RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Gm12216A0A1W2P827 62 aa12,05□□□□□ -0,48
Ubp1-203ENSMUST00000116492 Herc2Q4U2R1 4836 aa11,99□□□□□ -0,49
Ubp1-203ENSMUST00000116492 Kiaa1109A2AAE1 5005 aa11,98□□□□□ -0,49
Ubp1-203ENSMUST00000116492 Birc6O88738 4882 aa11,92□□□□□ -0,5
Ubp1-203ENSMUST00000116492 HydinQ80W93 5154 aa11,78□□□□□ -0,52
Ubp1-203ENSMUST00000116492 Krtap13-1Q8K198 168 aa11,72□□□□□ -0,53
Ubp1-203ENSMUST00000116492 Sec61bQ9CQS8 96 aaKnown RBP11,72□□□□□ -0,53
Ubp1-203ENSMUST00000116492 Romo1P60603 79 aa11,69□□□□□ -0,54
Ubp1-203ENSMUST00000116492 Lrp2A2ARV4 4660 aa11,68□□□□□ -0,54
Ubp1-203ENSMUST00000116492 BC029722A0A0N4SW31 51 aa11,65□□□□□ -0,54
Ubp1-203ENSMUST00000116492 2310057N15RikQ9D6T8 200 aa11,6□□□□□ -0,55
Ubp1-203ENSMUST00000116492 Krtap1-5A2A590 122 aa11,51□□□□□ -0,57
Ubp1-203ENSMUST00000116492 CriptO70333 101 aa11,5□□□□□ -0,57
Ubp1-203ENSMUST00000116492 B930094E09RikQ8C4T2 136 aa11,5□□□□□ -0,57
Ubp1-203ENSMUST00000116492 Gm20538F6Z9R1 75 aa11,42□□□□□ -0,58
Ubp1-203ENSMUST00000116492 Gm19426M0QWC7 77 aa11,41□□□□□ -0,58
Ubp1-203ENSMUST00000116492 Mp68P56379 58 aa11,4□□□□□ -0,58
Ubp1-203ENSMUST00000116492 Gm17402F6Z0L5 76 aa11,39□□□□□ -0,59
Ubp1-203ENSMUST00000116492 Fam229aB2KGE5 128 aa11,32□□□□□ -0,6
Ubp1-203ENSMUST00000116492 PcloQ9QYX7 5068 aa11,31□□□□□ -0,6
Ubp1-203ENSMUST00000116492 Gm21887J3QQ04 176 aa11,29□□□□□ -0,6
Ubp1-203ENSMUST00000116492 Krtap16-3Q8C1I6 86 aa11,26□□□□□ -0,61
Ubp1-203ENSMUST00000116492 Krtap19-1Q925H2 87 aa11,12□□□□□ -0,63
Ubp1-203ENSMUST00000116492 Crct1Q6PAI5 102 aa11,06□□□□□ -0,64
Ubp1-203ENSMUST00000116492 Sprr2a3Q4KL71 83 aa11,05□□□□□ -0,64
Ubp1-203ENSMUST00000116492 Sprr2a1Q9CQK8 83 aa11,05□□□□□ -0,64
Ubp1-203ENSMUST00000116492 Krtap19-3Q925H6 87 aa11,03□□□□□ -0,64
Ubp1-203ENSMUST00000116492 Gm10318A0A1W2P728 225 aa11,01□□□□□ -0,65
Ubp1-203ENSMUST00000116492 Gm19402J3QJV4 266 aa11,01□□□□□ -0,65
Ubp1-203ENSMUST00000116492 Lce1mQ9CR91 182 aa11,01□□□□□ -0,65
Ubp1-203ENSMUST00000116492 Spink7Q6IE32 76 aa10,99□□□□□ -0,65
Ubp1-203ENSMUST00000116492 Herc1E9PZP8 4859 aa10,95□□□□□ -0,66
Ubp1-203ENSMUST00000116492 Krtap1-4Q3V2D6 188 aa10,78□□□□□ -0,68
Ubp1-203ENSMUST00000116492 Krtap7-1Q9D3I6 87 aa10,75□□□□□ -0,69
Ubp1-203ENSMUST00000116492 Gm18596A0A1W2P860 280 aa10,69□□□□□ -0,7
Ubp1-203ENSMUST00000116492 Gm40193A0A1B0GT39 78 aa10,64□□□□□ -0,71
Ubp1-203ENSMUST00000116492 Krtap1-3A2A588 173 aa10,58□□□□□ -0,72
Ubp1-203ENSMUST00000116492 ZanO88799 5376 aa10,56□□□□□ -0,72
Ubp1-203ENSMUST00000116492 4932415D10RikA0A1W2P6U8 4986 aa10,55□□□□□ -0,72
Ubp1-203ENSMUST00000116492 Ush2AQ2QI47 5193 aa10,54□□□□□ -0,72
Ubp1-203ENSMUST00000116492 Hmcn2A2AJ76 5100 aa10,54□□□□□ -0,72
Ubp1-203ENSMUST00000116492 Ndufaf8A2AMZ4 74 aa10,52□□□□□ -0,73
Ubp1-203ENSMUST00000116492 Camk2n1Q6QWF9 78 aa10,48□□□□□ -0,73
Ubp1-203ENSMUST00000116492 Ubr4A2AN08 5180 aa10,39□□□□□ -0,75
Ubp1-203ENSMUST00000116492 Gm19668J3QMD1 248 aa10,38□□□□□ -0,75
Ubp1-203ENSMUST00000116492 Gm9789Q8BIG3 52 aa10,35□□□□□ -0,75
Ubp1-203ENSMUST00000116492 Lce1jD3YUU5 139 aa10,32□□□□□ -0,76
Ubp1-203ENSMUST00000116492 Krtap12-1Q9Z287 130 aa10,3□□□□□ -0,76
Ubp1-203ENSMUST00000116492 LorP18165 486 aa10,29□□□□□ -0,76
Ubp1-203ENSMUST00000116492 Krtap19-9aF8WH65 55 aa10,27□□□□□ -0,77
Ubp1-203ENSMUST00000116492 Fat4Q2PZL6 4981 aa10,24□□□□□ -0,77
Ubp1-203ENSMUST00000116492 Prm1P02319 51 aa10,2□□□□□ -0,78
Ubp1-203ENSMUST00000116492 Gm7735D3YX18 52 aa10,15□□□□□ -0,79
Ubp1-203ENSMUST00000116492 Prm2P07978 107 aa10,15□□□□□ -0,79
Ubp1-203ENSMUST00000116492 Rnf213E9Q555 5152 aaKnown RBP10,14□□□□□ -0,79
Ubp1-203ENSMUST00000116492 Tnp1P10856 55 aa9,83□□□□□ -0,84
Ubp1-203ENSMUST00000116492 SspoQ8CG65 4998 aa9,78□□□□□ -0,84
Ubp1-203ENSMUST00000116492 Krtap17-1A2A5X6 109 aa9,77□□□□□ -0,84
Ubp1-203ENSMUST00000116492 Krtap8-1O08633 61 aa9,77□□□□□ -0,85
Ubp1-203ENSMUST00000116492 Krtap19-2Q925I0 141 aa9,76□□□□□ -0,85
Ubp1-203ENSMUST00000116492 Lce1iQ9D6P5 149 aa9,7□□□□□ -0,86
Ubp1-203ENSMUST00000116492 Krtap9-5A2A5X3 358 aa9,67□□□□□ -0,86
Ubp1-203ENSMUST00000116492 Krtap19-9bQ99NG9 58 aa9,62□□□□□ -0,87
Ubp1-203ENSMUST00000116492 Lce1a2Q9D1K4 149 aa9,61□□□□□ -0,87
Ubp1-203ENSMUST00000116492 Gm9112A2AI92 75 aa9,61□□□□□ -0,87
Ubp1-203ENSMUST00000116492 2310046K23RikA0A0A6YVW6 87 aa9,35□□□□□ -0,91
Ubp1-203ENSMUST00000116492 Gm10061D3Z714 54 aa9,32□□□□□ -0,92
Ubp1-203ENSMUST00000116492 Muc5bE9Q5I3 4800 aa9,16□□□□□ -0,94
Ubp1-203ENSMUST00000116492 Gm6358A0A087WPH4 74 aa9,15□□□□□ -0,94
Ubp1-203ENSMUST00000116492 Krtap9-3Q3V2C1 136 aa9,15□□□□□ -0,94
Ubp1-203ENSMUST00000116492 Mt2P02798 61 aa9,11□□□□□ -0,95
Ubp1-203ENSMUST00000116492 Lce1hQ9D6R3 140 aa9,08□□□□□ -0,96
Ubp1-203ENSMUST00000116492 Gm11569B1AQB1 180 aa8,76□□□□□ -1,01
Ubp1-203ENSMUST00000116492 Krtap22-2J3QNX6 67 aa8,59□□□□□ -1,03
Ubp1-203ENSMUST00000116492 Krtap4-2B1AQ85 167 aa8,42□□□□□ -1,06
Ubp1-203ENSMUST00000116492 Gm11562A0PK51 136 aa8,38□□□□□ -1,07
Ubp1-203ENSMUST00000116492 Lce1dQ9D731 133 aa8,38□□□□□ -1,07
Ubp1-203ENSMUST00000116492 Sprr2gO70558 76 aa8,37□□□□□ -1,07
Ubp1-203ENSMUST00000116492 Lce1gQ9D195 139 aa8,32□□□□□ -1,08
Ubp1-203ENSMUST00000116492 Gm10272F7CZ33 110 aa8,3□□□□□ -1,08
Ubp1-203ENSMUST00000116492 Syne2Q6ZWQ0 6874 aaKnown RBP8,25□□□□□ -1,09
Ubp1-203ENSMUST00000116492 Sprr2dO70555 85 aa8,25□□□□□ -1,09
Ubp1-203ENSMUST00000116492 Mdn1A2ANY6 5589 aaKnown RBP8,22□□□□□ -1,09
Ubp1-203ENSMUST00000116492 Gm11555B1AQ89 175 aa8,18□□□□□ -1,1
Ubp1-203ENSMUST00000116492 4933428G20RikQ9D3X4 101 aa8,18□□□□□ -1,1
Ubp1-203ENSMUST00000116492 Lce1eQ9D139 143 aa8,13□□□□□ -1,11
Ubp1-203ENSMUST00000116492 Gm11938Q9D3H4 131 aa8,12□□□□□ -1,11
Ubp1-203ENSMUST00000116492 Krtap4-6Q3V4B7 195 aa8,06□□□□□ -1,12
Ubp1-203ENSMUST00000116492 Gm11596B1AQB0 205 aa8,05□□□□□ -1,12
Ubp1-203ENSMUST00000116492 Krtap4-1Q3UUY3 169 aa7,9□□□□□ -1,14
Ubp1-203ENSMUST00000116492 Lce1cQ9D1C5 147 aa7,79□□□□□ -1,16
Ubp1-203ENSMUST00000116492 Krtap19-4Q925H7 84 aa7,78□□□□□ -1,16
Ubp1-203ENSMUST00000116492 Gm11564A2A4L9 201 aa7,7□□□□□ -1,18
Ubp1-203ENSMUST00000116492 Gm11563B1AQ90 168 aa7,7□□□□□ -1,18
Ubp1-203ENSMUST00000116492 Gm11595B1AQA7 289 aa7,7□□□□□ -1,18
Ubp1-203ENSMUST00000116492 Krtap4-8B1AQA8 209 aa7,7□□□□□ -1,18
Ubp1-203ENSMUST00000116492 Lce3bQ9CQM7 98 aa7,62□□□□□ -1,19
Ubp1-203ENSMUST00000116492 Fsip2A2ARZ3 6995 aa7,58□□□□□ -1,2
Ubp1-203ENSMUST00000116492 Syne1Q6ZWR6 8799 aa7,57□□□□□ -1,2
Ubp1-203ENSMUST00000116492 Gm10100J3QK64 120 aa7,56□□□□□ -1,2
Retrieved 100 of 22,080 RNA–protein pairs in 10,7 ms