RNA–Protein interactions for RNA: ENSMUST00000117601.7

Limch1-203, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 5 BASIC

Gene Limch1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-203ENSMUST00000117601 Krtap15-1Q9QZU5 150 aa4.45□□□□□ -1.7
Limch1-203ENSMUST00000117601 2310057N15RikQ9D6T8 200 aa4.44□□□□□ -1.7
Limch1-203ENSMUST00000117601 Dnhd1D3Z2X2 4750 aa4.43□□□□□ -1.7
Limch1-203ENSMUST00000117601 Gm20537G3UYK7 97 aa4.43□□□□□ -1.7
Limch1-203ENSMUST00000117601 Gm5767A0A0J9YTU8 78 aa4.43□□□□□ -1.7
Limch1-203ENSMUST00000117601 D6Ertd527eA0A0N4SWI3 464 aa4.43□□□□□ -1.7
Limch1-203ENSMUST00000117601 2310079G19RikQ9D6L6 185 aa4.41□□□□□ -1.7
Limch1-203ENSMUST00000117601 Krtap17-1A2A5X6 109 aa4.37□□□□□ -1.71
Limch1-203ENSMUST00000117601 A930033H14RikG5E8X6 103 aa4.37□□□□□ -1.71
Limch1-203ENSMUST00000117601 4930507D05RikQ8C9C9 103 aa4.33□□□□□ -1.72
Limch1-203ENSMUST00000117601 Herc1E9PZP8 4859 aa4.31□□□□□ -1.72
Limch1-203ENSMUST00000117601 Rpl37Q9D823 97 aa4.29□□□□□ -1.72
Limch1-203ENSMUST00000117601 Gm10382Q3V0T5 144 aa4.25□□□□□ -1.73
Limch1-203ENSMUST00000117601 Gm10318A0A1W2P728 225 aa4.23□□□□□ -1.73
Limch1-203ENSMUST00000117601 Crct1Q6PAI5 102 aa4.2□□□□□ -1.74
Limch1-203ENSMUST00000117601 B930094E09RikQ8C4T2 136 aa4.19□□□□□ -1.74
Limch1-203ENSMUST00000117601 Cox6b2Q80ZN9 88 aa4.18□□□□□ -1.74
Limch1-203ENSMUST00000117601 Ubr4A2AN08 5180 aa4.14□□□□□ -1.75
Limch1-203ENSMUST00000117601 Lce1mQ9CR91 182 aa4.13□□□□□ -1.75
Limch1-203ENSMUST00000117601 Gm9955Q8CEJ8 102 aa4.13□□□□□ -1.75
Limch1-203ENSMUST00000117601 Krtap4-1Q3UUY3 169 aa4.11□□□□□ -1.75
Limch1-203ENSMUST00000117601 Gm17416Q30KP4 66 aa4.1□□□□□ -1.75
Limch1-203ENSMUST00000117601 Ush2AQ2QI47 5193 aa4.1□□□□□ -1.75
Limch1-203ENSMUST00000117601 Gm17606F6ZL36 78 aa4.09□□□□□ -1.76
Limch1-203ENSMUST00000117601 Krtap3-1A2A591 98 aa4.08□□□□□ -1.76
Limch1-203ENSMUST00000117601 Camk2n1Q6QWF9 78 aa4.08□□□□□ -1.76
Limch1-203ENSMUST00000117601 Krtap13-1Q8K198 168 aa4.08□□□□□ -1.76
Limch1-203ENSMUST00000117601 Krtap7-1Q9D3I6 87 aa4.08□□□□□ -1.76
Limch1-203ENSMUST00000117601 ZanO88799 5376 aa4.04□□□□□ -1.76
Limch1-203ENSMUST00000117601 2210017I01RikA0A0A6YVV1 95 aa4.04□□□□□ -1.76
Limch1-203ENSMUST00000117601 Krtap16-3Q8C1I6 86 aa4.03□□□□□ -1.76
Limch1-203ENSMUST00000117601 Gm18596A0A1W2P860 280 aa4.03□□□□□ -1.76
Limch1-203ENSMUST00000117601 Fam229aB2KGE5 128 aa4.02□□□□□ -1.77
Limch1-203ENSMUST00000117601 Hmcn2A2AJ76 5100 aa4.02□□□□□ -1.77
Limch1-203ENSMUST00000117601 Gm19668J3QMD1 248 aa4□□□□□ -1.77
Limch1-203ENSMUST00000117601 Gm40193A0A1B0GT39 78 aa3.97□□□□□ -1.77
Limch1-203ENSMUST00000117601 Krtap19-1Q925H2 87 aa3.97□□□□□ -1.77
Limch1-203ENSMUST00000117601 Fat4Q2PZL6 4981 aa3.97□□□□□ -1.77
Limch1-203ENSMUST00000117601 Krtap19-3Q925H6 87 aa3.96□□□□□ -1.77
Limch1-203ENSMUST00000117601 4932415D10RikA0A1W2P6U8 4986 aa3.95□□□□□ -1.78
Limch1-203ENSMUST00000117601 Krtap1-3A2A588 173 aa3.92□□□□□ -1.78
Limch1-203ENSMUST00000117601 Krtap1-5A2A590 122 aa3.91□□□□□ -1.78
Limch1-203ENSMUST00000117601 LorP18165 486 aa3.9□□□□□ -1.79
Limch1-203ENSMUST00000117601 BC029722A0A0N4SW31 51 aa3.89□□□□□ -1.79
Limch1-203ENSMUST00000117601 Gm19426M0QWC7 77 aa3.88□□□□□ -1.79
Limch1-203ENSMUST00000117601 Rnf213E9Q555 5152 aaKnown RBP3.86□□□□□ -1.79
Limch1-203ENSMUST00000117601 Gm19402J3QJV4 266 aa3.86□□□□□ -1.79
Limch1-203ENSMUST00000117601 Gm9789Q8BIG3 52 aa3.85□□□□□ -1.79
Limch1-203ENSMUST00000117601 Gm11555B1AQ89 175 aa3.82□□□□□ -1.8
Limch1-203ENSMUST00000117601 Gm11562A0PK51 136 aa3.82□□□□□ -1.8
Limch1-203ENSMUST00000117601 Gm11563B1AQ90 168 aa3.82□□□□□ -1.8
Limch1-203ENSMUST00000117601 Krtap4-7Q9D732 168 aa3.82□□□□□ -1.8
Limch1-203ENSMUST00000117601 Gm7735D3YX18 52 aa3.81□□□□□ -1.8
Limch1-203ENSMUST00000117601 Spink7Q6IE32 76 aa3.81□□□□□ -1.8
Limch1-203ENSMUST00000117601 Prm1P02319 51 aa3.77□□□□□ -1.81
Limch1-203ENSMUST00000117601 Lce1jD3YUU5 139 aa3.73□□□□□ -1.81
Limch1-203ENSMUST00000117601 Krtap1-4Q3V2D6 188 aa3.73□□□□□ -1.81
Limch1-203ENSMUST00000117601 Krtap31-1Q9D644 177 aa3.71□□□□□ -1.82
Limch1-203ENSMUST00000117601 Sprr2a3Q4KL71 83 aa3.65□□□□□ -1.83
Limch1-203ENSMUST00000117601 Sprr2a1Q9CQK8 83 aa3.65□□□□□ -1.83
Limch1-203ENSMUST00000117601 Krtap12-1Q9Z287 130 aa3.62□□□□□ -1.83
Limch1-203ENSMUST00000117601 Gm17402F6Z0L5 76 aa3.59□□□□□ -1.83
Limch1-203ENSMUST00000117601 SspoQ8CG65 4998 aa3.55□□□□□ -1.84
Limch1-203ENSMUST00000117601 Krtap19-9aF8WH65 55 aa3.55□□□□□ -1.84
Limch1-203ENSMUST00000117601 Krtap9-5A2A5X3 358 aa3.54□□□□□ -1.84
Limch1-203ENSMUST00000117601 Krtap31-2Q8CAY5 177 aa3.53□□□□□ -1.84
Limch1-203ENSMUST00000117601 Krtap19-2Q925I0 141 aa3.52□□□□□ -1.85
Limch1-203ENSMUST00000117601 Gm10061D3Z714 54 aa3.5□□□□□ -1.85
Limch1-203ENSMUST00000117601 Lce1iQ9D6P5 149 aa3.48□□□□□ -1.85
Limch1-203ENSMUST00000117601 Lce1a2Q9D1K4 149 aa3.45□□□□□ -1.86
Limch1-203ENSMUST00000117601 Krtap4-2B1AQ85 167 aa3.43□□□□□ -1.86
Limch1-203ENSMUST00000117601 Mdn1A2ANY6 5589 aaKnown RBP3.4□□□□□ -1.87
Limch1-203ENSMUST00000117601 Gm11569B1AQB1 180 aa3.35□□□□□ -1.87
Limch1-203ENSMUST00000117601 Tnp1P10856 55 aa3.35□□□□□ -1.87
Limch1-203ENSMUST00000117601 Muc5bE9Q5I3 4800 aa3.34□□□□□ -1.87
Limch1-203ENSMUST00000117601 Gm6358A0A087WPH4 74 aa3.33□□□□□ -1.88
Limch1-203ENSMUST00000117601 Mt2P02798 61 aa3.27□□□□□ -1.89
Limch1-203ENSMUST00000117601 Lce1gQ9D195 139 aa3.26□□□□□ -1.89
Limch1-203ENSMUST00000117601 Krtap9-3Q3V2C1 136 aa3.25□□□□□ -1.89
Limch1-203ENSMUST00000117601 Krtap8-1O08633 61 aa3.24□□□□□ -1.89
Limch1-203ENSMUST00000117601 Krtap19-9bQ99NG9 58 aa3.23□□□□□ -1.89
Limch1-203ENSMUST00000117601 Syne2Q6ZWQ0 6874 aaKnown RBP3.19□□□□□ -1.9
Limch1-203ENSMUST00000117601 Lce1hQ9D6R3 140 aa3.18□□□□□ -1.9
Limch1-203ENSMUST00000117601 A0A1Y7VJH8 109 aa3.15□□□□□ -1.91
Limch1-203ENSMUST00000117601 2310046K23RikA0A0A6YVW6 87 aa3.14□□□□□ -1.91
Limch1-203ENSMUST00000117601 Krtap4-6Q3V4B7 195 aa3.1□□□□□ -1.91
Limch1-203ENSMUST00000117601 Gm11596B1AQB0 205 aa3.09□□□□□ -1.92
Limch1-203ENSMUST00000117601 A0A1Y7VLE6 161 aa3.06□□□□□ -1.92
Limch1-203ENSMUST00000117601 Fsip2A2ARZ3 6995 aa3.06□□□□□ -1.92
Limch1-203ENSMUST00000117601 Krtap22-2J3QNX6 67 aa3.05□□□□□ -1.92
Limch1-203ENSMUST00000117601 Krtap28-13A0A087WQP5 138 aa3.04□□□□□ -1.92
Limch1-203ENSMUST00000117601 Krtap28-10A0A1Y7VP58 119 aa3.02□□□□□ -1.93
Limch1-203ENSMUST00000117601 A030005K14RikA0A1Y7VNY1 122 aa3.02□□□□□ -1.93
Limch1-203ENSMUST00000117601 Gm10272F7CZ33 110 aa2.94□□□□□ -1.94
Limch1-203ENSMUST00000117601 4933428G20RikQ9D3X4 101 aa2.94□□□□□ -1.94
Limch1-203ENSMUST00000117601 Gm11564A2A4L9 201 aa2.92□□□□□ -1.94
Limch1-203ENSMUST00000117601 Gm11595B1AQA7 289 aa2.92□□□□□ -1.94
Limch1-203ENSMUST00000117601 Krtap4-8B1AQA8 209 aa2.92□□□□□ -1.94
Limch1-203ENSMUST00000117601 Mt4P47945 62 aa2.9□□□□□ -1.94
Limch1-203ENSMUST00000117601 Lce1dQ9D731 133 aa2.88□□□□□ -1.95
Retrieved 100 of 22,080 RNA–protein pairs in 70.5 ms