RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Gm12216A0A1W2P827 62 aa12.05□□□□□ -0.48
Ubp1-203ENSMUST00000116492 Herc2Q4U2R1 4836 aa11.99□□□□□ -0.49
Ubp1-203ENSMUST00000116492 Kiaa1109A2AAE1 5005 aa11.98□□□□□ -0.49
Ubp1-203ENSMUST00000116492 Birc6O88738 4882 aa11.92□□□□□ -0.5
Ubp1-203ENSMUST00000116492 HydinQ80W93 5154 aa11.78□□□□□ -0.52
Ubp1-203ENSMUST00000116492 Krtap13-1Q8K198 168 aa11.72□□□□□ -0.53
Ubp1-203ENSMUST00000116492 Sec61bQ9CQS8 96 aaKnown RBP11.72□□□□□ -0.53
Ubp1-203ENSMUST00000116492 Romo1P60603 79 aa11.69□□□□□ -0.54
Ubp1-203ENSMUST00000116492 Lrp2A2ARV4 4660 aa11.68□□□□□ -0.54
Ubp1-203ENSMUST00000116492 BC029722A0A0N4SW31 51 aa11.65□□□□□ -0.54
Ubp1-203ENSMUST00000116492 2310057N15RikQ9D6T8 200 aa11.6□□□□□ -0.55
Ubp1-203ENSMUST00000116492 Krtap1-5A2A590 122 aa11.51□□□□□ -0.57
Ubp1-203ENSMUST00000116492 CriptO70333 101 aa11.5□□□□□ -0.57
Ubp1-203ENSMUST00000116492 B930094E09RikQ8C4T2 136 aa11.5□□□□□ -0.57
Ubp1-203ENSMUST00000116492 Gm20538F6Z9R1 75 aa11.42□□□□□ -0.58
Ubp1-203ENSMUST00000116492 Gm19426M0QWC7 77 aa11.41□□□□□ -0.58
Ubp1-203ENSMUST00000116492 Mp68P56379 58 aa11.4□□□□□ -0.58
Ubp1-203ENSMUST00000116492 Gm17402F6Z0L5 76 aa11.39□□□□□ -0.59
Ubp1-203ENSMUST00000116492 Fam229aB2KGE5 128 aa11.32□□□□□ -0.6
Ubp1-203ENSMUST00000116492 PcloQ9QYX7 5068 aa11.31□□□□□ -0.6
Ubp1-203ENSMUST00000116492 Gm21887J3QQ04 176 aa11.29□□□□□ -0.6
Ubp1-203ENSMUST00000116492 Krtap16-3Q8C1I6 86 aa11.26□□□□□ -0.61
Ubp1-203ENSMUST00000116492 Krtap19-1Q925H2 87 aa11.12□□□□□ -0.63
Ubp1-203ENSMUST00000116492 Crct1Q6PAI5 102 aa11.06□□□□□ -0.64
Ubp1-203ENSMUST00000116492 Sprr2a3Q4KL71 83 aa11.05□□□□□ -0.64
Ubp1-203ENSMUST00000116492 Sprr2a1Q9CQK8 83 aa11.05□□□□□ -0.64
Ubp1-203ENSMUST00000116492 Krtap19-3Q925H6 87 aa11.03□□□□□ -0.64
Ubp1-203ENSMUST00000116492 Gm10318A0A1W2P728 225 aa11.01□□□□□ -0.65
Ubp1-203ENSMUST00000116492 Gm19402J3QJV4 266 aa11.01□□□□□ -0.65
Ubp1-203ENSMUST00000116492 Lce1mQ9CR91 182 aa11.01□□□□□ -0.65
Ubp1-203ENSMUST00000116492 Spink7Q6IE32 76 aa10.99□□□□□ -0.65
Ubp1-203ENSMUST00000116492 Herc1E9PZP8 4859 aa10.95□□□□□ -0.66
Ubp1-203ENSMUST00000116492 Krtap1-4Q3V2D6 188 aa10.78□□□□□ -0.68
Ubp1-203ENSMUST00000116492 Krtap7-1Q9D3I6 87 aa10.75□□□□□ -0.69
Ubp1-203ENSMUST00000116492 Gm18596A0A1W2P860 280 aa10.69□□□□□ -0.7
Ubp1-203ENSMUST00000116492 Gm40193A0A1B0GT39 78 aa10.64□□□□□ -0.71
Ubp1-203ENSMUST00000116492 Krtap1-3A2A588 173 aa10.58□□□□□ -0.72
Ubp1-203ENSMUST00000116492 ZanO88799 5376 aa10.56□□□□□ -0.72
Ubp1-203ENSMUST00000116492 4932415D10RikA0A1W2P6U8 4986 aa10.55□□□□□ -0.72
Ubp1-203ENSMUST00000116492 Ush2AQ2QI47 5193 aa10.54□□□□□ -0.72
Ubp1-203ENSMUST00000116492 Hmcn2A2AJ76 5100 aa10.54□□□□□ -0.72
Ubp1-203ENSMUST00000116492 Ndufaf8A2AMZ4 74 aa10.52□□□□□ -0.73
Ubp1-203ENSMUST00000116492 Camk2n1Q6QWF9 78 aa10.48□□□□□ -0.73
Ubp1-203ENSMUST00000116492 Ubr4A2AN08 5180 aa10.39□□□□□ -0.75
Ubp1-203ENSMUST00000116492 Gm19668J3QMD1 248 aa10.38□□□□□ -0.75
Ubp1-203ENSMUST00000116492 Gm9789Q8BIG3 52 aa10.35□□□□□ -0.75
Ubp1-203ENSMUST00000116492 Lce1jD3YUU5 139 aa10.32□□□□□ -0.76
Ubp1-203ENSMUST00000116492 Krtap12-1Q9Z287 130 aa10.3□□□□□ -0.76
Ubp1-203ENSMUST00000116492 LorP18165 486 aa10.29□□□□□ -0.76
Ubp1-203ENSMUST00000116492 Krtap19-9aF8WH65 55 aa10.27□□□□□ -0.77
Ubp1-203ENSMUST00000116492 Fat4Q2PZL6 4981 aa10.24□□□□□ -0.77
Ubp1-203ENSMUST00000116492 Prm1P02319 51 aa10.2□□□□□ -0.78
Ubp1-203ENSMUST00000116492 Gm7735D3YX18 52 aa10.15□□□□□ -0.79
Ubp1-203ENSMUST00000116492 Prm2P07978 107 aa10.15□□□□□ -0.79
Ubp1-203ENSMUST00000116492 Rnf213E9Q555 5152 aaKnown RBP10.14□□□□□ -0.79
Ubp1-203ENSMUST00000116492 Tnp1P10856 55 aa9.83□□□□□ -0.84
Ubp1-203ENSMUST00000116492 SspoQ8CG65 4998 aa9.78□□□□□ -0.84
Ubp1-203ENSMUST00000116492 Krtap17-1A2A5X6 109 aa9.77□□□□□ -0.84
Ubp1-203ENSMUST00000116492 Krtap8-1O08633 61 aa9.77□□□□□ -0.85
Ubp1-203ENSMUST00000116492 Krtap19-2Q925I0 141 aa9.76□□□□□ -0.85
Ubp1-203ENSMUST00000116492 Lce1iQ9D6P5 149 aa9.7□□□□□ -0.86
Ubp1-203ENSMUST00000116492 Krtap9-5A2A5X3 358 aa9.67□□□□□ -0.86
Ubp1-203ENSMUST00000116492 Krtap19-9bQ99NG9 58 aa9.62□□□□□ -0.87
Ubp1-203ENSMUST00000116492 Lce1a2Q9D1K4 149 aa9.61□□□□□ -0.87
Ubp1-203ENSMUST00000116492 Gm9112A2AI92 75 aa9.61□□□□□ -0.87
Ubp1-203ENSMUST00000116492 2310046K23RikA0A0A6YVW6 87 aa9.35□□□□□ -0.91
Ubp1-203ENSMUST00000116492 Gm10061D3Z714 54 aa9.32□□□□□ -0.92
Ubp1-203ENSMUST00000116492 Muc5bE9Q5I3 4800 aa9.16□□□□□ -0.94
Ubp1-203ENSMUST00000116492 Gm6358A0A087WPH4 74 aa9.15□□□□□ -0.94
Ubp1-203ENSMUST00000116492 Krtap9-3Q3V2C1 136 aa9.15□□□□□ -0.94
Ubp1-203ENSMUST00000116492 Mt2P02798 61 aa9.11□□□□□ -0.95
Ubp1-203ENSMUST00000116492 Lce1hQ9D6R3 140 aa9.08□□□□□ -0.96
Ubp1-203ENSMUST00000116492 Gm11569B1AQB1 180 aa8.76□□□□□ -1.01
Ubp1-203ENSMUST00000116492 Krtap22-2J3QNX6 67 aa8.59□□□□□ -1.03
Ubp1-203ENSMUST00000116492 Krtap4-2B1AQ85 167 aa8.42□□□□□ -1.06
Ubp1-203ENSMUST00000116492 Gm11562A0PK51 136 aa8.38□□□□□ -1.07
Ubp1-203ENSMUST00000116492 Lce1dQ9D731 133 aa8.38□□□□□ -1.07
Ubp1-203ENSMUST00000116492 Sprr2gO70558 76 aa8.37□□□□□ -1.07
Ubp1-203ENSMUST00000116492 Lce1gQ9D195 139 aa8.32□□□□□ -1.08
Ubp1-203ENSMUST00000116492 Gm10272F7CZ33 110 aa8.3□□□□□ -1.08
Ubp1-203ENSMUST00000116492 Syne2Q6ZWQ0 6874 aaKnown RBP8.25□□□□□ -1.09
Ubp1-203ENSMUST00000116492 Sprr2dO70555 85 aa8.25□□□□□ -1.09
Ubp1-203ENSMUST00000116492 Mdn1A2ANY6 5589 aaKnown RBP8.22□□□□□ -1.09
Ubp1-203ENSMUST00000116492 Gm11555B1AQ89 175 aa8.18□□□□□ -1.1
Ubp1-203ENSMUST00000116492 4933428G20RikQ9D3X4 101 aa8.18□□□□□ -1.1
Ubp1-203ENSMUST00000116492 Lce1eQ9D139 143 aa8.13□□□□□ -1.11
Ubp1-203ENSMUST00000116492 Gm11938Q9D3H4 131 aa8.12□□□□□ -1.11
Ubp1-203ENSMUST00000116492 Krtap4-6Q3V4B7 195 aa8.06□□□□□ -1.12
Ubp1-203ENSMUST00000116492 Gm11596B1AQB0 205 aa8.05□□□□□ -1.12
Ubp1-203ENSMUST00000116492 Krtap4-1Q3UUY3 169 aa7.9□□□□□ -1.14
Ubp1-203ENSMUST00000116492 Lce1cQ9D1C5 147 aa7.79□□□□□ -1.16
Ubp1-203ENSMUST00000116492 Krtap19-4Q925H7 84 aa7.78□□□□□ -1.16
Ubp1-203ENSMUST00000116492 Gm11564A2A4L9 201 aa7.7□□□□□ -1.18
Ubp1-203ENSMUST00000116492 Gm11563B1AQ90 168 aa7.7□□□□□ -1.18
Ubp1-203ENSMUST00000116492 Gm11595B1AQA7 289 aa7.7□□□□□ -1.18
Ubp1-203ENSMUST00000116492 Krtap4-8B1AQA8 209 aa7.7□□□□□ -1.18
Ubp1-203ENSMUST00000116492 Lce3bQ9CQM7 98 aa7.62□□□□□ -1.19
Ubp1-203ENSMUST00000116492 Fsip2A2ARZ3 6995 aa7.58□□□□□ -1.2
Ubp1-203ENSMUST00000116492 Syne1Q6ZWR6 8799 aa7.57□□□□□ -1.2
Ubp1-203ENSMUST00000116492 Gm10100J3QK64 120 aa7.56□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms