RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Crct1Q6PAI5 102 aa6.02□□□□□ -1.45
Pcdh1-202ENSMUST00000159405 Dync2h1Q45VK7 4306 aa6.02□□□□□ -1.45
Pcdh1-202ENSMUST00000159405 Lrp1Q91ZX7 4545 aaKnown RBP6.01□□□□□ -1.45
Pcdh1-202ENSMUST00000159405 Krtap19-5O08632 62 aa5.99□□□□□ -1.45
Pcdh1-202ENSMUST00000159405 Pkd1O08852 4293 aa5.98□□□□□ -1.45
Pcdh1-202ENSMUST00000159405 HydinQ80W93 5154 aa5.98□□□□□ -1.45
Pcdh1-202ENSMUST00000159405 Ryr3A2AGL3 4863 aa5.97□□□□□ -1.45
Pcdh1-202ENSMUST00000159405 SacsQ9JLC8 4582 aa5.96□□□□□ -1.46
Pcdh1-202ENSMUST00000159405 Camk2n1Q6QWF9 78 aa5.9□□□□□ -1.47
Pcdh1-202ENSMUST00000159405 Gm17416Q30KP4 66 aa5.89□□□□□ -1.47
Pcdh1-202ENSMUST00000159405 2210017I01RikA0A0A6YVV1 95 aa5.88□□□□□ -1.47
Pcdh1-202ENSMUST00000159405 Mycbp2Q7TPH6 4711 aa5.87□□□□□ -1.47
Pcdh1-202ENSMUST00000159405 Fat2Q5F226 4351 aa5.85□□□□□ -1.47
Pcdh1-202ENSMUST00000159405 Fat3Q8BNA6 4555 aa5.85□□□□□ -1.47
Pcdh1-202ENSMUST00000159405 Dync1h1Q9JHU4 4644 aaKnown RBP5.84□□□□□ -1.48
Pcdh1-202ENSMUST00000159405 Gm19402J3QJV4 266 aa5.81□□□□□ -1.48
Pcdh1-202ENSMUST00000159405 Pkhd1E9PZ36 4059 aa5.79□□□□□ -1.48
Pcdh1-202ENSMUST00000159405 Krtap13-1Q8K198 168 aa5.76□□□□□ -1.49
Pcdh1-202ENSMUST00000159405 Fat1A0A1L1SQU7 4645 aa5.71□□□□□ -1.5
Pcdh1-202ENSMUST00000159405 Kiaa1109A2AAE1 5005 aa5.7□□□□□ -1.5
Pcdh1-202ENSMUST00000159405 Gm17402F6Z0L5 76 aa5.7□□□□□ -1.5
Pcdh1-202ENSMUST00000159405 Lrp2A2ARV4 4660 aa5.67□□□□□ -1.5
Pcdh1-202ENSMUST00000159405 Pkhd1l1Q80ZA4 4249 aa5.65□□□□□ -1.5
Pcdh1-202ENSMUST00000159405 Herc2Q4U2R1 4836 aa5.6□□□□□ -1.51
Pcdh1-202ENSMUST00000159405 Tnp1P10856 55 aa5.52□□□□□ -1.53
Pcdh1-202ENSMUST00000159405 Sprr2a3Q4KL71 83 aa5.51□□□□□ -1.53
Pcdh1-202ENSMUST00000159405 Sprr2a1Q9CQK8 83 aa5.51□□□□□ -1.53
Pcdh1-202ENSMUST00000159405 Dnah8Q91XQ0 4731 aa5.49□□□□□ -1.53
Pcdh1-202ENSMUST00000159405 Gm18596A0A1W2P860 280 aa5.38□□□□□ -1.55
Pcdh1-202ENSMUST00000159405 LorP18165 486 aa5.37□□□□□ -1.55
Pcdh1-202ENSMUST00000159405 Abca13Q5SSE9 5034 aa5.36□□□□□ -1.55
Pcdh1-202ENSMUST00000159405 Krtap1-5A2A590 122 aa5.33□□□□□ -1.56
Pcdh1-202ENSMUST00000159405 Kmt2cQ8BRH4 4903 aa5.21□□□□□ -1.57
Pcdh1-202ENSMUST00000159405 Dnhd1D3Z2X2 4750 aa5.19□□□□□ -1.58
Pcdh1-202ENSMUST00000159405 PcloQ9QYX7 5068 aa5.19□□□□□ -1.58
Pcdh1-202ENSMUST00000159405 Ryr2E9Q401 4966 aaKnown RBP5.19□□□□□ -1.58
Pcdh1-202ENSMUST00000159405 Ubr4A2AN08 5180 aa5.16□□□□□ -1.58
Pcdh1-202ENSMUST00000159405 Mdn1A2ANY6 5589 aaKnown RBP5.15□□□□□ -1.58
Pcdh1-202ENSMUST00000159405 Herc1E9PZP8 4859 aa5.14□□□□□ -1.59
Pcdh1-202ENSMUST00000159405 Birc6O88738 4882 aa5.09□□□□□ -1.59
Pcdh1-202ENSMUST00000159405 Krtap1-4Q3V2D6 188 aa5.04□□□□□ -1.6
Pcdh1-202ENSMUST00000159405 Lce1mQ9CR91 182 aa5.03□□□□□ -1.6
Pcdh1-202ENSMUST00000159405 Krtap16-3Q8C1I6 86 aa4.99□□□□□ -1.61
Pcdh1-202ENSMUST00000159405 Krtap19-3Q925H6 87 aa4.93□□□□□ -1.62
Pcdh1-202ENSMUST00000159405 2310046K23RikA0A0A6YVW6 87 aa4.89□□□□□ -1.63
Pcdh1-202ENSMUST00000159405 Fat4Q2PZL6 4981 aa4.89□□□□□ -1.63
Pcdh1-202ENSMUST00000159405 Krtap12-1Q9Z287 130 aa4.85□□□□□ -1.63
Pcdh1-202ENSMUST00000159405 Krtap19-9aF8WH65 55 aa4.84□□□□□ -1.64
Pcdh1-202ENSMUST00000159405 Gm6358A0A087WPH4 74 aa4.83□□□□□ -1.64
Pcdh1-202ENSMUST00000159405 Krtap19-1Q925H2 87 aa4.83□□□□□ -1.64
Pcdh1-202ENSMUST00000159405 Rnf213E9Q555 5152 aaKnown RBP4.82□□□□□ -1.64
Pcdh1-202ENSMUST00000159405 Hmcn2A2AJ76 5100 aa4.8□□□□□ -1.64
Pcdh1-202ENSMUST00000159405 Lce1jD3YUU5 139 aa4.79□□□□□ -1.64
Pcdh1-202ENSMUST00000159405 4932415D10RikA0A1W2P6U8 4986 aa4.78□□□□□ -1.64
Pcdh1-202ENSMUST00000159405 ZanO88799 5376 aa4.75□□□□□ -1.65
Pcdh1-202ENSMUST00000159405 Ush2AQ2QI47 5193 aa4.75□□□□□ -1.65
Pcdh1-202ENSMUST00000159405 Krtap1-3A2A588 173 aa4.74□□□□□ -1.65
Pcdh1-202ENSMUST00000159405 Krtap9-5A2A5X3 358 aa4.73□□□□□ -1.65
Pcdh1-202ENSMUST00000159405 Syne1Q6ZWR6 8799 aa4.73□□□□□ -1.65
Pcdh1-202ENSMUST00000159405 Krtap19-9bQ99NG9 58 aa4.72□□□□□ -1.65
Pcdh1-202ENSMUST00000159405 4933428G20RikQ9D3X4 101 aa4.72□□□□□ -1.65
Pcdh1-202ENSMUST00000159405 Krtap8-1O08633 61 aa4.72□□□□□ -1.65
Pcdh1-202ENSMUST00000159405 Krtap9-3Q3V2C1 136 aa4.66□□□□□ -1.66
Pcdh1-202ENSMUST00000159405 Muc16A0A140LJ72 8478 aa4.63□□□□□ -1.67
Pcdh1-202ENSMUST00000159405 Gm7735D3YX18 52 aa4.61□□□□□ -1.67
Pcdh1-202ENSMUST00000159405 Lce1dQ9D731 133 aa4.57□□□□□ -1.68
Pcdh1-202ENSMUST00000159405 Prm1P02319 51 aa4.57□□□□□ -1.68
Pcdh1-202ENSMUST00000159405 Krtap17-1A2A5X6 109 aa4.55□□□□□ -1.68
Pcdh1-202ENSMUST00000159405 Lce1hQ9D6R3 140 aa4.55□□□□□ -1.68
Pcdh1-202ENSMUST00000159405 Sprr2kO70562 68 aa4.51□□□□□ -1.69
Pcdh1-202ENSMUST00000159405 Gm9789Q8BIG3 52 aa4.5□□□□□ -1.69
Pcdh1-202ENSMUST00000159405 Krtap19-2Q925I0 141 aa4.49□□□□□ -1.69
Pcdh1-202ENSMUST00000159405 Fsip2A2ARZ3 6995 aa4.48□□□□□ -1.69
Pcdh1-202ENSMUST00000159405 Lce1iQ9D6P5 149 aa4.44□□□□□ -1.7
Pcdh1-202ENSMUST00000159405 Lce1a2Q9D1K4 149 aa4.44□□□□□ -1.7
Pcdh1-202ENSMUST00000159405 Mt2P02798 61 aa4.42□□□□□ -1.7
Pcdh1-202ENSMUST00000159405 Gm10061D3Z714 54 aa4.37□□□□□ -1.71
Pcdh1-202ENSMUST00000159405 Sprr2gO70558 76 aa4.36□□□□□ -1.71
Pcdh1-202ENSMUST00000159405 Lce1eQ9D139 143 aa4.35□□□□□ -1.71
Pcdh1-202ENSMUST00000159405 Gm11938Q9D3H4 131 aa4.34□□□□□ -1.72
Pcdh1-202ENSMUST00000159405 Gm38119A0A0A6YX29 146 aa4.3□□□□□ -1.72
Pcdh1-202ENSMUST00000159405 Gm11569B1AQB1 180 aa4.29□□□□□ -1.72
Pcdh1-202ENSMUST00000159405 Gm10272F7CZ33 110 aa4.29□□□□□ -1.72
Pcdh1-202ENSMUST00000159405 Krtap31-1Q9D644 177 aa4.26□□□□□ -1.73
Pcdh1-202ENSMUST00000159405 Macf1Q9QXZ0 7354 aaKnown RBP4.26□□□□□ -1.73
Pcdh1-202ENSMUST00000159405 Gm10100J3QK64 120 aa4.26□□□□□ -1.73
Pcdh1-202ENSMUST00000159405 Krtap22-2J3QNX6 67 aa4.23□□□□□ -1.73
Pcdh1-202ENSMUST00000159405 Krtap4-6Q3V4B7 195 aa4.15□□□□□ -1.75
Pcdh1-202ENSMUST00000159405 Gm10142J3KMP7 120 aa4.15□□□□□ -1.75
Pcdh1-202ENSMUST00000159405 Sprr2dO70555 85 aa4.14□□□□□ -1.75
Pcdh1-202ENSMUST00000159405 Syne2Q6ZWQ0 6874 aaKnown RBP4.14□□□□□ -1.75
Pcdh1-202ENSMUST00000159405 Lce1cQ9D1C5 147 aa4.12□□□□□ -1.75
Pcdh1-202ENSMUST00000159405 Lce3bQ9CQM7 98 aa4.11□□□□□ -1.75
Pcdh1-202ENSMUST00000159405 SspoQ8CG65 4998 aa4.07□□□□□ -1.76
Pcdh1-202ENSMUST00000159405 Krtap4-2B1AQ85 167 aa4.06□□□□□ -1.76
Pcdh1-202ENSMUST00000159405 Mt4P47945 62 aa4.06□□□□□ -1.76
Pcdh1-202ENSMUST00000159405 Lce3cQ91V05 98 aa4.04□□□□□ -1.76
Pcdh1-202ENSMUST00000159405 Sprr2iO70560 76 aa4.01□□□□□ -1.77
Pcdh1-202ENSMUST00000159405 Lce3dE9Q8V1 98 aa4□□□□□ -1.77
Pcdh1-202ENSMUST00000159405 Lce1fB9EJP6 147 aa3.98□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 1044.9 ms