RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 Lce1mQ9CR91 182 aa8.96□□□□□ -0.98
Hoxc4-202ENSMUST00000165375 Lrp2A2ARV4 4660 aa8.93□□□□□ -0.98
Hoxc4-202ENSMUST00000165375 Krtap15-1Q9QZU5 150 aa8.9□□□□□ -0.98
Hoxc4-202ENSMUST00000165375 Gm9955Q8CEJ8 102 aa8.87□□□□□ -0.99
Hoxc4-202ENSMUST00000165375 Rpl37Q9D823 97 aa8.86□□□□□ -0.99
Hoxc4-202ENSMUST00000165375 Rnase13Q5GAM7 153 aa8.74□□□□□ -1.01
Hoxc4-202ENSMUST00000165375 CriptO70333 101 aa8.74□□□□□ -1.01
Hoxc4-202ENSMUST00000165375 Herc1E9PZP8 4859 aa8.72□□□□□ -1.01
Hoxc4-202ENSMUST00000165375 Sec61bQ9CQS8 96 aaKnown RBP8.62□□□□□ -1.03
Hoxc4-202ENSMUST00000165375 Gm10382Q3V0T5 144 aa8.6□□□□□ -1.03
Hoxc4-202ENSMUST00000165375 Gm18596A0A1W2P860 280 aa8.59□□□□□ -1.03
Hoxc4-202ENSMUST00000165375 Gm17606F6ZL36 78 aa8.59□□□□□ -1.03
Hoxc4-202ENSMUST00000165375 Gm17416Q30KP4 66 aa8.56□□□□□ -1.04
Hoxc4-202ENSMUST00000165375 2310057N15RikQ9D6T8 200 aa8.53□□□□□ -1.04
Hoxc4-202ENSMUST00000165375 Ush2AQ2QI47 5193 aa8.41□□□□□ -1.06
Hoxc4-202ENSMUST00000165375 Prm1P02319 51 aa8.38□□□□□ -1.07
Hoxc4-202ENSMUST00000165375 Gm9789Q8BIG3 52 aa8.37□□□□□ -1.07
Hoxc4-202ENSMUST00000165375 Ndufaf8A2AMZ4 74 aa8.35□□□□□ -1.07
Hoxc4-202ENSMUST00000165375 Prm2P07978 107 aa8.34□□□□□ -1.07
Hoxc4-202ENSMUST00000165375 Hmcn2A2AJ76 5100 aa8.32□□□□□ -1.08
Hoxc4-202ENSMUST00000165375 Gm7735D3YX18 52 aa8.31□□□□□ -1.08
Hoxc4-202ENSMUST00000165375 Gm21887J3QQ04 176 aa8.3□□□□□ -1.08
Hoxc4-202ENSMUST00000165375 2210017I01RikA0A0A6YVV1 95 aa8.29□□□□□ -1.08
Hoxc4-202ENSMUST00000165375 Krtap3-1A2A591 98 aa8.25□□□□□ -1.09
Hoxc4-202ENSMUST00000165375 Fam229aB2KGE5 128 aa8.24□□□□□ -1.09
Hoxc4-202ENSMUST00000165375 Gm19426M0QWC7 77 aa8.24□□□□□ -1.09
Hoxc4-202ENSMUST00000165375 Krtap16-3Q8C1I6 86 aa8.23□□□□□ -1.09
Hoxc4-202ENSMUST00000165375 Crct1Q6PAI5 102 aa8.22□□□□□ -1.09
Hoxc4-202ENSMUST00000165375 Krtap13-1Q8K198 168 aa8.21□□□□□ -1.1
Hoxc4-202ENSMUST00000165375 Ubr4A2AN08 5180 aa8.19□□□□□ -1.1
Hoxc4-202ENSMUST00000165375 Krtap1-3A2A588 173 aa8.17□□□□□ -1.1
Hoxc4-202ENSMUST00000165375 Krtap19-1Q925H2 87 aa8.17□□□□□ -1.1
Hoxc4-202ENSMUST00000165375 B930094E09RikQ8C4T2 136 aa8.15□□□□□ -1.1
Hoxc4-202ENSMUST00000165375 Krtap19-3Q925H6 87 aa8.14□□□□□ -1.11
Hoxc4-202ENSMUST00000165375 Krtap7-1Q9D3I6 87 aa8.13□□□□□ -1.11
Hoxc4-202ENSMUST00000165375 4932415D10RikA0A1W2P6U8 4986 aa8.11□□□□□ -1.11
Hoxc4-202ENSMUST00000165375 Gm40193A0A1B0GT39 78 aa8.11□□□□□ -1.11
Hoxc4-202ENSMUST00000165375 Gm10318A0A1W2P728 225 aa8.08□□□□□ -1.12
Hoxc4-202ENSMUST00000165375 Krtap1-5A2A590 122 aa8.08□□□□□ -1.12
Hoxc4-202ENSMUST00000165375 ZanO88799 5376 aa8□□□□□ -1.13
Hoxc4-202ENSMUST00000165375 Gm19402J3QJV4 266 aa7.99□□□□□ -1.13
Hoxc4-202ENSMUST00000165375 Gm17402F6Z0L5 76 aa7.97□□□□□ -1.13
Hoxc4-202ENSMUST00000165375 LorP18165 486 aa7.93□□□□□ -1.14
Hoxc4-202ENSMUST00000165375 BC029722A0A0N4SW31 51 aa7.91□□□□□ -1.14
Hoxc4-202ENSMUST00000165375 Krtap1-4Q3V2D6 188 aa7.86□□□□□ -1.15
Hoxc4-202ENSMUST00000165375 Fat4Q2PZL6 4981 aa7.85□□□□□ -1.15
Hoxc4-202ENSMUST00000165375 Rnf213E9Q555 5152 aaKnown RBP7.85□□□□□ -1.15
Hoxc4-202ENSMUST00000165375 Gm9112A2AI92 75 aa7.74□□□□□ -1.17
Hoxc4-202ENSMUST00000165375 Gm19668J3QMD1 248 aa7.7□□□□□ -1.18
Hoxc4-202ENSMUST00000165375 Sprr2a3Q4KL71 83 aa7.58□□□□□ -1.2
Hoxc4-202ENSMUST00000165375 Sprr2a1Q9CQK8 83 aa7.58□□□□□ -1.2
Hoxc4-202ENSMUST00000165375 Spink7Q6IE32 76 aa7.53□□□□□ -1.2
Hoxc4-202ENSMUST00000165375 SspoQ8CG65 4998 aa7.52□□□□□ -1.21
Hoxc4-202ENSMUST00000165375 Gm10061D3Z714 54 aa7.46□□□□□ -1.21
Hoxc4-202ENSMUST00000165375 Krtap12-1Q9Z287 130 aa7.44□□□□□ -1.22
Hoxc4-202ENSMUST00000165375 Lce1jD3YUU5 139 aa7.43□□□□□ -1.22
Hoxc4-202ENSMUST00000165375 Krtap19-9aF8WH65 55 aa7.34□□□□□ -1.23
Hoxc4-202ENSMUST00000165375 Camk2n1Q6QWF9 78 aa7.31□□□□□ -1.24
Hoxc4-202ENSMUST00000165375 Krtap19-2Q925I0 141 aa7.27□□□□□ -1.25
Hoxc4-202ENSMUST00000165375 Krtap9-5A2A5X3 358 aa7.24□□□□□ -1.25
Hoxc4-202ENSMUST00000165375 A0A1Y7VJH8 109 aa7.23□□□□□ -1.25
Hoxc4-202ENSMUST00000165375 Krtap17-1A2A5X6 109 aa7.21□□□□□ -1.25
Hoxc4-202ENSMUST00000165375 Tnp1P10856 55 aa7.14□□□□□ -1.27
Hoxc4-202ENSMUST00000165375 Gm11569B1AQB1 180 aa7.13□□□□□ -1.27
Hoxc4-202ENSMUST00000165375 Muc5bE9Q5I3 4800 aa7□□□□□ -1.29
Hoxc4-202ENSMUST00000165375 Lce1iQ9D6P5 149 aa6.98□□□□□ -1.29
Hoxc4-202ENSMUST00000165375 Gm6358A0A087WPH4 74 aa6.89□□□□□ -1.31
Hoxc4-202ENSMUST00000165375 Lce1a2Q9D1K4 149 aa6.88□□□□□ -1.31
Hoxc4-202ENSMUST00000165375 Krtap28-10A0A1Y7VP58 119 aa6.87□□□□□ -1.31
Hoxc4-202ENSMUST00000165375 2310046K23RikA0A0A6YVW6 87 aa6.79□□□□□ -1.32
Hoxc4-202ENSMUST00000165375 Krtap4-1Q3UUY3 169 aa6.79□□□□□ -1.32
Hoxc4-202ENSMUST00000165375 Mt2P02798 61 aa6.69□□□□□ -1.34
Hoxc4-202ENSMUST00000165375 Krtap8-1O08633 61 aa6.64□□□□□ -1.35
Hoxc4-202ENSMUST00000165375 A0A1Y7VLE6 161 aa6.62□□□□□ -1.35
Hoxc4-202ENSMUST00000165375 Krtap4-2B1AQ85 167 aa6.62□□□□□ -1.35
Hoxc4-202ENSMUST00000165375 Lce1gQ9D195 139 aa6.62□□□□□ -1.35
Hoxc4-202ENSMUST00000165375 Krtap19-9bQ99NG9 58 aa6.61□□□□□ -1.35
Hoxc4-202ENSMUST00000165375 Gm11555B1AQ89 175 aa6.58□□□□□ -1.36
Hoxc4-202ENSMUST00000165375 Mdn1A2ANY6 5589 aaKnown RBP6.52□□□□□ -1.36
Hoxc4-202ENSMUST00000165375 Gm7544A0A1Y7VJ58 118 aa6.52□□□□□ -1.37
Hoxc4-202ENSMUST00000165375 Krtap4-6Q3V4B7 195 aa6.5□□□□□ -1.37
Hoxc4-202ENSMUST00000165375 A030005L19RikA0A1Y7VIU2 113 aa6.49□□□□□ -1.37
Hoxc4-202ENSMUST00000165375 Gm11562A0PK51 136 aa6.48□□□□□ -1.37
Hoxc4-202ENSMUST00000165375 Gm11596B1AQB0 205 aa6.41□□□□□ -1.38
Hoxc4-202ENSMUST00000165375 Krtap28-13A0A087WQP5 138 aa6.4□□□□□ -1.38
Hoxc4-202ENSMUST00000165375 Syne2Q6ZWQ0 6874 aaKnown RBP6.38□□□□□ -1.39
Hoxc4-202ENSMUST00000165375 Gm11563B1AQ90 168 aa6.36□□□□□ -1.39
Hoxc4-202ENSMUST00000165375 Krtap4-7Q9D732 168 aa6.36□□□□□ -1.39
Hoxc4-202ENSMUST00000165375 Krtap22-2J3QNX6 67 aa6.35□□□□□ -1.39
Hoxc4-202ENSMUST00000165375 A030005K14RikA0A1Y7VNY1 122 aa6.34□□□□□ -1.4
Hoxc4-202ENSMUST00000165375 Gm11564A2A4L9 201 aa6.21□□□□□ -1.42
Hoxc4-202ENSMUST00000165375 Gm11595B1AQA7 289 aa6.21□□□□□ -1.42
Hoxc4-202ENSMUST00000165375 Krtap4-8B1AQA8 209 aa6.21□□□□□ -1.42
Hoxc4-202ENSMUST00000165375 Krtap9-3Q3V2C1 136 aa6.18□□□□□ -1.42
Hoxc4-202ENSMUST00000165375 Lce1hQ9D6R3 140 aa6.13□□□□□ -1.43
Hoxc4-202ENSMUST00000165375 4933428G20RikQ9D3X4 101 aa6.1□□□□□ -1.43
Hoxc4-202ENSMUST00000165375 Krtap4-9B1AQA9 244 aa6.04□□□□□ -1.44
Hoxc4-202ENSMUST00000165375 Mt4P47945 62 aa6.03□□□□□ -1.44
Hoxc4-202ENSMUST00000165375 Lce1dQ9D731 133 aa6.02□□□□□ -1.45
Hoxc4-202ENSMUST00000165375 Sprr2gO70558 76 aa6.02□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 135.3 ms