdc71l-201ENSMUST00000172332 Krtap17-1A2A5X6 109 aa5.76□□□□□ -1.49
Ccdc71l-201ENSMUST00000172332 Gm10100J3QK64 120 aa5.74□□□□□ -1.49
Ccdc71l-201ENSMUST00000172332 Krtap22-2J3QNX6 67 aa5.73□□□□□ -1.49
Ccdc71l-201ENSMUST00000172332 Fsip2A2ARZ3 6995 aa5.69□□□□□ -1.5
Ccdc71l-201ENSMUST00000172332 Lce3bQ9CQM7 98 aa5.66□□□□□ -1.5
Ccdc71l-201ENSMUST00000172332 Lce3cQ91V05 98 aa5.63□□□□□ -1.51
Ccdc71l-201ENSMUST00000172332 Gm38119A0A0A6YX29 146 aa5.58□□□□□ -1.52
Ccdc71l-201ENSMUST00000172332 Krtap4-2B1AQ85 167 aa5.55□□□□□ -1.52
Ccdc71l-201ENSMUST00000172332 Sprr2gO70558 76 aa5.53□□□□□ -1.52
Ccdc71l-201ENSMUST00000172332 Krtap4-6Q3V4B7 195 aa5.53□□□□□ -1.52
Ccdc71l-201ENSMUST00000172332 Lce1iQ9D6P5 149 aa5.53□□□□□ -1.52
Ccdc71l-201ENSMUST00000172332 Gm10142J3KMP7 120 aa5.52□□□□□ -1.53
Ccdc71l-201ENSMUST00000172332 Krtap9-3Q3V2C1 136 aa5.5□□□□□ -1.53
Ccdc71l-201ENSMUST00000172332 Lce3eF8VQJ0 98 aa5.49□□□□□ -1.53
Ccdc71l-201ENSMUST00000172332 Lce3fQ6PAI4 98 aa5.49□□□□□ -1.53
Ccdc71l-201ENSMUST00000172332 Lce1a2Q9D1K4 149 aa5.46□□□□□ -1.54
Ccdc71l-201ENSMUST00000172332 Lce1gQ9D195 139 aa5.38□□□□□ -1.55
Ccdc71l-201ENSMUST00000172332 Mt4P47945 62 aa5.37□□□□□ -1.55
Ccdc71l-201ENSMUST00000172332 Lce1hQ9D6R3 140 aa5.37□□□□□ -1.55
Ccdc71l-201ENSMUST00000172332 Lce3dE9Q8V1 98 aa5.31□□□□□ -1.56
Ccdc71l-201ENSMUST00000172332 Krtap4-1Q3UUY3 169 aa5.3□□□□□ -1.56
Ccdc71l-201ENSMUST00000172332 Lce3aQ497I5 98 aa5.28□□□□□ -1.56
Ccdc71l-201ENSMUST00000172332 Muc5bE9Q5I3 4800 aa5.25□□□□□ -1.57
Ccdc71l-201ENSMUST00000172332 Macf1Q9QXZ0 7354 aaKnown RBP5.25□□□□□ -1.57
Ccdc71l-201ENSMUST00000172332 Syne2Q6ZWQ0 6874 aaKnown RBP5.23□□□□□ -1.57
Ccdc71l-201ENSMUST00000172332 Gm11596B1AQB0 205 aa5.22□□□□□ -1.57
Ccdc71l-201ENSMUST00000172332 SspoQ8CG65 4998 aa5.2□□□□□ -1.58
Ccdc71l-201ENSMUST00000172332 Lce1bQ9D149 137 aa5.18□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms